BLASTX nr result
ID: Jatropha_contig00005292
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00005292
(546 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320894.1| predicted protein [Populus trichocarpa] gi|2... 110 3e-22
ref|XP_002529977.1| nucleolar phosphoprotein, putative [Ricinus ... 108 8e-22
gb|ERP64439.1| hypothetical protein POPTR_0002s17880g [Populus t... 108 1e-21
ref|XP_002302667.1| predicted protein [Populus trichocarpa] 108 1e-21
gb|ESR48912.1| hypothetical protein CICLE_v10031378mg [Citrus cl... 106 3e-21
gb|EOX95603.1| RNA-binding family protein isoform 1 [Theobroma c... 103 3e-20
ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleop... 103 3e-20
gb|EMJ19130.1| hypothetical protein PRUPE_ppa004918mg [Prunus pe... 99 6e-19
ref|XP_004306621.1| PREDICTED: heterogeneous nuclear ribonucleop... 98 1e-18
ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleop... 96 5e-18
ref|XP_004494860.1| PREDICTED: heterogeneous nuclear ribonucleop... 94 3e-17
ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleop... 92 6e-17
gb|ESW11004.1| hypothetical protein PHAVU_009G257300g [Phaseolus... 92 1e-16
ref|XP_003626597.1| RNA-binding protein [Medicago truncatula] gi... 92 1e-16
gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif);... 92 1e-16
gb|ERP53181.1| hypothetical protein POPTR_0014s10030g [Populus t... 89 2e-16
gb|AGJ98235.1| PIB81 RNA recognition motif containing protein, p... 90 3e-16
gb|EOX95604.1| RNA-binding family protein isoform 2 [Theobroma c... 89 5e-16
ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleop... 89 5e-16
ref|XP_004494862.1| PREDICTED: heterogeneous nuclear ribonucleop... 89 6e-16
>ref|XP_002320894.1| predicted protein [Populus trichocarpa] gi|222861667|gb|EEE99209.1|
hypothetical protein POPTR_0014s10030g [Populus
trichocarpa] gi|550323869|gb|ERP53180.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
gi|550323871|gb|ERP53182.1| hypothetical protein
POPTR_0014s10030g [Populus trichocarpa]
Length = 480
Score = 110 bits (274), Expect = 3e-22
Identities = 50/55 (90%), Positives = 53/55 (96%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
GFGV++SFQQPVIYGRGPMPAGMHMVPMVLPDG+IGYVLQQP V MPQPRPRRVD
Sbjct: 399 GFGVASSFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPQPRPRRVD 453
>ref|XP_002529977.1| nucleolar phosphoprotein, putative [Ricinus communis]
gi|223530539|gb|EEF32420.1| nucleolar phosphoprotein,
putative [Ricinus communis]
Length = 557
Score = 108 bits (270), Expect = 8e-22
Identities = 49/55 (89%), Positives = 53/55 (96%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
GFGV++SFQQPVIYGRGPMPAGMHMVPMVLPDG+IGYVLQQP V MPQPRPRRV+
Sbjct: 372 GFGVASSFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPQPRPRRVE 426
>gb|ERP64439.1| hypothetical protein POPTR_0002s17880g [Populus trichocarpa]
Length = 137
Score = 108 bits (269), Expect = 1e-21
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
GFGV+A FQQPVIYGRGPMPAGMHMVPMVLPDG+IGYVLQQP V MPQP+PRRVD
Sbjct: 56 GFGVAAGFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPQPQPRRVD 110
>ref|XP_002302667.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 108 bits (269), Expect = 1e-21
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
GFGV+A FQQPVIYGRGPMPAGMHMVPMVLPDG+IGYVLQQP V MPQP+PRRVD
Sbjct: 313 GFGVAAGFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPQPQPRRVD 367
>gb|ESR48912.1| hypothetical protein CICLE_v10031378mg [Citrus clementina]
gi|557537869|gb|ESR48913.1| hypothetical protein
CICLE_v10031378mg [Citrus clementina]
Length = 482
Score = 106 bits (265), Expect = 3e-21
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
GFGV+A FQQP+IYGRGPMP+GMHMVPMVLPDGQIGYVLQQP V MP PRPRRVD
Sbjct: 399 GFGVAAGFQQPMIYGRGPMPSGMHMVPMVLPDGQIGYVLQQPGVQMPPPRPRRVD 453
>gb|EOX95603.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 506
Score = 103 bits (256), Expect = 3e-20
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
GFGV+ SFQQPVIYGRGPMP+GM MVPMVLPDG+IGYVLQQP V MP PRPRRVD
Sbjct: 396 GFGVATSFQQPVIYGRGPMPSGMQMVPMVLPDGRIGYVLQQPGVQMPPPRPRRVD 450
>ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Vitis
vinifera] gi|296088998|emb|CBI38701.3| unnamed protein
product [Vitis vinifera]
Length = 476
Score = 103 bits (256), Expect = 3e-20
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRR 387
G+GVSA FQQPVIYGRGPMPAGMHMVPMVLPDG+IGYVLQQP V MP PRPRR
Sbjct: 393 GYGVSAPFQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPPPRPRR 445
>gb|EMJ19130.1| hypothetical protein PRUPE_ppa004918mg [Prunus persica]
Length = 485
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/55 (80%), Positives = 48/55 (87%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
G+ V A FQQP+IYGRGPMPAGMHMVPMVLPDG+IGYVLQQP +P PRPRRVD
Sbjct: 403 GYSVPAGFQQPMIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGAQIPTPRPRRVD 457
