BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00006450
         (543 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   125   8e-27
gb|EEF04299.2| transcription initiation factor IIF alpha subunit...   118   7e-25
ref|XP_002322538.1| predicted protein [Populus trichocarpa]           118   7e-25
gb|ERP58675.1| hypothetical protein POPTR_0006s01070g [Populus t...   114   1e-23
ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   110   2e-22
emb|CBI33123.3| unnamed protein product [Vitis vinifera]              110   2e-22
emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]   110   2e-22
gb|EOY28872.1| Transcription activators,DNA binding,RNA polymera...   103   3e-20
gb|EOY28871.1| Transcription activators,DNA binding,RNA polymera...   103   3e-20
gb|EOY28870.1| Transcription activators,DNA binding,RNA polymera...   103   3e-20
gb|EOY28869.1| Transcription activators,DNA binding,RNA polymera...   103   3e-20
gb|EMT20390.1| Transcription initiation factor IIF subunit alpha...   103   3e-20
ref|XP_003573836.1| PREDICTED: transcription initiation factor I...   102   4e-20
ref|XP_002489182.1| hypothetical protein SORBIDRAFT_0013s009090 ...   102   5e-20
gb|EMS62582.1| Transcription initiation factor IIF subunit alpha...   102   7e-20
ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|...   102   7e-20
ref|XP_006352367.1| PREDICTED: transcription initiation factor I...   101   1e-19
ref|XP_006352364.1| PREDICTED: transcription initiation factor I...   101   1e-19
ref|XP_004250258.1| PREDICTED: transcription initiation factor I...   101   1e-19

>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis]
           gi|223541454|gb|EEF43004.1| tfiif-alpha, putative
           [Ricinus communis]
          Length = 533

 Score =  125 bits (313), Expect = 8e-27
 Identities = 65/74 (87%), Positives = 69/74 (93%)
 Frame = +2

Query: 8   ATSSLKPGSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISKI 187
           A  S K GSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLK SEDKKAFA+ILRRISKI
Sbjct: 460 APPSAKTGSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKI 519

Query: 188 QKTSGSNYVVLRER 229
           QKTSGS+YVVLR++
Sbjct: 520 QKTSGSSYVVLRDK 533


>gb|EEF04299.2| transcription initiation factor IIF alpha subunit family protein
           [Populus trichocarpa]
          Length = 540

 Score =  118 bits (296), Expect = 7e-25
 Identities = 63/75 (84%), Positives = 68/75 (90%)
 Frame = +2

Query: 5   GATSSLKPGSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISK 184
           G+TS    GST PVTEEEIRAVLLQNGPVTTQDLVARFKSRL+  EDKKAFA+ILRRISK
Sbjct: 470 GSTS----GSTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISK 525

Query: 185 IQKTSGSNYVVLRER 229
           IQKTSGSNYVVLR++
Sbjct: 526 IQKTSGSNYVVLRDK 540


>ref|XP_002322538.1| predicted protein [Populus trichocarpa]
          Length = 540

 Score =  118 bits (296), Expect = 7e-25
 Identities = 63/75 (84%), Positives = 68/75 (90%)
 Frame = +2

Query: 5   GATSSLKPGSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISK 184
           G+TS    GST PVTEEEIRAVLLQNGPVTTQDLVARFKSRL+  EDKKAFA+ILRRISK
Sbjct: 470 GSTS----GSTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISK 525

Query: 185 IQKTSGSNYVVLRER 229
           IQKTSGSNYVVLR++
Sbjct: 526 IQKTSGSNYVVLRDK 540


>gb|ERP58675.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score =  114 bits (286), Expect = 1e-23
 Identities = 58/67 (86%), Positives = 63/67 (94%)
 Frame = +2

Query: 29  GSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISKIQKTSGSN 208
           G T PVTEEEIRAVLLQNGPVTTQDLVARFKSRL+  EDKKAFA+ILRRISKIQKTSGSN
Sbjct: 469 GPTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSN 528

