BLASTX nr result
ID: Jatropha_contig00003988
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00003988
(414 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531056.1| conserved hypothetical protein [Ricinus comm... 153 2e-35
gb|EMJ15931.1| hypothetical protein PRUPE_ppa025436mg [Prunus pe... 143 2e-32
gb|EOX96931.1| Mediator of RNA polymerase II transcription subun... 141 7e-32
gb|EOX96929.1| Mediator of RNA polymerase II transcription subun... 141 7e-32
gb|EOX96930.1| Mediator of RNA polymerase II transcription subun... 137 1e-30
ref|XP_004294032.1| PREDICTED: mediator of RNA polymerase II tra... 137 2e-30
ref|XP_002280511.1| PREDICTED: uncharacterized protein LOC100244... 136 3e-30
gb|EOX93676.1| Mediator of RNA polymerase II transcription subun... 135 4e-30
ref|XP_004504540.1| PREDICTED: probable mediator of RNA polymera... 131 8e-29
ref|XP_003532709.1| PREDICTED: uncharacterized protein LOC100805... 130 2e-28
gb|ERP62516.1| hypothetical protein POPTR_0004s20480g [Populus t... 130 2e-28
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu... 129 3e-28
ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814... 129 4e-28
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra... 129 5e-28
ref|XP_006344343.1| PREDICTED: mediator of RNA polymerase II tra... 126 2e-27
ref|XP_006344342.1| PREDICTED: mediator of RNA polymerase II tra... 126 2e-27
ref|XP_006344340.1| PREDICTED: mediator of RNA polymerase II tra... 126 2e-27
emb|CAN83525.1| hypothetical protein VITISV_030230 [Vitis vinifera] 125 4e-27
gb|ESW30725.1| hypothetical protein PHAVU_002G177400g [Phaseolus... 125 5e-27
ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818... 125 7e-27
>ref|XP_002531056.1| conserved hypothetical protein [Ricinus communis]
gi|223529351|gb|EEF31317.1| conserved hypothetical
protein [Ricinus communis]
Length = 292
Score = 153 bits (386), Expect = 2e-35
Identities = 79/117 (67%), Positives = 87/117 (74%)
Frame = +1
Query: 64 PPTYEDLPVTSFLVSLAPYSLVKLMDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCK 243
P ED P FLV KLM EGK FG G +EL GAVDLV+Q+KLWPHHEFFCK
Sbjct: 112 PVIDEDKPALDFLV--------KLMGFEGKKFGGGLKELCGAVDLVNQFKLWPHHEFFCK 163
Query: 244 RSLPLSISETRYLQNVVGDTEIRKGEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
RSLPLS+S+T Y+QNVVGDTEIRKGEGMELDQLFHNTP +R+ H I FDLGVL
Sbjct: 164 RSLPLSVSQTHYIQNVVGDTEIRKGEGMELDQLFHNTPYMRQGKAH--IHTFDLGVL 218
>gb|EMJ15931.1| hypothetical protein PRUPE_ppa025436mg [Prunus persica]
Length = 197
Score = 143 bits (361), Expect = 2e-32
Identities = 71/93 (76%), Positives = 75/93 (80%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MDLE K FGRG RELGGA DL++ YKLWPHHEFFCKRSLPLSISET YL NVVGDT IRK
Sbjct: 1 MDLEAKRFGRGPRELGGATDLINLYKLWPHHEFFCKRSLPLSISETHYLHNVVGDTLIRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
GEGMELDQLF +RE+N H I PFDL VL
Sbjct: 61 GEGMELDQLFQGNLYMREKNAH--IHPFDLDVL 91
>gb|EOX96931.1| Mediator of RNA polymerase II transcription subunit 19 isoform 3
[Theobroma cacao]
Length = 245
Score = 141 bits (356), Expect = 7e-32
Identities = 81/139 (58%), Positives = 93/139 (66%), Gaps = 4/139 (2%)
Frame = +1
Query: 10 NDNTSNLSTLSATITRLFPPTYEDLPVTSFLVSLAPYSLVKL----MDLEGKTFGRGQRE 177
ND+ NL T + L PP SFLV LVK MDLE FGRG +E
Sbjct: 15 NDSPGNLRTTRSA--NLHPPV-SSCGFFSFLVVDEEELLVKFVIDSMDLESNRFGRGPKE 71
Query: 178 LGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRKGEGMELDQLFHNTP 357
LGGAVDL+ ++KLWPHHEFFCKR LPLSISET Y++NVVGDTEIRKG+GMELDQLF N
Sbjct: 72 LGGAVDLIKKFKLWPHHEFFCKRPLPLSISETTYIRNVVGDTEIRKGKGMELDQLFPNAS 131
Query: 358 NLRERNVHARILPFDLGVL 414
+ R RN+ I PFDL +L
Sbjct: 132 DSRGRNL--SIGPFDLDLL 148
>gb|EOX96929.1| Mediator of RNA polymerase II transcription subunit 19 isoform 1
[Theobroma cacao]
Length = 309
Score = 141 bits (356), Expect = 7e-32
Identities = 81/139 (58%), Positives = 93/139 (66%), Gaps = 4/139 (2%)
Frame = +1
Query: 10 NDNTSNLSTLSATITRLFPPTYEDLPVTSFLVSLAPYSLVKL----MDLEGKTFGRGQRE 177
ND+ NL T + L PP SFLV LVK MDLE FGRG +E
Sbjct: 15 NDSPGNLRTTRSA--NLHPPV-SSCGFFSFLVVDEEELLVKFVIDSMDLESNRFGRGPKE 71
Query: 178 LGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRKGEGMELDQLFHNTP 357
LGGAVDL+ ++KLWPHHEFFCKR LPLSISET Y++NVVGDTEIRKG+GMELDQLF N
Sbjct: 72 LGGAVDLIKKFKLWPHHEFFCKRPLPLSISETTYIRNVVGDTEIRKGKGMELDQLFPNAS 131
Query: 358 NLRERNVHARILPFDLGVL 414
+ R RN+ I PFDL +L
Sbjct: 132 DSRGRNL--SIGPFDLDLL 148
>gb|EOX96930.1| Mediator of RNA polymerase II transcription subunit 19 isoform 2,
partial [Theobroma cacao]
Length = 252
Score = 137 bits (345), Expect = 1e-30
Identities = 73/111 (65%), Positives = 83/111 (74%), Gaps = 4/111 (3%)
Frame = +1
Query: 94 SFLVSLAPYSLVKL----MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLS 261
SFLV LVK MDLE FGRG +ELGGAVDL+ ++KLWPHHEFFCKR LPLS
Sbjct: 22 SFLVVDEEELLVKFVIDSMDLESNRFGRGPKELGGAVDLIKKFKLWPHHEFFCKRPLPLS 81
Query: 262 ISETRYLQNVVGDTEIRKGEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
ISET Y++NVVGDTEIRKG+GMELDQLF N + R RN+ I PFDL +L
Sbjct: 82 ISETTYIRNVVGDTEIRKGKGMELDQLFPNASDSRGRNL--SIGPFDLDLL 130
>ref|XP_004294032.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like [Fragaria vesca subsp. vesca]
Length = 204
Score = 137 bits (344), Expect = 2e-30
Identities = 69/93 (74%), