BLASTX nr result

ID: Jatropha_contig00004770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00004770
         (489 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDJ24269.1| outer arm dynein binding protein [Echinococcus g...    95   8e-18
emb|CDJ15677.1| outer arm dynein binding protein [Hymenolepis mi...    84   1e-14
dbj|GAA49355.1| hypothetical protein CLF_102917 [Clonorchis sine...    63   3e-08

>emb|CDJ24269.1| outer arm dynein binding protein [Echinococcus granulosus]
          Length = 281

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 54/153 (35%), Positives = 83/153 (54%), Gaps = 5/153 (3%)
 Frame = +3

Query: 15  GVHKCETAIQNSC-NDCKINLSPDMDLTDFYLRAFPPKKQSKTNRRIYTKATKSE--SAD 185
           GVHKCE AI+N+C ND    L P+MDLTD+Y  AFPPK  S +      KAT  E  +AD
Sbjct: 126 GVHKCEQAIKNNCGNDVDPKLWPEMDLTDYYSYAFPPKNTSNSFTLDARKATVGEKDTAD 185

Query: 186 GAGS--WPVERPRDMQLQLMKQSFSDFSYLSNIFASETRRMKLFGRSRKDGFVGMGAAVD 359
              +  WP   P +   ++  + +S++ Y+  ++  E +R +            +   +D
Sbjct: 186 KKSTEKWPEMMPAETLRKVFGKKYSEYLYIHEMYRVEGKRAEFLKHMEMPHLDDLYVRID 245

Query: 360 RSKANRQSALNCAVYLDRHAELFHKLDPGLRNT 458
           R K NR+   +CA  L   A+L+HK+DP +++T
Sbjct: 246 RCKQNRKIVRDCANCLRAKADLWHKIDPSMKHT 278


>emb|CDJ15677.1| outer arm dynein binding protein [Hymenolepis microstoma]
          Length = 272

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
 Frame = +3

Query: 15  GVHKCETAIQNSCNDCKINLSPDMDLTDFYLRAFPPKKQSKTNRRIYTKATKSESADGAG 194
           G+HKCE AI N+C   +  L PDMDLTD+Y +AF P K SK+N   + K    +      
Sbjct: 129 GIHKCEEAIHNNCGGTEPKLMPDMDLTDYYSQAF-PLKDSKSNSSAWDKKRDQD------ 181

Query: 195 SWPVERPRDMQLQLMKQSFSDFSYLSNIFASETRR---MKLFGRSRKDGFVGMGAAVDRS 365
           +WP     ++  ++  + + +  Y+  I+ +E +R   +K  G ++ DGF      + R 
Sbjct: 182 TWPKMMSPEILRKIFGKRYWELPYIQEIYDAEGKREEYLKGAGAAQVDGFY---PRLKRC 238

Query: 366 KANRQSALNCAVYLDRHAELFHKLDPGLRNTKN 464
           +  RQ+  +CA +L   A+L +K+DP L++  +
Sbjct: 239 REIRQTVRDCANHLQSKADLSYKIDPTLKHASS 271


>dbj|GAA49355.1| hypothetical protein CLF_102917 [Clonorchis sinensis]
          Length = 367

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 KDGFVGMGAAVDRSKANRQSALNCAVYLDRHAELFHKLDPGLRNTK 461
           KDG   M A ++RSK NR++A+ C  YLDRHA+LFHKLDPG R+TK
Sbjct: 320 KDG-AEMNATLNRSKENRKTAVRCGTYLDRHADLFHKLDPGFRHTK 364


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