Query: 209 YVVLRER 229
           +VVLR++
Sbjct: 529 FVVLRDK 535


>ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
           transcription initiation factor IIF alpha subunit family
           protein [Populus trichocarpa]
          Length = 541

 Score =  114 bits (286), Expect = 1e-23
 Identities = 58/67 (86%), Positives = 63/67 (94%)
 Frame = +2

Query: 29  GSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISKIQKTSGSN 208
           G T PVTEEEIRAVLLQNGPVTTQDLVARFKSRL+  EDKKAFA+ILRRISKIQKTSGSN
Sbjct: 474 GPTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSN 533

Query: 209 YVVLRER 229
           +VVLR++
Sbjct: 534 FVVLRDK 540


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Vitis vinifera]
          Length = 534

 Score =  110 bits (276), Expect = 2e-22
 Identities = 58/76 (76%), Positives = 67/76 (88%), Gaps = 3/76 (3%)
 Frame = +2

Query: 11  TSSLKPGSTS---PVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRIS 181
           +SS+K GSTS   PVTE+EIRAVLLQ  PVTTQDLVA+FK+RLK  EDKKAFA+ILRRIS
Sbjct: 459 SSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRIS 518

Query: 182 KIQKTSGSNYVVLRER 229
           KIQKT+G NYVVLR++
Sbjct: 519 KIQKTNGPNYVVLRDK 534


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  110 bits (276), Expect = 2e-22
 Identities = 58/76 (76%), Positives = 67/76 (88%), Gaps = 3/76 (3%)
 Frame = +2

Query: 11  TSSLKPGSTS---PVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRIS 181
           +SS+K GSTS   PVTE+EIRAVLLQ  PVTTQDLVA+FK+RLK  EDKKAFA+ILRRIS
Sbjct: 464 SSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRIS 523

Query: 182 KIQKTSGSNYVVLRER 229
           KIQKT+G NYVVLR++
Sbjct: 524 KIQKTNGPNYVVLRDK 539


>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
          Length = 435

 Score =  110 bits (276), Expect = 2e-22
 Identities = 58/76 (76%), Positives = 67/76 (88%), Gaps = 3/76 (3%)
 Frame = +2

Query: 11  TSSLKPGSTS---PVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRIS 181
           +SS+K GSTS   PVTE+EIRAVLLQ  PVTTQDLVA+FK+RLK  EDKKAFA+ILRRIS
Sbjct: 360 SSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRIS 419

Query: 182 KIQKTSGSNYVVLRER 229
           KIQKT+G NYVVLR++
Sbjct: 420 KIQKTNGPNYVVLRDK 435


>gb|EOY28872.1| Transcription activators,DNA binding,RNA polymerase II
           transcription factors,catalytics,transcription
           initiation factors isoform 4 [Theobroma cacao]
          Length = 480

 Score =  103 bits (256), Expect = 3e-20
 Identities = 57/77 (74%), Positives = 65/77 (84%), Gaps = 4/77 (5%)
 Frame = +2

Query: 11  TSSLKPGSTS---PVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRIS 181
           +SS K GS S   PVTEEEIRAVLLQ  PVTT DLVA+FK+RLK  EDKKAFA+ILRRIS
Sbjct: 404 SSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRIS 463

Query: 182 KIQKTSG-SNYVVLRER 229
           KIQKT+G +NYVVLR++
Sbjct: 464 KIQKTNGPNNYVVLRDK 480


>gb|EOY28871.1| Transcription activators,DNA binding,RNA polymerase II
           transcription factors,catalytics,transcription
           initiation factors isoform 3 [Theobroma cacao]
          Length = 496

 Score =  103 bits (256), Expect = 3e-20
 Identities = 57/77 (74%), Positives = 65/77 (84%), Gaps = 4/77 (5%)
 Frame = +2

Query: 11  TSSLKPGSTS---PVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRIS 181
           +SS K GS S   PVTEEEIRAVLLQ  PVTT DLVA+FK+RLK  EDKKAFA+ILRRIS
Sbjct: 420 SSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRIS 479