>ref|XP_004306621.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Fragaria
vesca subsp. vesca]
Length = 481
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
GFGV+ +FQQP+IYGRGPMP+GM MVPMVLPDG+IGYVLQQP V MP PRPRR D
Sbjct: 399 GFGVAPAFQQPMIYGRGPMPSGMQMVPMVLPDGRIGYVLQQPGVQMPPPRPRRGD 453
>ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
max]
Length = 483
Score = 95.9 bits (237), Expect = 5e-18
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
G+GV+A +QQP+IYGRGPMPAGM MVPMVLPDG+IGYVLQQP V +P RPRR+D
Sbjct: 398 GYGVAAGYQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPATRPRRID 452
>ref|XP_004494860.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform
X1 [Cicer arietinum] gi|502114100|ref|XP_004494861.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
R-like isoform X2 [Cicer arietinum]
Length = 481
Score = 93.6 bits (231), Expect = 3e-17
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
G+GV+A +QQP+IYGRGPMPAGM MVPMVLPDG+IGYVLQQP V +P RPRR D
Sbjct: 398 GYGVAAGYQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPATRPRRND 452
>ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
max]
Length = 483
Score = 92.4 bits (228), Expect = 6e-17
Identities = 41/55 (74%), Positives = 48/55 (87%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
G+GV+A +QQP+IYGRGPMPAGM MVPM+LPDG+IGYVLQQP V +P RPRR D
Sbjct: 398 GYGVAAGYQQPMIYGRGPMPAGMQMVPMMLPDGRIGYVLQQPGVQVPPARPRRND 452
>gb|ESW11004.1| hypothetical protein PHAVU_009G257300g [Phaseolus vulgaris]
Length = 489
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
G+GV +QQP+IYGRGPMPAGM MVPMVLPDG+IGYVLQQP V P RPRR++
Sbjct: 399 GYGVGGGYQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQAPPSRPRRIE 453
>ref|XP_003626597.1| RNA-binding protein [Medicago truncatula]
gi|355501612|gb|AES82815.1| RNA-binding protein
[Medicago truncatula]
Length = 479
Score = 91.7 bits (226), Expect = 1e-16
Identities = 43/57 (75%), Positives = 50/57 (87%), Gaps = 2/57 (3%)
Frame = -2
Query: 545 GFGVSAS--FQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
G+GV+A+ +QQP+IYGRGPMPAGM MVPMVLPDG+IGYVLQQP V +P PRPRR D
Sbjct: 397 GYGVAAAAAYQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPGPRPRRND 453
>gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif); Calcium-binding
EF-hand [Medicago truncatula]
Length = 559
Score = 91.7 bits (226), Expect = 1e-16
Identities = 43/57 (75%), Positives = 50/57 (87%), Gaps = 2/57 (3%)
Frame = -2
Query: 545 GFGVSAS--FQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
G+GV+A+ +QQP+IYGRGPMPAGM MVPMVLPDG+IGYVLQQP V +P PRPRR D
Sbjct: 477 GYGVAAAAAYQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPGPRPRRND 533
>gb|ERP53181.1| hypothetical protein POPTR_0014s10030g [Populus trichocarpa]
Length = 477
Score = 88.6 bits (218), Expect(2) = 2e-16
Identities = 45/64 (70%), Positives = 48/64 (75%)
Frame = -3
Query: 487 QQGCIWCQWFYLMVKLAMFFSSLECTCHNLGLGESIGAMVLVGLDEPEVVEMMAIVAEDT 308
QQGCIWCQWFY MV+LAM FSSLE CH+LGL E IG MV VGL E +V MMAI E T
Sbjct: 407 QQGCIWCQWFYQMVELAMSFSSLEYRCHSLGLEELIGTMVQVGLGELVIVAMMAIGEEGT 466
Query: 307 VLIS 296
LIS
Sbjct: 467 GLIS 470
Score = 22.7 bits (47), Expect(2) = 2e-16
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2
Query: 545 GFGVSASFQQPVIY 504
GFGV++SFQQ I+
Sbjct: 399 GFGVASSFQQGCIW 412
>gb|AGJ98235.1| PIB81 RNA recognition motif containing protein, partial [Petunia x
hybrida]
Length = 153
Score = 90.1 bits (222), Expect = 3e-16
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
G+G +A++QQP+IYGRGPMP+GM MVPMVLPDGQIGYVLQQP V P RP+R D
Sbjct: 68 GYGATAAYQQPMIYGRGPMPSGMQMVPMVLPDGQIGYVLQQPGVQAPAVRPQRND 122
>gb|EOX95604.1| RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 493
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/57 (73%), Positives = 46/57 (80%), Gaps = 2/57 (3%)
Frame = -2
Query: 545 GFG--VSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
G+G A + PVIYGRGPMP+GM MVPMVLPDG+IGYVLQQP V MP PRPRRVD
Sbjct: 381 GYGGFTGAPYASPVIYGRGPMPSGMQMVPMVLPDGRIGYVLQQPGVQMPPPRPRRVD 437
>ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus] gi|449477982|ref|XP_004155183.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus]
Length = 481
Score = 89.4 bits (220), Expect = 5e-16
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHMVPMVLPDGQIGYVLQQPRVHMPQPRPRR 387
G+GV+A F QP+IYGRGPMPAGM MVPMVLPDG+IGYVLQQP V MP R RR
Sbjct: 397 GYGVTAGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRR 449
>ref|XP_004494862.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform
X3 [Cicer arietinum]
Length = 482
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/56 (75%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
Frame = -2
Query: 545 GFGVSASFQQPVIYGRGPMPAGMHM-VPMVLPDGQIGYVLQQPRVHMPQPRPRRVD 381
G+GV+A +QQP+IYGRGPMPAGM M VPMVLPDG+IGYVLQQP V +P RPRR D
Sbjct: 398 GYGVAAGYQQPMIYGRGPMPAGMQMMVPMVLPDGRIGYVLQQPGVQVPATRPRRND 453