BLASTX nr result

ID: Jatropha_contig00004069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00004069
         (405 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517129.1| Late embryogenesis abundant protein D-34, pu...    41   7e-07
ref|NP_188888.1| Seed maturation protein [Arabidopsis thaliana] ...    40   8e-06
sp|P09444.1|LEA34_GOSHI RecName: Full=Late embryogenesis abundan...    38   1e-05

>ref|XP_002517129.1| Late embryogenesis abundant protein D-34, putative [Ricinus
           communis] gi|223543764|gb|EEF45292.1| Late embryogenesis
           abundant protein D-34, putative [Ricinus communis]
          Length = 264

 Score = 41.2 bits (95), Expect(2) = 7e-07
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = -2

Query: 386 ADKVVTRADAKXEASAELRNNPNLT 312
           ADKVVTRADA+   SAE+RNNPNL+
Sbjct: 218 ADKVVTRADAEGVVSAEIRNNPNLS 242



 Score = 37.4 bits (85), Expect(2) = 7e-07
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = -1

Query: 336 VEEQSEFNTHPGGVAVSMTTAARLNETIN 250
           +      +THPGGVA SM  AARLNE  N
Sbjct: 235 IRNNPNLSTHPGGVAASMAAAARLNENTN 263


>ref|NP_188888.1| Seed maturation protein [Arabidopsis thaliana]
           gi|11994281|dbj|BAB01464.1| seed maturation protein, LEA
           protein in group 5-like [Arabidopsis thaliana]
           gi|27754552|gb|AAO22723.1| putative LEA protein
           [Arabidopsis thaliana] gi|28394023|gb|AAO42419.1|
           putative LEA protein [Arabidopsis thaliana]
           gi|332643125|gb|AEE76646.1| Seed maturation protein
           [Arabidopsis thaliana]
          Length = 262

 Score = 40.0 bits (92), Expect(2) = 8e-06
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = -2

Query: 389 AADKVVTRADAKXEASAELRNNPNLT 312
           AADK VTR DA+   SAELRNNPNL+
Sbjct: 215 AADKAVTRQDAEGVVSAELRNNPNLS 240



 Score = 35.0 bits (79), Expect(2) = 8e-06
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -1

Query: 315 NTHPGGVAVSMTTAARLNE 259
           +THPGGVA S+T AARLNE
Sbjct: 240 STHPGGVAASITAAARLNE 258


>sp|P09444.1|LEA34_GOSHI RecName: Full=Late embryogenesis abundant protein D-34; Short=LEA
           D-34 gi|18501|emb|CAA31594.1| D-34 Lea protein
           [Gossypium hirsutum] gi|167385|gb|AAA33075.1| storage
           protein [Gossypium hirsutum] gi|226556|prf||1601521F Lea
           D-34 gene
          Length = 264

 Score = 37.7 bits (86), Expect(2) = 1e-05
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -1

Query: 312 THPGGVAVSMTTAARLNETIN 250
           THPGGVA SM  AARLNE +N
Sbjct: 243 THPGGVAASMAAAARLNENVN 263



 Score = 37.0 bits (84), Expect(2) = 1e-05
 Identities = 17/24 (70%), Positives = 19/24 (79%)
 Frame = -2

Query: 386 ADKVVTRADAKXEASAELRNNPNL 315
           ADK VTR DA+   SAELRNNPN+
Sbjct: 218 ADKAVTRQDAEGVVSAELRNNPNV 241


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