Query: 182 KIQKTSG-SNYVVLRER 229
           KIQKT+G +NYVVLR++
Sbjct: 480 KIQKTNGPNNYVVLRDK 496


>gb|EOY28870.1| Transcription activators,DNA binding,RNA polymerase II
           transcription factors,catalytics,transcription
           initiation factors isoform 2 [Theobroma cacao]
          Length = 473

 Score =  103 bits (256), Expect = 3e-20
 Identities = 57/77 (74%), Positives = 65/77 (84%), Gaps = 4/77 (5%)
 Frame = +2

Query: 11  TSSLKPGSTS---PVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRIS 181
           +SS K GS S   PVTEEEIRAVLLQ  PVTT DLVA+FK+RLK  EDKKAFA+ILRRIS
Sbjct: 397 SSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRIS 456

Query: 182 KIQKTSG-SNYVVLRER 229
           KIQKT+G +NYVVLR++
Sbjct: 457 KIQKTNGPNNYVVLRDK 473


>gb|EOY28869.1| Transcription activators,DNA binding,RNA polymerase II
           transcription factors,catalytics,transcription
           initiation factors isoform 1 [Theobroma cacao]
          Length = 549

 Score =  103 bits (256), Expect = 3e-20
 Identities = 57/77 (74%), Positives = 65/77 (84%), Gaps = 4/77 (5%)
 Frame = +2

Query: 11  TSSLKPGSTS---PVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRIS 181
           +SS K GS S   PVTEEEIRAVLLQ  PVTT DLVA+FK+RLK  EDKKAFA+ILRRIS
Sbjct: 473 SSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRIS 532

Query: 182 KIQKTSG-SNYVVLRER 229
           KIQKT+G +NYVVLR++
Sbjct: 533 KIQKTNGPNNYVVLRDK 549


>gb|EMT20390.1| Transcription initiation factor IIF subunit alpha [Aegilops
           tauschii]
          Length = 668

 Score =  103 bits (256), Expect = 3e-20
 Identities = 52/73 (71%), Positives = 62/73 (84%)
 Frame = +2

Query: 8   ATSSLKPGSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISKI 187
           A++S +  + SPVTE+EIR VLL   PVTTQDLV+RFKSRL+G EDK AFAEIL++ISKI
Sbjct: 593 ASASSRSANVSPVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKI 652

Query: 188 QKTSGSNYVVLRE 226
           QKT+G NYVVLRE
Sbjct: 653 QKTNGHNYVVLRE 665


>ref|XP_003573836.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Brachypodium distachyon]
          Length = 530

 Score =  102 bits (255), Expect = 4e-20
 Identities = 52/73 (71%), Positives = 62/73 (84%)
 Frame = +2

Query: 8   ATSSLKPGSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISKI 187
           A++S +  + SPVTE+EIR VLL   PVTTQDLV+RFKSRL+G EDK AFAEIL++ISKI
Sbjct: 455 ASASSRNANVSPVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKI 514

Query: 188 QKTSGSNYVVLRE 226
           QKT+G NYVVLRE
Sbjct: 515 QKTNGHNYVVLRE 527


>ref|XP_002489182.1| hypothetical protein SORBIDRAFT_0013s009090 [Sorghum bicolor]
           gi|241947132|gb|EES20277.1| hypothetical protein
           SORBIDRAFT_0013s009090 [Sorghum bicolor]
          Length = 328

 Score =  102 bits (254), Expect = 5e-20
 Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 11/84 (13%)
 Frame = +2

Query: 8   ATSSLKPGST-----------SPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKA 154
           A+SS KP S            SPVTE+EIR+VLL   PVTTQDLV+RFKSRL+GSEDK A
Sbjct: 242 ASSSAKPASKISASSKSGTNISPVTEDEIRSVLLAVAPVTTQDLVSRFKSRLRGSEDKNA 301

