BLASTX nr result
ID: Jatropha_contig00006487
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Jatropha_contig00006487 (581 letters) Database: NCBI-nr (updated 2014/02/11) 35,149,712 sequences; 12,374,887,350 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 127 2e-27 ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su... 125 1e-26 gb|ESQ55196.1| hypothetical protein EUTSA_v10024251mg [Eutrema s... 124 1e-26 ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II su... 124 1e-26 gb|EMJ15758.1| hypothetical protein PRUPE_ppa000425mg [Prunus pe... 124 1e-26 gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus... 123 3e-26 gb|EOY28253.1| DNA-directed RNA polymerase family protein isofor... 123 4e-26 ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca... 122 5e-26 gb|EEE85647.2| hypothetical protein POPTR_0004s04320g [Populus t... 122 6e-26 ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su... 122 6e-26 ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 122 6e-26 gb|ESR36834.1| hypothetical protein CICLE_v10027701mg [Citrus cl... 121 1e-25 ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 121 1e-25 ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 121 1e-25 dbj|BAD44440.1| DNA-directed RNA polymerase II second largest ch... 120 2e-25 gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 120 2e-25 ref|XP_006285577.1| hypothetical protein CARUB_v10007021mg [Caps... 120 3e-25 ref|XP_002867829.1| hypothetical protein ARALYDRAFT_492703 [Arab... 120 3e-25 ref|XP_002305136.1| predicted protein [Populus trichocarpa] 120 3e-25 gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh... 120 3e-25 >ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] Length = 1194 Score = 127 bits (320), Expect = 2e-27 Identities = 65/88 (73%), Positives = 70/88 (79%), Gaps = 1/88 (1%) Frame = -1 Query: 542 MDDEHEYDQPLNXXXXXXXXXXXXXD-AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 366 M+D+ EYDQ LN + AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI Sbjct: 1 MEDDQEYDQNLNEDYEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60 Query: 365 VDESADIEIRPESQHNPGHQPDFAEVLW 282 VDESADIEIRPESQHNPGHQ DFAE ++ Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIY 88 >ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer arietinum] Length = 1194 Score = 125 bits (313), Expect = 1e-26 Identities = 64/87 (73%), Positives = 69/87 (79%) Frame = -1 Query: 542 MDDEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 363 +D+E EYDQ + DAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV Sbjct: 3 LDEEQEYDQQM-MDEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 61 Query: 362 DESADIEIRPESQHNPGHQPDFAEVLW 282 DESADIEIRPESQHNPGHQ DFAE ++ Sbjct: 62 DESADIEIRPESQHNPGHQSDFAETIY 88 >gb|ESQ55196.1| hypothetical protein EUTSA_v10024251mg [Eutrema salsugineum] Length = 1188 Score = 124 bits (312), Expect = 1e-26 Identities = 63/85 (74%), Positives = 67/85 (78%) Frame = -1 Query: 536 DEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 357 D +EY+Q N DAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE Sbjct: 2 DYNEYEQEPNYVEDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 61 Query: 356 SADIEIRPESQHNPGHQPDFAEVLW 282 SADIEIRPESQHNPGHQ DFAE ++ Sbjct: 62 SADIEIRPESQHNPGHQSDFAETIY 86 >ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Fragaria vesca subsp. vesca] Length = 1191 Score = 124 bits (312), Expect = 1e-26 Identities = 62/87 (71%), Positives = 69/87 (79%) Frame = -1 Query: 542 MDDEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 363 M++E EY++ N AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV Sbjct: 1 MEEEPEYEEQYNDDDDEDEITQED--AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 58 Query: 362 DESADIEIRPESQHNPGHQPDFAEVLW 282 DE+ADIEIRPESQHNPGHQPDFAE ++ Sbjct: 59 DEAADIEIRPESQHNPGHQPDFAETIY 85 >gb|EMJ15758.