BLASTX nr result
ID: Jatropha_contig00005872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00005872
(404 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513314.1| pumilio, putative [Ricinus communis] gi|2235... 90 3e-16
gb|EOY26282.1| Pumilio, putative isoform 1 [Theobroma cacao] 86 6e-15
ref|XP_006342853.1| PREDICTED: pumilio homolog 5-like [Solanum t... 84 2e-14
gb|ESQ47860.1| hypothetical protein EUTSA_v10020002mg [Eutrema s... 84 2e-14
ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera... 84 2e-14
ref|XP_002311896.1| predicted protein [Populus trichocarpa] 83 4e-14
ref|XP_006296918.1| hypothetical protein CARUB_v10012910mg [Caps... 82 5e-14
ref|NP_188660.3| pumilio 5 [Arabidopsis thaliana] gi|313471415|s... 82 5e-14
dbj|BAB01884.1| RNA binding protein-like [Arabidopsis thaliana] 82 5e-14
ref|XP_002885359.1| hypothetical protein ARALYDRAFT_342166 [Arab... 82 5e-14
gb|ESW33964.1| hypothetical protein PHAVU_001G113100g, partial [... 80 2e-13
gb|EMJ18811.1| hypothetical protein PRUPE_ppa016404mg, partial [... 80 2e-13
ref|XP_004297891.1| PREDICTED: pumilio homolog 6, chloroplastic-... 79 5e-13
gb|ERP48471.1| hypothetical protein POPTR_0022s00840g [Populus t... 79 8e-13
gb|EOY31964.1| Pumilio 5, putative isoform 1 [Theobroma cacao] g... 79 8e-13
ref|XP_004235501.1| PREDICTED: pumilio homolog 5-like [Solanum l... 79 8e-13
gb|ERP59571.1| hypothetical protein POPTR_0006s17870g [Populus t... 78 1e-12
ref|XP_004303805.1| PREDICTED: pumilio homolog 5-like [Fragaria ... 78 1e-12
ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homo... 78 1e-12
gb|ACU20255.1| unknown [Glycine max] 78 1e-12
>ref|XP_002513314.1| pumilio, putative [Ricinus communis] gi|223547222|gb|EEF48717.1|
pumilio, putative [Ricinus communis]
Length = 1004
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGE 259
YVVQKILEISND+QR +LL+ IRIHLHALKKYTYGKHIVARFEQLCGE
Sbjct: 950 YVVQKILEISNDKQREILLSRIRIHLHALKKYTYGKHIVARFEQLCGE 997
>gb|EOY26282.1| Pumilio, putative isoform 1 [Theobroma cacao]
Length = 1005
Score = 85.5 bits (210), Expect = 6e-15
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEAS 244
YVVQKIL+ISNDRQR +LL +R+HL+ALKKYTYGKHI ARFEQL GEES+ S
Sbjct: 951 YVVQKILDISNDRQREVLLGRVRVHLNALKKYTYGKHIAARFEQLFGEESDES 1003
>ref|XP_006342853.1| PREDICTED: pumilio homolog 5-like [Solanum tuberosum]
Length = 1001
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/49 (79%), Positives = 45/49 (91%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEE 256
YVVQKILEISN++ R +LL+ IR+HLHALKKYTYGKHIVARFEQLC E+
Sbjct: 947 YVVQKILEISNNKHREILLSRIRVHLHALKKYTYGKHIVARFEQLCDED 995
>gb|ESQ47860.1| hypothetical protein EUTSA_v10020002mg [Eutrema salsugineum]
Length = 950
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/54 (74%), Positives = 48/54 (88%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEASE 241
