BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00005193
         (372 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005652188.1| hypothetical protein COCSUDRAFT_26843 [Cocco...    74   2e-11
ref|XP_002317630.1| predicted protein [Populus trichocarpa] gi|3...    72   3e-11
gb|EEC78536.1| hypothetical protein OsI_18488 [Oryza sativa Indi...    72   5e-11
emb|CBI25651.3| unnamed protein product [Vitis vinifera]               70   1e-10
tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III ...    71   2e-10
ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, I...    69   2e-10
ref|XP_002527516.1| DNA-directed RNA polymerases I, II, and III ...    69   2e-10
ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, part...    70   3e-10
ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, I...    70   3e-10
ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp....    70   3e-10
ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, I...    70   3e-10
gb|EEE98242.2| hypothetical protein POPTR_0011s14790g, partial [...    69   5e-10
ref|XP_003528316.1| PREDICTED: DNA-directed RNA polymerases I, I...    69   5e-10
gb|EEE62363.1| hypothetical protein OsJ_17152 [Oryza sativa Japo...    69   5e-10
ref|NP_001151371.1| LOC100285004 [Zea mays] gi|297720059|ref|NP_...    69   5e-10
ref|XP_001784402.1| predicted protein [Physcomitrella patens] gi...    68   1e-09
gb|ABK22384.1| unknown [Picea sitchensis] gi|116790944|gb|ABK257...    68   1e-09
gb|ABK21111.1| unknown [Picea sitchensis]                              68   1e-09
gb|ESQ46859.1| hypothetical protein EUTSA_v10028022mg [Eutrema s...    67   3e-09
gb|ESQ30049.1| hypothetical protein EUTSA_v10011934mg [Eutrema s...    67   3e-09

>ref|XP_005652188.1| hypothetical protein COCSUDRAFT_26843 [Coccomyxa subellipsoidea
           C-169] gi|384254170|gb|EIE27644.1| hypothetical protein
           COCSUDRAFT_26843 [Coccomyxa subellipsoidea C-169]
          Length = 60

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/52 (67%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
 Frame = -1

Query: 372 VPGPPKTLERAQTNGSS-TRADCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           +PG P+  + A  +G + T  DCG ENTLKPGDVI+CRECGYRILYKKRTRR
Sbjct: 2   LPGQPQQQQYAPNSGVAYTCGDCGHENTLKPGDVIRCRECGYRILYKKRTRR 53


>ref|XP_002317630.1| predicted protein [Populus trichocarpa]
           gi|356531072|ref|XP_003534102.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4-like
           [Glycine max] gi|356560019|ref|XP_003548293.1|
           PREDICTED: DNA-directed RNA polymerases I, II, and III
           subunit RPABC4 [Glycine max] gi|255630274|gb|ACU15492.1|
           unknown [Glycine max] gi|557551016|gb|ESR61645.1|
           hypothetical protein CICLE_v10017429mg [Citrus
           clementina] gi|561025849|gb|ESW24534.1| hypothetical
           protein PHAVU_004G138700g [Phaseolus vulgaris]
          Length = 51

 Score = 71.6 bits (174), Expect(2) = 3e-11
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCGMENTLKPGDVIQCRECGYRILYKKRTRR
Sbjct: 14  DCGMENTLKPGDVIQCRECGYRILYKKRTRR 44



 Score = 21.9 bits (45), Expect(2) = 3e-11
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 332 MDPQPEPI 309
           MDPQPEP+
Sbjct: 1   MDPQPEPV 8


>gb|EEC78536.1| hypothetical protein OsI_18488 [Oryza sativa Indica Group]
          Length = 87

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRRHC 214
           DCG ENTLKPGDVIQCRECGYRILYKKRTRR C
Sbjct: 15  DCGAENTLKPGDVIQCRECGYRILYKKRTRRSC 47


>emb|CBI25651.3| unnamed protein product [Vitis vinifera]
          Length = 82

 Score = 69.7 bits (169), Expect(2) = 1e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCG ENTLKPGDVIQCRECGYRILYKKRTRR
Sbjct: 14  DCGQENTLKPGDVIQCRECGYRILYKKRTRR 44



 Score = 21.9 bits (45), Expect(2) = 1e-10
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 332 MDPQPEPI 309
           MDPQPEP+
Sbjct: 1   MDPQPEPV 8


>tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III polypeptide isoform
           1, partial [Zea mays] gi|414884444|tpg|DAA60458.1| TPA:
           DNA-directed RNA polymerase I, II, and III polypeptide
           isoform 2, partial [Zea mays]
          Length = 100

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/52 (67%), Positives = 37/52 (71%), Gaps = 6/52 (11%)
 Frame = -1

Query: 357 KTLERAQTNGSSTR------ADCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           KTLER+  +            DCG ENTLKPGDVIQCRECGYRILYKKRTRR
Sbjct: 42  KTLERSTMDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRR 93


>ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Cucumis sativus]
           gi|449516854|ref|XP_004165461.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4-like
           [Cucumis sativus]
          Length = 51

 Score = 68.6 bits (166), Expect(2) = 2e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCGMENTLK GDVIQCRECGYRILYKKRTRR
Sbjct: 14  DCGMENTLKQGDVIQCRECGYRILYKKRTRR 44



 Score = 21.9 bits (45), Expect(2) = 2e-10
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 332 MDPQPEPI 309
           MDPQPEP+
Sbjct: 1   MDPQPEPV 8


>ref|XP_002527516.1| DNA-directed RNA polymerases I, II, and III 7.0 kDa polypeptide,
           putative [Ricinus communis] gi|223533156|gb|EEF34914.1|
           DNA-directed RNA polymerases I, II, and III 7.0 kDa
           polypeptide, putative [Ricinus communis]
          Length = 51

 Score = 68.6 bits (166), Expect(2) = 2e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCGMENTLK GDVIQCRECGYRILYKKRTRR
Sbjct: 14  DCGMENTLKQGDVIQCRECGYRILYKKRTRR 44



 Score = 21.9 bits (45), Expect(2) = 2e-10
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 332 MDPQPEPI 309
           MDPQPEP+
Sbjct: 1   MDPQPEPV 8


>ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, partial [Capsella rubella]
           gi|482553592|gb|EOA17785.1| hypothetical protein
           CARUB_v10006178mg, partial [Capsella rubella]
          Length = 68

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCG ENTLKPGDVIQCRECGYRILYKKRTRR
Sbjct: 31  DCGQENTLKPGDVIQCRECGYRILYKKRTRR 61


>ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Solanum lycopersicum]
          Length = 52

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCG ENTLKPGDVIQCRECGYRILYKKRTRR
Sbjct: 15  DCGQENTLKPGDVIQCRECGYRILYKKRTRR 45


>ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316495|gb|EFH46918.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 52

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCG ENTLKPGDVIQCRECGYRILYKKRTRR
Sbjct: 15  DCGQENTLKPGDVIQCRECGYRILYKKRTRR 45


>ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Vitis vinifera]
           gi|225468167|ref|XP_002272054.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4 [Vitis
           vinifera] gi|297738145|emb|CBI27346.3| unnamed protein
           product [Vitis vinifera]
          Length = 51

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCG ENTLKPGDVIQCRECGYRILYKKRTRR
Sbjct: 14  DCGQENTLKPGDVIQCRECGYRILYKKRTRR 44


>gb|EEE98242.2| hypothetical protein POPTR_0011s14790g, partial [Populus
           trichocarpa]
          Length = 62

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -1

Query: 309 CGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           CGMENTLKPGDVIQCRECGYRILYKKRTRR
Sbjct: 1   CGMENTLKPGDVIQCRECGYRILYKKRTRR 30


>ref|XP_003528316.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC4-like [Glycine max]
          Length = 47

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCGMENTLKP DVIQCRECGYRILYKKRTRR
Sbjct: 14  DCGMENTLKPSDVIQCRECGYRILYKKRTRR 44


>gb|EEE62363.1| hypothetical protein OsJ_17152 [Oryza sativa Japonica Group]
          Length = 50

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCG ENTLKPGDVIQCRECGYRILYKKRTRR
Sbjct: 15  DCGAENTLKPGDVIQCRECGYRILYKKRTRR 45