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica] Length = 1192 Score = 124 bits (312), Expect = 1e-26 Identities = 65/87 (74%), Positives = 67/87 (77%) Frame = -1 Query: 542 MDDEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 363 MD+E EYD DAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV Sbjct: 1 MDEEPEYDD--QQYNDDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 58 Query: 362 DESADIEIRPESQHNPGHQPDFAEVLW 282 DESADIEIRPESQHNPGHQPDFAE + Sbjct: 59 DESADIEIRPESQHNPGHQPDFAETTY 85 >gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris] Length = 1194 Score = 123 bits (309), Expect = 3e-26 Identities = 63/87 (72%), Positives = 69/87 (79%) Frame = -1 Query: 542 MDDEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 363 +++E EYDQ + DAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV Sbjct: 3 LEEEQEYDQQM-MEEEDDEDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 61 Query: 362 DESADIEIRPESQHNPGHQPDFAEVLW 282 DESADIEIRPESQHNPGHQ DFAE ++ Sbjct: 62 DESADIEIRPESQHNPGHQSDFAETIY 88 >gb|EOY28253.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma cacao] Length = 1189 Score = 123 bits (308), Expect = 4e-26 Identities = 64/87 (73%), Positives = 68/87 (78%) Frame = -1 Query: 542 MDDEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 363 M+D+ EYD L DAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV Sbjct: 1 MEDDSEYDPQL--MDDEDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 58 Query: 362 DESADIEIRPESQHNPGHQPDFAEVLW 282 DESADIEIRPESQHNPGHQ DFAE ++ Sbjct: 59 DESADIEIRPESQHNPGHQSDFAETIY 85 >ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula] gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase [Medicago truncatula] Length = 1213 Score = 122 bits (307), Expect = 5e-26 Identities = 61/87 (70%), Positives = 69/87 (79%) Frame = -1 Query: 542 MDDEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 363 +++E+E+DQ + AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV Sbjct: 5 LEEENEFDQQMEEEDDEEEITQED--AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 62 Query: 362 DESADIEIRPESQHNPGHQPDFAEVLW 282 DESADIEIRPESQHNPGHQ DFAE ++ Sbjct: 63 DESADIEIRPESQHNPGHQSDFAETIY 89 >gb|EEE85647.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa] Length = 1215 Score = 122 bits (306), Expect = 6e-26 Identities = 65/92 (70%), Positives = 69/92 (75%), Gaps = 5/92 (5%) Frame = -1 Query: 542 MDDEHEYDQ-PLNXXXXXXXXXXXXXD----AWAVISAYFEEKGLVRQQLDSFDEFIQNT 378 M+D EYDQ P+N AWAVISAYFEEKGLVRQQLDSFDEFIQNT Sbjct: 1 MEDLDEYDQQPMNEDMEPEEEDADEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNT 60 Query: 377 MQEIVDESADIEIRPESQHNPGHQPDFAEVLW 282 MQEIVDESADIEIRPESQHNPGHQ DFAE ++ Sbjct: 61 MQEIVDESADIEIRPESQHNPGHQSDFAETIY 92 >ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine max] Length = 1193 Score = 122 bits (306), Expect = 6e-26 Identities = 62/87 (71%), Positives = 69/87 (79%) Frame = -1 Query: 542 MDDEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 363 +++E EYD+ + DAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV Sbjct: 3 LEEEQEYDEQM-MEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 61 Query: 362 DESADIEIRPESQHNPGHQPDFAEVLW 282 DESADIEIRPESQHNPGHQ DFAE ++ Sbjct: 62 DESADIEIRPESQHNPGHQSDFAETIY 88 >ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine max] Length = 1192 Score = 122 bits (306), Expect = 6e-26 Identities = 62/87 (71%), Positives = 69/87 (79%) Frame = -1 Query: 542 MDDEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 363 +++E EYD+ + DAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV Sbjct: 3 LEEEQEYDEQM-MEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 61 Query: 362 DESADIEIRPESQHNPGHQPDFAEVLW 282 DESADIEIRPESQHNPGHQ DFAE ++ Sbjct: 62 DESADIEIRPESQHNPGHQSDFAETIY 88 >gb|ESR36834.1| hypothetical protein CICLE_v10027701mg [Citrus clementina] Length = 1195 Score = 121 bits (304), Expect = 1e-25 Identities = 60/87 (68%), Positives = 68/87 (78%) Frame = -1 Query: 542 MDDEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 363 M+D+++Y++ DAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV Sbjct: 2 MEDDYDYEEQHQQEEEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 61 Query: 362 DESADIEIRPESQHNPGHQPDFAEVLW 282 DESADIEIRPESQHNPG Q DFAE ++ Sbjct: 62 DESADIEIRPESQHNPGQQSDFAETIY 88 >ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum] gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName: Full=DNA-directed RNA polymerase