BLASTX nr result

ID: Jatropha_contig00005485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00005485
         (382 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW90149.2| oleosin 2 [Jatropha curcas] gi|399105971|gb|AFP19...    74   2e-11
ref|XP_004142849.1| PREDICTED: oleosin 18.2 kDa-like [Cucumis sa...    47   4e-07

>gb|ABW90149.2| oleosin 2 [Jatropha curcas] gi|399105971|gb|AFP19884.1| 16.6 kDa
           oleosin [Jatropha curcas]
          Length = 155

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/65 (58%), Positives = 41/65 (63%)
 Frame = +2

Query: 83  RVHPQHRYEAAFKGQQKGPSAQKELAVITLLPXXXXXXXXXXXXXXXXXXXXXXNTPLYV 262
           +VHPQHRYEAAFKGQQKGPSAQK LAVITLLP                       TPL+V
Sbjct: 11  QVHPQHRYEAAFKGQQKGPSAQKVLAVITLLPVGGGLLALAGITLVGTLIGLAITTPLFV 70

Query: 263 LFSPV 277
           +FSPV
Sbjct: 71  IFSPV 75


>ref|XP_004142849.1| PREDICTED: oleosin 18.2 kDa-like [Cucumis sativus]
           gi|449483909|ref|XP_004156729.1| PREDICTED: oleosin 18.2
           kDa-like [Cucumis sativus]
          Length = 165

 Score = 47.4 bits (111), Expect(2) = 4e-07
 Identities = 24/72 (33%), Positives = 36/72 (50%)
 Frame = +2

Query: 83  RVHPQHRYEAAFKGQQKGPSAQKELAVITLLPXXXXXXXXXXXXXXXXXXXXXXNTPLYV 262
           +VHPQ RY    +G   GPSA K +AV+TL+P                      +TP+++
Sbjct: 11  QVHPQQRYHHQHQGSGGGPSASKIIAVVTLVPVGGTLLGLSGLTLAATLFGLAVSTPVFL 70

Query: 263 LFSPVTCTSCIS 298
           LFSPV   + ++
Sbjct: 71  LFSPVIVPAALA 82



 Score = 32.0 bits (71), Expect(2) = 4e-07
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +3

Query: 282 VPAALVIGLSVMASMATGAMGLTGLSSI 365
           VPAAL I L++ A + +G  GLT LSS+
Sbjct: 77  VPAALAICLAIAAFLTSGVFGLTALSSL 104


Top