>ref|NP_001151371.1| LOC100285004 [Zea mays] gi|297720059|ref|NP_001172391.1|
           Os01g0530366 [Oryza sativa Japonica Group]
           gi|297723715|ref|NP_001174221.1| Os05g0151800 [Oryza
           sativa Japonica Group] gi|242048352|ref|XP_002461922.1|
           hypothetical protein SORBIDRAFT_02g010660 [Sorghum
           bicolor] gi|242078439|ref|XP_002443988.1| hypothetical
           protein SORBIDRAFT_07g005435 [Sorghum bicolor]
           gi|514726952|ref|XP_004956106.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC4-like
           [Setaria italica] gi|195609858|gb|ACG26759.1|
           DNA-directed RNA polymerases I, II, and III 7.3 kDa
           polypeptide [Zea mays] gi|195620974|gb|ACG32317.1|
           DNA-directed RNA polymerases I, II, and III 7.3 kDa
           polypeptide [Zea mays] gi|195645780|gb|ACG42358.1|
           DNA-directed RNA polymerases I, II, and III 7.3 kDa
           polypeptide [Zea mays] gi|195646246|gb|ACG42591.1|
           DNA-directed RNA polymerases I, II, and III 7.3 kDa
           polypeptide [Zea mays] gi|218188380|gb|EEC70807.1|
           hypothetical protein OsI_02267 [Oryza sativa Indica
           Group] gi|222618595|gb|EEE54727.1| hypothetical protein
           OsJ_02072 [Oryza sativa Japonica Group]
           gi|241925299|gb|EER98443.1| hypothetical protein
           SORBIDRAFT_02g010660 [Sorghum bicolor]
           gi|241940338|gb|EES13483.1| hypothetical protein
           SORBIDRAFT_07g005435 [Sorghum bicolor]
           gi|255673311|dbj|BAH91121.1| Os01g0530366 [Oryza sativa
           Japonica Group] gi|255676033|dbj|BAH92949.1|
           Os05g0151800 [Oryza sativa Japonica Group]
          Length = 52

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCG ENTLKPGDVIQCRECGYRILYKKRTRR
Sbjct: 15  DCGAENTLKPGDVIQCRECGYRILYKKRTRR 45


>ref|XP_001784402.1| predicted protein [Physcomitrella patens]
           gi|162664073|gb|EDQ50807.1| predicted protein
           [Physcomitrella patens]
          Length = 56

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCG +NTLKPGDVIQCRECGYRILYKKRTRR
Sbjct: 19  DCGADNTLKPGDVIQCRECGYRILYKKRTRR 49


>gb|ABK22384.1| unknown [Picea sitchensis] gi|116790944|gb|ABK25799.1| unknown
           [Picea sitchensis] gi|148909877|gb|ABR18025.1| unknown
           [Picea sitchensis] gi|224284970|gb|ACN40214.1| unknown
           [Picea sitchensis] gi|224286085|gb|ACN40753.1| unknown
           [Picea sitchensis]
          Length = 53

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCG EN+LKPGDVIQCRECGYRILYKKRTRR
Sbjct: 16  DCGAENSLKPGDVIQCRECGYRILYKKRTRR 46


>gb|ABK21111.1| unknown [Picea sitchensis]
          Length = 53

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCG EN+LKPGDVIQCRECGYRILYKKRTRR
Sbjct: 16  DCGAENSLKPGDVIQCRECGYRILYKKRTRR 46


>gb|ESQ46859.1| hypothetical protein EUTSA_v10028022mg [Eutrema salsugineum]
          Length = 51

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/31 (93%), Positives = 29/31 (93%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCG ENTLK GDVIQCRECGYRILYKKRTRR
Sbjct: 14  DCGQENTLKSGDVIQCRECGYRILYKKRTRR 44


>gb|ESQ30049.1| hypothetical protein EUTSA_v10011934mg [Eutrema salsugineum]
           gi|557089342|gb|ESQ30050.1| hypothetical protein
           EUTSA_v10011934mg [Eutrema salsugineum]
           gi|557089343|gb|ESQ30051.1| hypothetical protein
           EUTSA_v10011934mg [Eutrema salsugineum]
          Length = 51

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/31 (93%), Positives = 29/31 (93%)
 Frame = -1

Query: 312 DCGMENTLKPGDVIQCRECGYRILYKKRTRR 220
           DCG ENTLK GDVIQCRECGYRILYKKRTRR
Sbjct: 14  DCGQENTLKSGDVIQCRECGYRILYKKRTRR 44