BLASTX nr result

ID: Jatropha_contig00006162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00006162
         (267 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERP61464.1| hypothetical protein POPTR_0005s23390g [Populus t...    57   3e-06
ref|XP_002524752.1| nucleolar protein nop56, putative [Ricinus c...    55   9e-06

>gb|ERP61464.1| hypothetical protein POPTR_0005s23390g [Populus trichocarpa]
           gi|550339592|gb|EEE93780.2| hypothetical protein
           POPTR_0005s23390g [Populus trichocarpa]
          Length = 544

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/43 (60%), Positives = 33/43 (76%)
 Frame = +3

Query: 6   EKQAKELAFGVSEREVDQAFGRQNEEWFFPVPRRGSFEGHAVA 134
           +++AKELA+GV  +EVDQ FG+Q EE+FFP PRR   EG A A
Sbjct: 502 DREAKELAYGVPAKEVDQIFGKQQEEFFFPGPRRQRREGRAYA 544


>ref|XP_002524752.1| nucleolar protein nop56, putative [Ricinus communis]
           gi|223535936|gb|EEF37595.1| nucleolar protein nop56,
           putative [Ricinus communis]
          Length = 560

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +3

Query: 6   EKQAKELAFGVSEREVDQAFGRQNEEWFFPVPRRGSFEGHAVA 134
           E++AKELAFGV  REVD+ F  QNE +FFP PRR  ++G A A
Sbjct: 518 EREAKELAFGVRAREVDEVFESQNEVFFFPGPRRQEWQGRASA 560


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