YVVQK+LEIS D+QR +L+ ++IHL +L+KYTYGKHIVARFEQL GEESEASE
Sbjct: 892 YVVQKVLEISKDQQREILVQRMKIHLQSLRKYTYGKHIVARFEQLFGEESEASE 945
>ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|297735758|emb|CBI18445.3| unnamed protein product
[Vitis vinifera]
Length = 1053
Score = 83.6 bits (205), Expect = 2e-14
Identities = 40/48 (83%), Positives = 44/48 (91%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGE 259
YVVQKILE SND+QR +LLN IR+HL+ALKKYTYGKHIVARFEQLC E
Sbjct: 972 YVVQKILETSNDKQREILLNRIRVHLNALKKYTYGKHIVARFEQLCCE 1019
>ref|XP_002311896.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEASET 238
YVVQKILE SND+Q+ +LL+ I HL+ALKKYTYGKHIVARFEQLC EE + ET
Sbjct: 285 YVVQKILETSNDKQKEILLSRINAHLNALKKYTYGKHIVARFEQLCVEEGQVLET 339
>ref|XP_006296918.1| hypothetical protein CARUB_v10012910mg [Capsella rubella]
gi|565478558|ref|XP_006296919.1| hypothetical protein
CARUB_v10012910mg [Capsella rubella]
gi|482565627|gb|EOA29816.1| hypothetical protein
CARUB_v10012910mg [Capsella rubella]
gi|482565628|gb|EOA29817.1| hypothetical protein
CARUB_v10012910mg [Capsella rubella]
Length = 950
Score = 82.4 bits (202), Expect = 5e-14
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEASE 241
YVVQK+LEIS D+QR +L+ ++IHL +L+KYTYGKHIVARFEQL GEESE SE
Sbjct: 892 YVVQKVLEISKDQQREILVQRMKIHLQSLRKYTYGKHIVARFEQLFGEESEVSE 945
>ref|NP_188660.3| pumilio 5 [Arabidopsis thaliana] gi|313471415|sp|Q9LJX4.2|PUM5_ARATH
RecName: Full=Pumilio homolog 5; Short=APUM-5;
Short=AtPUM5 gi|332642831|gb|AEE76352.1| pumilio 5
[Arabidopsis thaliana]
Length = 961
Score = 82.4 bits (202), Expect = 5e-14
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEASE 241
YVVQK+LEIS D+QR +L+ ++IHL +L+KYTYGKHIVARFEQL GEESE SE
Sbjct: 903 YVVQKVLEISKDQQREILVQRMKIHLQSLRKYTYGKHIVARFEQLFGEESEVSE 956
>dbj|BAB01884.1| RNA binding protein-like [Arabidopsis thaliana]
Length = 962
Score = 82.4 bits (202), Expect = 5e-14
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEASE 241
YVVQK+LEIS D+QR +L+ ++IHL +L+KYTYGKHIVARFEQL GEESE SE
Sbjct: 904 YVVQKVLEISKDQQREILVQRMKIHLQSLRKYTYGKHIVARFEQLFGEESEVSE 957
>ref|XP_002885359.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata] gi|297331199|gb|EFH61618.1| hypothetical protein
ARALYDRAFT_342166 [Arabidopsis lyrata subsp. lyrata]
Length = 965
Score = 82.4 bits (202), Expect = 5e-14
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEASE 241
YVVQK+LEIS D+QR +L+ ++IHL +L+KYTYGKHIVARFEQL GEESE SE
Sbjct: 907 YVVQKVLEISKDQQREILVQRMKIHLQSLRKYTYGKHIVARFEQLFGEESEVSE 960
>gb|ESW33964.1| hypothetical protein PHAVU_001G113100g, partial [Phaseolus
vulgaris]
Length = 260
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/51 (70%), Positives = 45/51 (88%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESE 250
YV+Q++LEI ++ QR +LL+ IR+H HALKKYTYGKHIVARFEQL GEES+
Sbjct: 206 YVIQRVLEICSENQRAMLLSRIRLHAHALKKYTYGKHIVARFEQLLGEESQ 256