II subunit RPB2; Short=RNA polymerase II subunit 2; Short=RNA polymerase II subunit B2; AltName: Full=DNA-directed RNA polymerase II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA polymerase II subunit 2 [Solanum lycopersicum] Length = 1191 Score = 121 bits (304), Expect = 1e-25 Identities = 63/87 (72%), Positives = 66/87 (75%) Frame = -1 Query: 542 MDDEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 363 MD E EY+ N AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV Sbjct: 1 MDMEDEYEPQYNVDDDEEEITQED--AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 58 Query: 362 DESADIEIRPESQHNPGHQPDFAEVLW 282 DESADIEIRPESQHNPGHQ DFAE ++ Sbjct: 59 DESADIEIRPESQHNPGHQSDFAETIY 85 >ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum tuberosum] Length = 1191 Score = 121 bits (303), Expect = 1e-25 Identities = 63/87 (72%), Positives = 66/87 (75%) Frame = -1 Query: 542 MDDEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 363 MD E EY+ N AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV Sbjct: 1 MDLEDEYEPQYNVDDDEEEITQED--AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 58 Query: 362 DESADIEIRPESQHNPGHQPDFAEVLW 282 DESADIEIRPESQHNPGHQ DFAE ++ Sbjct: 59 DESADIEIRPESQHNPGHQSDFAETIY 85 >dbj|BAD44440.1| DNA-directed RNA polymerase II second largest chain [Arabidopsis thaliana] Length = 124 Score = 120 bits (302), Expect = 2e-25 Identities = 59/63 (93%), Positives = 60/63 (95%) Frame = -1 Query: 464 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFAEVL 285 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DFAEV+ Sbjct: 26 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAEVV 85 Query: 284 WVF 276 F Sbjct: 86 SSF 88 >gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum] Length = 1191 Score = 120 bits (302), Expect = 2e-25 Identities = 61/86 (70%), Positives = 66/86 (76%) Frame = -1 Query: 539 DDEHEYDQPLNXXXXXXXXXXXXXDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 360 ++E EYD + AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD Sbjct: 4 EEEEEYDPTMEDEEEEITQED----AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 59 Query: 359 ESADIEIRPESQHNPGHQPDFAEVLW 282 ESADIEIRPESQHNPGHQ DFAE ++ Sbjct: 60 ESADIEIRPESQHNPGHQSDFAETIY 85 >ref|XP_006285577.1| hypothetical protein CARUB_v10007021mg [Capsella rubella] gi|482554282|gb|EOA18475.1| hypothetical protein CARUB_v10007021mg [Capsella rubella] Length = 1188 Score = 120 bits (300), Expect = 3e-25 Identities = 57/61 (93%), Positives = 59/61 (96%) Frame = -1 Query: 464 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFAEVL 285 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DFAE + Sbjct: 26 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 85 Query: 284 W 282 + Sbjct: 86 Y 86 >ref|XP_002867829.1| hypothetical protein ARALYDRAFT_492703 [Arabidopsis lyrata subsp. lyrata] gi|297313665|gb|EFH44088.1| hypothetical protein ARALYDRAFT_492703 [Arabidopsis lyrata subsp. lyrata] Length = 1188 Score = 120 bits (300), Expect = 3e-25 Identities = 57/61 (93%), Positives = 59/61 (96%) Frame = -1 Query: 464 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFAEVL 285 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DFAE + Sbjct: 26 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 85 Query: 284 W 282 + Sbjct: 86 Y 86 >ref|XP_002305136.1| predicted protein [Populus trichocarpa] Length = 690 Score = 120 bits (300), Expect = 3e-25 Identities = 57/61 (93%), Positives = 59/61 (96%) Frame = -1 Query: 464 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFAEVL 285 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DFAE + Sbjct: 17 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 76 Query: 284 W 282 + Sbjct: 77 Y 77 >gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus] Length = 1200 Score = 120 bits (300), Expect = 3e-25 Identities = 57/61 (93%), Positives = 59/61 (96%) Frame = -1 Query: 464 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFAEVL 285 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QPDFAE + Sbjct: 34 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQPDFAETI 93 Query: 284 W 282 + Sbjct: 94 Y 94