BLASTX nr result

ID: Jatropha_contig00006242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00006242
         (608 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus...    67   4e-09
gb|AFK48998.1| unknown [Lotus japonicus]                               67   4e-09
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin...    67   4e-09
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...    67   4e-09
ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|2...    67   4e-09
ref|XP_004510524.1| PREDICTED: U6 snRNA-associated Sm-like prote...    67   5e-09
ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like prote...    67   5e-09
gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus pe...    67   5e-09
gb|ESQ48583.1| hypothetical protein EUTSA_v10021763mg [Eutrema s...    66   8e-09
ref|XP_006298813.1| hypothetical protein CARUB_v10014920mg [Caps...    66   8e-09
ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like prote...    66   8e-09
ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arab...    66   8e-09
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|1...    66   8e-09
gb|ESR39941.1| hypothetical protein CICLE_v10026767mg [Citrus cl...    65   1e-08
gb|ERM99455.1| hypothetical protein AMTR_s00131p00107350 [Ambore...    65   1e-08
gb|ABK22805.1| unknown [Picea sitchensis]                              65   1e-08
ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like prote...    65   2e-08
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...    65   2e-08
gb|EPS67133.1| hypothetical protein M569_07641 [Genlisea aurea]        64   2e-08
ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabi...    64   2e-08

>gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
          Length = 128

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 32


>gb|AFK48998.1| unknown [Lotus japonicus]
          Length = 80

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 32


>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
           gi|255628281|gb|ACU14485.1| unknown [Glycine max]
           gi|561008464|gb|ESW07413.1| hypothetical protein
           PHAVU_010G127800g [Phaseolus vulgaris]
          Length = 128

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 32


>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 32


>ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|222841552|gb|EEE79099.1|
           small nuclear ribonucleoprotein [Populus trichocarpa]
          Length = 128

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 32


>ref|XP_004510524.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X2
           [Cicer arietinum]
          Length = 122

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDIYLSTSLASYLDKKLL+LLRDGRK
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLILLRDGRK 32


>ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X1
           [Cicer arietinum]
          Length = 128

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDIYLSTSLASYLDKKLL+LLRDGRK
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLILLRDGRK 32


>gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus persica]
          Length = 128

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPED+YLSTSLASYLDKKLLVLLRDGRK
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRK 32


>gb|ESQ48583.1| hypothetical protein EUTSA_v10021763mg [Eutrema salsugineum]
          Length = 128

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDIYLSTSLASYLD+KLLVLLRDGRK
Sbjct: 1   MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRK 32


>ref|XP_006298813.1| hypothetical protein CARUB_v10014920mg [Capsella rubella]
           gi|482567522|gb|EOA31711.1| hypothetical protein
           CARUB_v10014920mg [Capsella rubella]
          Length = 107

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDIYLSTSLASYLD+KLLVLLRDGRK
Sbjct: 1   MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRK 32


>ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
           vesca subsp. vesca]
          Length = 128

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPED+YLSTSLASYLDKK+LVLLRDGRK
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKILVLLRDGRK 32


>ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
           lyrata] gi|565482348|ref|XP_006298814.1| hypothetical
           protein CARUB_v10014920mg [Capsella rubella]
           gi|297328707|gb|EFH59126.1| hypothetical protein
           ARALYDRAFT_478821 [Arabidopsis lyrata subsp. lyrata]
           gi|482567523|gb|EOA31712.1| hypothetical protein
           CARUB_v10014920mg [Capsella rubella]
          Length = 128

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDIYLSTSLASYLD+KLLVLLRDGRK
Sbjct: 1   MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRK 32


>ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|118489961|gb|ABK96777.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|550347483|gb|ERP65692.1| small nuclear
           ribonucleoprotein [Populus trichocarpa]
          Length = 128

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDIYLSTSLA+YLDKKLLVLLRDGRK
Sbjct: 1   MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRK 32


>gb|ESR39941.1| hypothetical protein CICLE_v10026767mg [Citrus clementina]
          Length = 128

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGP+D+YLSTSLASYLDKKLLVLLRDGRK
Sbjct: 1   MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRK 32


>gb|ERM99455.1| hypothetical protein AMTR_s00131p00107350 [Amborella trichopoda]
          Length = 128

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDI+LSTSLASYLDKKLLVLLRDGRK
Sbjct: 1   MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRK 32


>gb|ABK22805.1| unknown [Picea sitchensis]
          Length = 172

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDI+LSTSLASYLDKKLLVLLRDGRK
Sbjct: 45  MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRK 76


>ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
           lycopersicum]
          Length = 128

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWA PEDIYLSTSLASYLDKKLLVLLRDGRK
Sbjct: 1   MSWASPEDIYLSTSLASYLDKKLLVLLRDGRK 32


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPEDIYLSTSLASYLDKKLLVLLRD RK
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRK 32


>gb|EPS67133.1| hypothetical protein M569_07641 [Genlisea aurea]
          Length = 128

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWA PED+YLSTSLASYLDKKLLVLLRDGRK
Sbjct: 1   MSWANPEDVYLSTSLASYLDKKLLVLLRDGRK 32


>ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
           gi|30682974|ref|NP_850580.1| U6 snRNA-associated Sm-like
           protein LSm1 [Arabidopsis thaliana]
           gi|21536995|gb|AAM61336.1| Sm protein, putative
           [Arabidopsis thaliana] gi|27754337|gb|AAO22620.1|
           putative Sm protein [Arabidopsis thaliana]
           gi|28393853|gb|AAO42334.1| putative Sm protein
           [Arabidopsis thaliana] gi|332641944|gb|AEE75465.1| U6
           snRNA-associated Sm-like protein LSm1 [Arabidopsis
           thaliana] gi|332641945|gb|AEE75466.1| U6
           snRNA-associated Sm-like protein LSm1 [Arabidopsis
           thaliana]
          Length = 128

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = +1

Query: 511 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRK 606
           MSWAGPE+IYLSTSLASYLD+KLLVLLRDGRK
Sbjct: 1   MSWAGPEEIYLSTSLASYLDRKLLVLLRDGRK 32


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