BLASTX nr result

ID: Jatropha_contig00005698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00005698
         (468 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF04428.2| hypothetical protein POPTR_0016s04670g [Populus t...    72   9e-11
gb|ERP51536.1| hypothetical protein POPTR_0016s04570g [Populus t...    72   9e-11
ref|XP_002322667.1| predicted protein [Populus trichocarpa]            72   9e-11
gb|AFN53709.1| hypothetical protein [Linum usitatissimum]              69   5e-10
gb|EMJ03872.1| hypothetical protein PRUPE_ppa012476mg [Prunus pe...    45   1e-06

>gb|EEF04428.2| hypothetical protein POPTR_0016s04670g [Populus trichocarpa]
          Length = 196

 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = -2

Query: 248 QMSAMPGHGTGQPYGGEVDPTGLTRTRPSGLPGDTTGHNPR 126
           QMSAMPGHGTGQPYGG+V+  G+ RT P GLPGDTTGHN R
Sbjct: 127 QMSAMPGHGTGQPYGGQVE-EGVARTHPGGLPGDTTGHNTR 166


>gb|ERP51536.1| hypothetical protein POPTR_0016s04570g [Populus trichocarpa]
          Length = 208

 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = -2

Query: 248 QMSAMPGHGTGQPYGGEVDPTGLTRTRPSGLPGDTTGHNPR 126
           QMSAMPGHGTGQPYGG+V+  G+ RT P GLPGDTTGHN R
Sbjct: 139 QMSAMPGHGTGQPYGGQVE-EGVARTHPGGLPGDTTGHNTR 178


>ref|XP_002322667.1| predicted protein [Populus trichocarpa]
          Length = 175

 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = -2

Query: 248 QMSAMPGHGTGQPYGGEVDPTGLTRTRPSGLPGDTTGHNPR 126
           QMSAMPGHGTGQPYGG+V+  G+ RT P GLPGDTTGHN R
Sbjct: 106 QMSAMPGHGTGQPYGGQVE-EGVARTHPGGLPGDTTGHNTR 145


>gb|AFN53709.1| hypothetical protein [Linum usitatissimum]
          Length = 163

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 33/51 (64%), Positives = 35/51 (68%)
 Frame = -2

Query: 248 QMSAMPGHGTGQPYGGEVDPTGLTRTRPSGLPGDTTGHNPRV*GMACALAP 96
           QMSAMPGHGTGQPYGG VD  G+ R  PSGLPG+ TGHN R  G      P
Sbjct: 113 QMSAMPGHGTGQPYGGHVD-EGVARVHPSGLPGEQTGHNTRTGGTGTGHLP 162


>gb|EMJ03872.1| hypothetical protein PRUPE_ppa012476mg [Prunus persica]
          Length = 168

 Score = 45.4 bits (106), Expect(2) = 1e-06
 Identities = 31/85 (36%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
 Frame = -2

Query: 362 AKAGGHVQYTTAGPGAQXXXXXXXXXXXXXXXXXXXTQQMSAMPGHGTGQPYGGEVDPTG 183
           A  GG   YTT+G G                       QMSA+PGHGTGQP G   +  G
Sbjct: 80  ASVGGPTGYTTSGTGTHTYSPTGATGQPTGA------HQMSALPGHGTGQPTGQVTE--G 131

Query: 182 LTRTRPSGL---PGDTTGHNPRV*G 117
           +  + P G+    G T  HN RV G
Sbjct: 132 VVESHPIGINTGTGWTAAHNTRVGG 156



 Score = 32.7 bits (73), Expect(2) = 1e-06
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = -1

Query: 468 PVQKEMAREKKEERNTEAELRK 403
           PV+K+MA +K+EER  EAEL K
Sbjct: 45  PVEKDMATQKREERMVEAELNK 66


Top