BLASTX nr result
ID: Jatropha_contig00005000
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00005000
(461 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAJ53172.1| JHL18I08.6 [Jatropha curcas] 129 4e-32
ref|XP_002510462.1| Dehydration-responsive element-binding prote... 92 1e-18
gb|EOY14886.1| Dehydration-responsive element-binding protein 2G... 80 8e-16
gb|ESR48324.1| hypothetical protein CICLE_v10002280mg [Citrus cl... 73 4e-13
gb|ABP64694.1| putative DRE-binding protein 5 [Populus trichocar... 74 1e-12
ref|XP_002306897.1| AP2/ERF domain-containing transcription fact... 74 1e-12
ref|XP_002302006.1| AP2/ERF domain-containing transcription fact... 69 5e-11
ref|XP_002280893.2| PREDICTED: dehydration-responsive element-bi... 67 2e-09
emb|CBI19777.3| unnamed protein product [Vitis vinifera] 67 2e-09
gb|EMJ27591.1| hypothetical protein PRUPE_ppa023248mg [Prunus pe... 67 3e-09
ref|XP_004292958.1| PREDICTED: dehydration-responsive element-bi... 64 2e-08
ref|XP_003527879.1| PREDICTED: dehydration-responsive element-bi... 55 5e-08
ref|XP_003523563.1| PREDICTED: dehydration-responsive element-bi... 54 1e-07
>dbj|BAJ53172.1| JHL18I08.6 [Jatropha curcas]
Length = 238
Score = 129 bits (325), Expect(2) = 4e-32
Identities = 61/62 (98%), Positives = 61/62 (98%)
Frame = +2
Query: 5 GTVVEEEANFWQNQQGIDDLWGNLNVNLPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMD 184
GTVVEEEAN WQNQQGIDDLWGNLNVNLPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMD
Sbjct: 166 GTVVEEEANLWQNQQGIDDLWGNLNVNLPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMD 225
Query: 185 VT 190
VT
Sbjct: 226 VT 227
Score = 33.9 bits (76), Expect(2) = 4e-32
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 192 GWDALHTPWCM 224
GWDALHTPWCM
Sbjct: 228 GWDALHTPWCM 238
>ref|XP_002510462.1| Dehydration-responsive element-binding protein 2G, putative
[Ricinus communis] gi|223551163|gb|EEF52649.1|
Dehydration-responsive element-binding protein 2G,
putative [Ricinus communis]
Length = 247
Score = 92.0 bits (227), Expect(2) = 1e-18
Identities = 46/59 (77%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
Frame = +2
Query: 20 EEANFWQNQQG--IDDLWGNLNVNLPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMDVT 190
E + + QNQ+G I++LW NLNVNLPLFDDSIWAEAAMSIDFPAMED GIFASNLMD T
Sbjct: 178 EASIYGQNQEGAGINELWENLNVNLPLFDDSIWAEAAMSIDFPAMEDPGIFASNLMDGT 236
Score = 26.6 bits (57), Expect(2) = 1e-18
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 195 WDALHTPWC 221
WDAL TPWC
Sbjct: 238 WDALQTPWC 246
>gb|EOY14886.1| Dehydration-responsive element-binding protein 2G, putative
[Theobroma cacao]
Length = 235
Score = 79.7 bits (195), Expect(2) = 8e-16
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = +2
Query: 5 GTVVEEEANFWQNQQGIDDLWGNLNVNLPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMD 184
G + E A F QN+ GID W N++VNLP+ DDSIWAEAAMS+DFP M++ G F +D
Sbjct: 163 GNLAENNAKFGQNEDGIDGFWENMSVNLPVLDDSIWAEAAMSLDFPVMDNPGSFTGTFVD 222
Query: 185 VT 190
T
Sbjct: 223 AT 224
Score = 29.3 bits (64), Expect(2) = 8e-16
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3
Query: 192 GWDALHTPWCM 224
GWDAL +PWCM
Sbjct: 225 GWDALQSPWCM 235
>gb|ESR48324.1| hypothetical protein CICLE_v10002280mg [Citrus clementina]
Length = 248
Score = 73.2 bits (178), Expect(2) = 4e-13
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = +2
Query: 5 GTVVEEEANFWQNQQGIDDLWGNLNVNLPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMD 184
G + E E F N+Q D W NLNVN P+FD+SIWAEAAMS+D+P M + G+ +N +D
Sbjct: 174 GKLAENEVKFSLNEQETDGFWENLNVNSPVFDESIWAEAAMSVDYPVMGEQGLLNANFVD 233
Query: 185 VTRMG 199
+ G
Sbjct: 234 ASCCG 238
Score = 26.6 bits (57), Expect(2) = 4e-13
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3
Query: 192 GWDALHTPWCM 224
GWD L TPWC+
Sbjct: 238 GWDMLPTPWCV 248
>gb|ABP64694.1| putative DRE-binding protein 5 [Populus trichocarpa]
gi|550339727|gb|EEE93893.2| hypothetical protein
POPTR_0005s25470g [Populus trichocarpa]
Length = 244
Score = 74.3 bits (181), Expect(2) = 1e-12
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = +2
Query: 23 EANFWQNQQGIDDLWGNLNVNLPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMDVT 190
E NF +++ I + W N NVN+P FDDSIW EAAMSI+FP +ED GIFASNLM+ T
Sbjct: 179 EVNFGRSEVEIKEFWSNFNVNIP-FDDSIWVEAAMSINFPVVEDPGIFASNLMEGT 233
Score = 23.9 bits (50), Expect(2) = 1e-12
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 192 GWDALHTPWCM 224
G D L TPWCM
Sbjct: 234 GRDTLQTPWCM 244
