BLASTX nr result
ID: Jatropha_contig00006015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00006015
(529 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE92379.2| zinc finger family protein [Populus trichocarpa] 80 3e-13
gb|ERP58758.1| hypothetical protein POPTR_0006s03070g [Populus t... 80 3e-13
ref|XP_002308856.1| predicted protein [Populus trichocarpa] 80 3e-13
gb|ABK95425.1| unknown [Populus trichocarpa] 80 3e-13
gb|EOY08709.1| RING-H2 finger C1A, putative [Theobroma cacao] 78 1e-12
ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|2... 69 6e-10
gb|ESR43695.1| hypothetical protein CICLE_v10012279mg [Citrus cl... 65 7e-09
gb|EMJ16889.1| hypothetical protein PRUPE_ppa008742mg [Prunus pe... 65 7e-09
ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 62 8e-08
ref|XP_002283612.2| PREDICTED: E3 ubiquitin-protein ligase RING1... 62 8e-08
gb|ESW17493.1| hypothetical protein PHAVU_007G243900g [Phaseolus... 58 1e-06
ref|XP_003545449.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 57 3e-06
ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 55 7e-06
>gb|EEE92379.2| zinc finger family protein [Populus trichocarpa]
Length = 308
Score = 79.7 bits (195), Expect = 3e-13
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -1
Query: 271 PFSYLWPFRSASSSSNHDGTAGGSSSTVHENNHQMGYRGWPF 146
P SYLWPFRS++SSSNHD T G SS T+HENNHQMGY GWPF
Sbjct: 266 PLSYLWPFRSSNSSSNHDETPGSSSPTMHENNHQMGYSGWPF 307
>gb|ERP58758.1| hypothetical protein POPTR_0006s03070g [Populus trichocarpa]
Length = 264
Score = 79.7 bits (195), Expect = 3e-13
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -1
Query: 271 PFSYLWPFRSASSSSNHDGTAGGSSSTVHENNHQMGYRGWPF 146
P SYLWPFRS++SSSNHD T G SS T+HENNHQMGY GWPF
Sbjct: 222 PLSYLWPFRSSNSSSNHDETPGSSSPTMHENNHQMGYSGWPF 263
>ref|XP_002308856.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 79.7 bits (195), Expect = 3e-13
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -1
Query: 271 PFSYLWPFRSASSSSNHDGTAGGSSSTVHENNHQMGYRGWPF 146
P SYLWPFRS++SSSNHD T G SS T+HENNHQMGY GWPF
Sbjct: 269 PLSYLWPFRSSNSSSNHDETPGSSSPTMHENNHQMGYSGWPF 310
>gb|ABK95425.1| unknown [Populus trichocarpa]
Length = 264
Score = 79.7 bits (195), Expect = 3e-13
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -1
Query: 271 PFSYLWPFRSASSSSNHDGTAGGSSSTVHENNHQMGYRGWPF 146
P SYLWPFRS++SSSNHD T G SS T+HENNHQMGY GWPF
Sbjct: 222 PLSYLWPFRSSNSSSNHDETPGSSSPTMHENNHQMGYSGWPF 263
>gb|EOY08709.1| RING-H2 finger C1A, putative [Theobroma cacao]
Length = 312
Score = 78.2 bits (191), Expect = 1e-12
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -1
Query: 271 PFSYLWPFRSASSSSNHDGTAGGSSSTVHENNHQMGYRGWPFE 143
PFSY WPFRS++SSS+H+G AG SS +VHENNH MGY GWPF+
Sbjct: 270 PFSYFWPFRSSNSSSSHNGAAGSSSPSVHENNHSMGYSGWPFD 312
>ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|222867840|gb|EEF04971.1|
zinc finger family protein [Populus trichocarpa]
Length = 308
Score = 68.9 bits (167), Expect = 6e-10
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = -1
Query: 271 PFSYLWPFRSASSSSNHDGTAGGSSSTVHENNHQMGYRGWPF 146
P SYLWPFRS++SSSNHD T SS +HENN MGY GWPF
Sbjct: 266 PLSYLWPFRSSNSSSNHDETPESSSPAMHENNPHMGYSGWPF 307
>gb|ESR43695.1| hypothetical protein CICLE_v10012279mg [Citrus clementina]