Query: 155 FAEILRRISKIQKTSGSNYVVLRE 226
           FAEIL++ISKIQKT+G NYVVLR+
Sbjct: 302 FAEILKKISKIQKTNGHNYVVLRD 325


>gb|EMS62582.1| Transcription initiation factor IIF subunit alpha [Triticum urartu]
          Length = 369

 Score =  102 bits (253), Expect = 7e-20
 Identities = 52/73 (71%), Positives = 62/73 (84%)
 Frame = +2

Query: 8   ATSSLKPGSTSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISKI 187
           A++S +  + SPVTE+EIR VLL   PVTTQDLV+RFKSRL+G EDK AFAEIL++ISKI
Sbjct: 294 ASASSRSVNVSPVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKI 353

Query: 188 QKTSGSNYVVLRE 226
           QKT+G NYVVLRE
Sbjct: 354 QKTNGHNYVVLRE 366


>ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis]
           gi|223530933|gb|EEF32792.1| tfiif-alpha, putative
           [Ricinus communis]
          Length = 584

 Score =  102 bits (253), Expect = 7e-20
 Identities = 54/78 (69%), Positives = 65/78 (83%), Gaps = 3/78 (3%)
 Frame = +2

Query: 5   GATSSLKPGSTSP---VTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRR 175
           GA +SL+  STS    VT+EEI+AVLLQNGPVTTQDLVA+FKSRLK  EDK+AF   L+R
Sbjct: 507 GAAASLRTESTSSTGFVTDEEIKAVLLQNGPVTTQDLVAKFKSRLKTREDKEAFTHTLKR 566

Query: 176 ISKIQKTSGSNYVVLRER 229
           IS+IQKTSG +YVVLR++
Sbjct: 567 ISRIQKTSGGSYVVLRDK 584


>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           isoform X4 [Solanum tuberosum]
          Length = 535

 Score =  101 bits (251), Expect = 1e-19
 Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 4/79 (5%)
 Frame = +2

Query: 5   GATSSLKPG---STSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRR 175
           GA+SS K     +T PVTE+EIRAVLLQ  PVTTQDLV++FKSRLK  EDK AFAE+LR+
Sbjct: 457 GASSSSKTAPSPATGPVTEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRK 516

Query: 176 ISKIQK-TSGSNYVVLRER 229
           ISKIQK T+GS+YVVLRER
Sbjct: 517 ISKIQKTTTGSSYVVLRER 535


>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           isoform X1 [Solanum tuberosum]
           gi|565371548|ref|XP_006352365.1| PREDICTED:
           transcription initiation factor IIF subunit alpha-like
           isoform X2 [Solanum tuberosum]
           gi|565371550|ref|XP_006352366.1| PREDICTED:
           transcription initiation factor IIF subunit alpha-like
           isoform X3 [Solanum tuberosum]
          Length = 538

 Score =  101 bits (251), Expect = 1e-19
 Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 4/79 (5%)
 Frame = +2

Query: 5   GATSSLKPG---STSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRR 175
           GA+SS K     +T PVTE+EIRAVLLQ  PVTTQDLV++FKSRLK  EDK AFAE+LR+
Sbjct: 457 GASSSSKTAPSPATGPVTEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRK 516

Query: 176 ISKIQK-TSGSNYVVLRER 229
           ISKIQK T+GS+YVVLRER
Sbjct: 517 ISKIQKTTTGSSYVVLRER 535


>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Solanum lycopersicum]
          Length = 534

 Score =  101 bits (251), Expect = 1e-19
 Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 4/79 (5%)
 Frame = +2

Query: 5   GATSSLKPG---STSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRR 175
           GA+SS K     +T PVTE+EIRAVLLQ  PVTTQDLV++FKSRLK  EDK AFAE+LR+
Sbjct: 456 GASSSSKTAPSSATGPVTEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRK 515

Query: 176 ISKIQK-TSGSNYVVLRER 229
           ISKIQK T+GS+YVVLRER
Sbjct: 516 ISKIQKTTTGSSYVVLRER 534