BLASTX nr result

ID: Jatropha_contig00005369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00005369
         (482 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510159.1| conserved hypothetical protein [Ricinus comm...    68   2e-18
gb|ABK95871.1| unknown [Populus trichocarpa]                           61   3e-18
ref|XP_002301164.1| predicted protein [Populus trichocarpa]            59   4e-18
gb|ERP64296.1| hypothetical protein POPTR_0002s12430g [Populus t...    58   7e-18
gb|EEE80437.2| hypothetical protein POPTR_0002s12430g [Populus t...    58   4e-17
gb|EMJ27271.1| hypothetical protein PRUPE_ppa014020mg [Prunus pe...    39   2e-06
ref|XP_004291066.1| PREDICTED: uncharacterized protein LOC101292...    45   4e-06

>ref|XP_002510159.1| conserved hypothetical protein [Ricinus communis]
           gi|223550860|gb|EEF52346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 82

 Score = 67.8 bits (164), Expect(2) = 2e-18
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = +2

Query: 32  MNSQGTERVNEEGAIETKVDTVDYRSSAAQEEPNKEKVGVVTL 160
           MN+QGTERVNEEGAIET VDT+DYR+ A  +EP KE VGVV L
Sbjct: 1   MNTQGTERVNEEGAIETTVDTIDYRTPAGADEPRKENVGVVHL 43



 Score = 50.4 bits (119), Expect(2) = 2e-18
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = +1

Query: 154 HLTRQKRDSGSGDGILARTAAAVTNTLRSAKDAVVGRGKD 273
           HL R K +     G+LARTAAAVTNT+ SAKDA+VG+ KD
Sbjct: 42  HLKRNKEEDS---GVLARTAAAVTNTIESAKDAIVGKSKD 78


>gb|ABK95871.1| unknown [Populus trichocarpa]
          Length = 86

 Score = 61.2 bits (147), Expect(2) = 3e-18
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = +2

Query: 32  MNSQGTERVNEEGAIETKVDTVDYRSSAAQEEPNKEKVGVVTL 160
           M +QGTER+NEEG  ET+V+TVD+R SA Q EP  EKVGVV L
Sbjct: 1   MKTQGTERINEEGEAETRVETVDHRKSAGQGEPTDEKVGVVHL 43



 Score = 56.2 bits (134), Expect(2) = 3e-18
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = +1

Query: 154 HLTRQKRDSGSGDGILARTAAAVTNTLRSAKDAVVGRGKDKDST 285
           HL R  RDSGSG GIL+   AAVTNT +SAKDA++G G+ KD+T
Sbjct: 42  HLKRNTRDSGSGGGILSSAVAAVTNTFKSAKDAIMG-GRGKDNT 84


>ref|XP_002301164.1| predicted protein [Populus trichocarpa]
          Length = 87

 Score = 58.9 bits (141), Expect(2) = 4e-18
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +2

Query: 41  QGTERVNEEGAIETKVDTVDYRSSAAQEEPNKEKVGVVTL 160
           QGTER+NEEG  ET+V+TVD+R SA Q EP  EKVGVV L
Sbjct: 5   QGTERINEEGEAETRVETVDHRKSAGQGEPTDEKVGVVHL 44



 Score = 57.8 bits (138), Expect(2) = 4e-18
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 154 HLTRQKRDSGSGDGILARTAAAVTNTLRSAKDAVVGRGKDKDST 285
           HL R  RDSGSG GIL+  AAAVTNT +SAKDA++G G+ KD+T
Sbjct: 43  HLKRNTRDSGSGGGILSSAAAAVTNTFKSAKDAIMG-GRGKDNT 85


>gb|ERP64296.1| hypothetical protein POPTR_0002s12430g [Populus trichocarpa]
          Length = 86

 Score = 58.2 bits (139), Expect(2) = 7e-18
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +2

Query: 32  MNSQGTERVNEEGAIETKVDTVDYRSSAAQEEPNKEKVGVVTL 160
           M +Q TER+NEEG  ET+V+TVD+R SA Q EP  EKVGVV L
Sbjct: 1   MKTQETERINEEGEAETRVETVDHRKSAGQGEPTDEKVGVVHL 43



 Score = 57.8 bits (138), Expect(2) = 7e-18
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 154 HLTRQKRDSGSGDGILARTAAAVTNTLRSAKDAVVGRGKDKDST 285
           HL R  RDSGSG GIL+  AAAVTNT +SAKDA++G G+ KD+T
Sbjct: 42  HLKRNTRDSGSGGGILSSAAAAVTNTFKSAKDAIMG-GRGKDNT 84


>gb|EEE80437.2| hypothetical protein POPTR_0002s12430g [Populus trichocarpa]
          Length = 87

 Score = 57.8 bits (138), Expect(2) = 4e-17
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 154 HLTRQKRDSGSGDGILARTAAAVTNTLRSAKDAVVGRGKDKDST 285
           HL R  RDSGSG GIL+  AAAVTNT +SAKDA++G G+ KD+T
Sbjct: 43  HLKRNTRDSGSGGGILSSAAAAVTNTFKSAKDAIMG-GRGKDNT 85



 Score = 55.8 bits (133), Expect(2) = 4e-17
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = +2

Query: 41  QGTERVNEEGAIETKVDTVDYRSSAAQEEPNKEKVGVVTL 160
           Q TER+NEEG  ET+V+TVD+R SA Q EP  EKVGVV L
Sbjct: 5   QETERINEEGEAETRVETVDHRKSAGQGEPTDEKVGVVHL 44


>gb|EMJ27271.1| hypothetical protein PRUPE_ppa014020mg [Prunus persica]
          Length = 90

 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = +1

Query: 154 HLTRQKRDSGSG-DGILARTAAAVTNTLRSAKDAVVGRGKDK 276
           H T+   +SG+G  G+LA  AAAV+N  +SAK+AV G  KD+
Sbjct: 45  HETKDGANSGTGAGGVLAGAAAAVSNAFQSAKNAVSGSAKDQ 86



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
 Frame = +2

Query: 47  TERVNEEGAIETKV-DTVDYRSSAAQE-EPNKEKVGVV 154
           TE   E+G +E KV DTVDYRS A ++ +P KE+V VV
Sbjct: 7   TEEKKEQGGVEIKVVDTVDYRSPAGEDKKPTKEEVEVV 44


>ref|XP_004291066.1| PREDICTED: uncharacterized protein LOC101292566 [Fragaria vesca
           subsp. vesca]
          Length = 105

 Score = 44.7 bits (104), Expect(2) = 4e-06
 Identities = 22/37 (59%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
 Frame = +2

Query: 47  TERVNEEGAIETKVDTVDYRSSAAQE-EPNKEKVGVV 154
           TE VNE+G +E KVDTVD+RS A  + EP KEKV ++
Sbjct: 8   TEGVNEQGGVEVKVDTVDFRSPAGDDKEPVKEKVEIL 44



 Score = 31.6 bits (70), Expect(2) = 4e-06
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +1

Query: 193 GILARTAAAVTNTLRSAKDAVVGRGKD 273
           G + + A AV +T +SAKDAV G+ KD
Sbjct: 61  GFVEKAATAVADTFKSAKDAVSGKPKD 87


Top