BLASTX nr result

ID: Jatropha_contig00004727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00004727
         (242 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519329.1| late embryogenesis abundant, putative [Ricin...    56   1e-06

>ref|XP_002519329.1| late embryogenesis abundant, putative [Ricinus communis]
           gi|223541644|gb|EEF43193.1| late embryogenesis abundant,
           putative [Ricinus communis]
          Length = 238

 Score = 56.2 bits (134), Expect(2) = 1e-06
 Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 11/57 (19%)
 Frame = +3

Query: 105 SCCCR*PKHMPSTSEKSEDSEAIK-----------DRAKDAKRTSESWTEWAKDKIS 242
           SC C    HMPSTSE+SED + +K           ++AK+A+  +E+WTEWAK+KIS
Sbjct: 27  SCNCSSVDHMPSTSEESEDFQKVKGKGEEAEEKAAEKAKEARENTETWTEWAKEKIS 83



 Score = 21.6 bits (44), Expect(2) = 1e-06
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 40  MIMASEKAYRVLLCLGFAMLLI 105
           MIMA ++  RVL+ LG  M ++
Sbjct: 2   MIMAFKRQSRVLVWLGIVMAVM 23


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