>ref|XP_002306897.1| AP2/ERF domain-containing transcription factor [Populus
trichocarpa]
Length = 241
Score = 74.3 bits (181), Expect(2) = 1e-12
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = +2
Query: 23 EANFWQNQQGIDDLWGNLNVNLPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMDVT 190
E NF +++ I + W N NVN+P FDDSIW EAAMSI+FP +ED GIFASNLM+ T
Sbjct: 176 EVNFGRSEVEIKEFWSNFNVNIP-FDDSIWVEAAMSINFPVVEDPGIFASNLMEGT 230
Score = 23.9 bits (50), Expect(2) = 1e-12
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 192 GWDALHTPWCM 224
G D L TPWCM
Sbjct: 231 GRDTLQTPWCM 241
>ref|XP_002302006.1| AP2/ERF domain-containing transcription factor [Populus
trichocarpa] gi|222843732|gb|EEE81279.1| hypothetical
protein POPTR_0002s03090g [Populus trichocarpa]
Length = 240
Score = 69.3 bits (168), Expect(2) = 5e-11
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +2
Query: 5 GTVVEEEANFWQNQQGIDDLWGNLNVNLPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMD 184
G VE +ANF ++ I + NLNVN+ F+DSIWAEAA+SI+FP M+D GIFASNLM+
Sbjct: 169 GMEVENDANFGRSGDVIKEFSANLNVNMT-FNDSIWAEAALSINFPVMDDPGIFASNLME 227
Score = 23.5 bits (49), Expect(2) = 5e-11
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 192 GWDALHTPWCM 224
G D + TPWCM
Sbjct: 230 GGDTMQTPWCM 240
>ref|XP_002280893.2| PREDICTED: dehydration-responsive element-binding protein 2D-like
[Vitis vinifera]
Length = 222
Score = 67.0 bits (162), Expect = 2e-09
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +2
Query: 38 QNQQGIDDLWGNLNVNLPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMD 184
+N G++ +W N+NV LP DDS+W E MS+DFPA +DT IF SNL+D
Sbjct: 161 ENDDGMEGVWANMNVTLPKVDDSLWTETLMSMDFPAFDDTEIFGSNLVD 209
>emb|CBI19777.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 67.0 bits (162), Expect = 2e-09
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +2
Query: 38 QNQQGIDDLWGNLNVNLPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMD 184
+N G++ +W N+NV LP DDS+W E MS+DFPA +DT IF SNL+D
Sbjct: 140 ENDDGMEGVWANMNVTLPKVDDSLWTETLMSMDFPAFDDTEIFGSNLVD 188
>gb|EMJ27591.1| hypothetical protein PRUPE_ppa023248mg [Prunus persica]
Length = 255
Score = 66.6 bits (161), Expect = 3e-09
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = +2
Query: 65 WGNLNVNLPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMD 184
WGN++ N P+FDDSIW EAAMS+DFP +ED GIF+SN +D
Sbjct: 202 WGNVSGNFPMFDDSIWVEAAMSLDFPVIEDHGIFSSNFVD 241
>ref|XP_004292958.1| PREDICTED: dehydration-responsive element-binding protein 2C-like
[Fragaria vesca subsp. vesca]
Length = 259
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Frame = +2
Query: 38 QNQQGIDD-LWGNLNVN-LPLFDDSIWAEAAMSIDFPAMEDTGIFASNLMD 184
+ +G+D W N++ N LP+FDDSIWAEAAMS+DFP +E+ GIFASN +D
Sbjct: 196 EKYEGVDKRFWENVSTNVLPVFDDSIWAEAAMSLDFPVIENHGIFASNFVD 246
>ref|XP_003527879.1| PREDICTED: dehydration-responsive element-binding protein 2D-like
[Glycine max]
Length = 249
Score = 55.1 bits (131), Expect(2) = 5e-08
Identities = 27/44 (61%), Positives = 34/44 (77%), Gaps = 3/44 (6%)
Frame = +2
Query: 65 WGNLNVNLPLFDDSIWAEAAMSIDFPAM-EDTGIFAS--NLMDV 187
WG +N LP+FDDSIWAEAAMS+DFP + +T I++S NL DV
Sbjct: 194 WGTMNEGLPVFDDSIWAEAAMSLDFPQIAAETAIYSSGNNLADV 237
Score = 27.3 bits (59), Expect(2) = 5e-08
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 195 WDALHTPWCM 224
WD+L TPWCM
Sbjct: 240 WDSLQTPWCM 249
>ref|XP_003523563.1| PREDICTED: dehydration-responsive element-binding protein 2D-like
[Glycine max]
Length = 245
Score = 53.9 bits (128), Expect(2) = 1e-07
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Frame = +2
Query: 38 QNQQGIDDLWGNLNVNLPLFDDSIWAEAAMSIDFPAM-EDTGIFAS--NLMDV 187
+N+ W +N LP+FDDSIWAEAAMS+DFP + +T I+AS NL DV
Sbjct: 181 ENEVEFRPSWATMNEGLPVFDDSIWAEAAMSLDFPHIAAETAIYASGNNLADV 233
Score = 27.3 bits (59), Expect(2) = 1e-07
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 195 WDALHTPWCM 224
WD+L TPWCM
Sbjct: 236 WDSLQTPWCM 245
Database: NCBI-nr (updated 2014/02/11)
Posted date: Feb 11, 2014 4:56 AM
Number of letters in database: 12,374,887,350
Number of sequences in database: 35,149,712
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 35149712
Number of Hits to DB: 40,714,807,898,105
Number of extensions: -1744189894
Number of successful extensions: 1849090413
Number of sequences better than 1.0e-05: 4742637
Number of HSP's gapped: 1842428306
Number of HSP's successfully gapped: 5789409
Length of database: 12,374,887,350
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 17 ( 7.8 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)