>gb|EMJ18811.1| hypothetical protein PRUPE_ppa016404mg, partial [Prunus persica]
Length = 1011
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGE 259
YVVQK+LE SNDRQR LLN IR+H+ ALKKYTYGKHIV RFEQL GE
Sbjct: 964 YVVQKVLETSNDRQRETLLNLIRVHIDALKKYTYGKHIVVRFEQLSGE 1011
>ref|XP_004297891.1| PREDICTED: pumilio homolog 6, chloroplastic-like [Fragaria vesca
subsp. vesca]
Length = 955
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/52 (73%), Positives = 43/52 (82%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEA 247
YVVQK LEI D QR +L+N IR H HALKKYTYGKHIVARFEQL GEE+++
Sbjct: 902 YVVQKTLEICTDSQRTILINRIRAHTHALKKYTYGKHIVARFEQLFGEENQS 953
>gb|ERP48471.1| hypothetical protein POPTR_0022s00840g [Populus trichocarpa]
Length = 962
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEAS 244
YVVQKIL+ D QR +LLN IR H+HALKKYTYGKHIVARFEQ GEE++ S
Sbjct: 910 YVVQKILDTCTDIQRAMLLNRIRTHVHALKKYTYGKHIVARFEQQYGEENQTS 962
>gb|EOY31964.1| Pumilio 5, putative isoform 1 [Theobroma cacao]
gi|508784709|gb|EOY31965.1| Pumilio 5, putative isoform 1
[Theobroma cacao]
Length = 1013
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/53 (69%), Positives = 43/53 (81%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEAS 244
YVVQKI E D QR +LL+ IR+H HALKKYTYGKHIVARFEQL GEE++ +
Sbjct: 959 YVVQKIFETCTDNQRAVLLSRIRLHAHALKKYTYGKHIVARFEQLFGEENQTT 1011
>ref|XP_004235501.1| PREDICTED: pumilio homolog 5-like [Solanum lycopersicum]
Length = 995
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/53 (73%), Positives = 45/53 (84%), Gaps = 4/53 (7%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARF----EQLCGEE 256
YVVQKILEISN++ R +LL+ IR+HLHALKKYTYGKHIVARF EQLC E+
Sbjct: 937 YVVQKILEISNNKHREILLSRIRVHLHALKKYTYGKHIVARFEQLSEQLCNED 989
>gb|ERP59571.1| hypothetical protein POPTR_0006s17870g [Populus trichocarpa]
Length = 214
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEAS 244
YVVQKIL+ D QR +LLN IR H+HALKKYTYGKHIVARFEQ GEE + S
Sbjct: 162 YVVQKILDTCTDIQRAMLLNRIRTHVHALKKYTYGKHIVARFEQQFGEEGQTS 214
>ref|XP_004303805.1| PREDICTED: pumilio homolog 5-like [Fragaria vesca subsp. vesca]
Length = 953
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEAS 244
YV+QK+LE SN++QR +LL+ IR+HL ALKKYTYGKHIV RFEQL E+S+ S
Sbjct: 896 YVIQKVLETSNEKQRKILLSLIRVHLDALKKYTYGKHIVVRFEQLSVEDSQKS 948
>ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 6, chloroplastic-like
[Glycine max]
Length = 952
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEAS 244
YV+QK+ EI ++ QR LL+ IR+H HALKKYTYGKHIVARFEQL GEE++ +
Sbjct: 898 YVIQKVFEICSENQRATLLSRIRLHAHALKKYTYGKHIVARFEQLLGEENQTN 950
>gb|ACU20255.1| unknown [Glycine max]
Length = 246
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = -3
Query: 402 YVVQKILEISNDRQRGLLLNCIRIHLHALKKYTYGKHIVARFEQLCGEESEAS 244
YV+QK+ EI ++ QR LL+ IR+H HALKKYTYGKHIVARFEQL GEE++ +
Sbjct: 192 YVIQKVFEICSENQRATLLSRIRLHAHALKKYTYGKHIVARFEQLLGEENQTN 244