BLASTX nr result

ID: Jatropha_contig00004714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00004714
         (521 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319066.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-07
ref|XP_002328505.1| predicted protein [Populus trichocarpa] gi|5...    58   2e-07
ref|XP_002512225.1| Mitochondrial import inner membrane transloc...    60   4e-07
ref|XP_002285554.1| PREDICTED: mitochondrial import inner membra...    52   8e-06

>ref|XP_002319066.1| predicted protein [Populus trichocarpa] gi|222857442|gb|EEE94989.1|
           hypothetical protein POPTR_0013s03680g [Populus
           trichocarpa]
          Length = 180

 Score = 58.2 bits (139), Expect(2) = 2e-07
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -1

Query: 521 GL*SALIHYRDTDDLVNTVLSGLGTGAIYRSAKG 420
           G+ S LIH+RDTDDLVNTVL+GL TGAIYR+AKG
Sbjct: 116 GIESGLIHWRDTDDLVNTVLAGLSTGAIYRAAKG 149



 Score = 22.7 bits (47), Expect(2) = 2e-07
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -2

Query: 424 RGPRXXXXXXXXXXXXXXXXXXGKQVVKRYVPI 326
           +GPR                   KQ VKRYVPI
Sbjct: 148 KGPRSAAIAGAIGGIAAAGAVAAKQAVKRYVPI 180


>ref|XP_002328505.1| predicted protein [Populus trichocarpa] gi|550338147|gb|ERP60576.1|
           hypothetical protein POPTR_0005s05340g [Populus
           trichocarpa]
          Length = 180

 Score = 58.2 bits (139), Expect(2) = 2e-07
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -1

Query: 521 GL*SALIHYRDTDDLVNTVLSGLGTGAIYRSAKG 420
           G+ S LIH+RDTDDLVNTVL+GL TGAIYR+AKG
Sbjct: 116 GIESGLIHWRDTDDLVNTVLAGLSTGAIYRAAKG 149



 Score = 22.7 bits (47), Expect(2) = 2e-07
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -2

Query: 424 RGPRXXXXXXXXXXXXXXXXXXGKQVVKRYVPI 326
           +GPR                  GKQ VKRYVPI
Sbjct: 148 KGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI 180


>ref|XP_002512225.1| Mitochondrial import inner membrane translocase subunit tim23,
           putative [Ricinus communis] gi|223548186|gb|EEF49677.1|
           Mitochondrial import inner membrane translocase subunit
           tim23, putative [Ricinus communis]
          Length = 155

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = -1

Query: 521 GL*SALIHYRDTDDLVNTVLSGLGTGAIYRSAKGSQIS 408
           G+ S LIHYRD DDL+NT L+GLGTGAIYR+A+G ++S
Sbjct: 117 GIESVLIHYRDADDLINTALAGLGTGAIYRAARGPRLS 154


>ref|XP_002285554.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim23 [Vitis vinifera] gi|296082145|emb|CBI21150.3|
           unnamed protein product [Vitis vinifera]
          Length = 182

 Score = 52.4 bits (124), Expect(2) = 8e-06
 Identities = 22/34 (64%), Positives = 30/34 (88%)
 Frame = -1

Query: 521 GL*SALIHYRDTDDLVNTVLSGLGTGAIYRSAKG 420
           GL S +IH+RDTDD++N+V +GLGTGA+YR+A G
Sbjct: 118 GLESGMIHWRDTDDMLNSVFAGLGTGALYRAAAG 151



 Score = 22.7 bits (47), Expect(2) = 8e-06
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -2

Query: 355 KQVVKRYVPI 326
           KQV+KRYVPI
Sbjct: 173 KQVMKRYVPI 182


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