gi|557532513|gb|ESR43696.1| hypothetical protein
CICLE_v10012279mg [Citrus clementina]
gi|557532514|gb|ESR43697.1| hypothetical protein
CICLE_v10012279mg [Citrus clementina]
Length = 309
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = -1
Query: 268 FSYLWPFRSASSSSNHDGTAGGSSSTVHENNHQMGYRGWPFE 143
FS WPFRS++SSSNH+GT SS +HENN MGY GWPF+
Sbjct: 268 FSGFWPFRSSNSSSNHNGTTESSSPAMHENNPHMGYSGWPFD 309
>gb|EMJ16889.1| hypothetical protein PRUPE_ppa008742mg [Prunus persica]
Length = 321
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 12/55 (21%)
Frame = -1
Query: 271 PFSYLWPFRSASSSS------------NHDGTAGGSSSTVHENNHQMGYRGWPFE 143
PFSYLWPFRS+ +SS NH+ TA SSST+ ENN+QMGY GWPF+
Sbjct: 266 PFSYLWPFRSSGASSSSSHTHTHTHTSNHNPTAESSSSTMRENNNQMGYSGWPFD 320
>ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449529445|ref|XP_004171710.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 305
Score = 62.0 bits (149), Expect = 8e-08
Identities = 25/44 (56%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Frame = -1
Query: 271 PFSYLWPFRSASSSSNHDGTAGGSSSTVHE-NNHQMGYRGWPFE 143
PF+ LWPFR++SS+SNH T G +S +HE N H+ GY GWPF+
Sbjct: 262 PFTSLWPFRASSSNSNHSATTGSNSPALHETNQHETGYYGWPFD 305
>ref|XP_002283612.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Vitis
vinifera]
Length = 269
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/43 (62%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = -1
Query: 268 FSYLWPFRSASSSSNHDGTAGGSSSTVHENNHQM-GYRGWPFE 143
+S LWPFRS++SSS+H+ T G SS+TVHE+ HQ GY GWPF+
Sbjct: 227 WSLLWPFRSSNSSSHHNETGGSSSATVHEDIHQQTGYHGWPFD 269
>gb|ESW17493.1| hypothetical protein PHAVU_007G243900g [Phaseolus vulgaris]
gi|561018690|gb|ESW17494.1| hypothetical protein
PHAVU_007G243900g [Phaseolus vulgaris]
gi|561018691|gb|ESW17495.1| hypothetical protein
PHAVU_007G243900g [Phaseolus vulgaris]
gi|561018692|gb|ESW17496.1| hypothetical protein
PHAVU_007G243900g [Phaseolus vulgaris]
Length = 308
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/44 (54%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -1
Query: 271 PFSYLWPFRSASSSSNHDGTAGGS-SSTVHENNHQMGYRGWPFE 143
PFS+LWPFRS+ SSSN + T + + ++ EN+H GY GWPFE
Sbjct: 265 PFSFLWPFRSSHSSSNDEATGSSTPAPSIPENSHHAGYSGWPFE 308
>ref|XP_003545449.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Glycine max] gi|356554227|ref|XP_003545450.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 2 [Glycine max] gi|356554229|ref|XP_003545451.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 3 [Glycine max] gi|356554231|ref|XP_003545452.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 4 [Glycine max]
Length = 336
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/44 (54%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -1
Query: 271 PFSYLWPFRSASSSSNH-DGTAGGSSSTVHENNHQMGYRGWPFE 143
PFS+LWPFRS++S++NH T G SSST + N+ Y GWPF+
Sbjct: 292 PFSFLWPFRSSNSNNNHYSETGGSSSSTTPDQNNGTSYSGWPFD 335
>ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 309
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Frame = -1
Query: 271 PFSYLWPFRSASSSSNHDGTAGGS-SSTVHEN--NHQMGYRGWPFE 143
PFS+LWPFRS+ SSSN + T S + T+ EN +H GY GWPFE
Sbjct: 264 PFSFLWPFRSSHSSSNDEATGSSSPTPTIPENSHHHHAGYSGWPFE 309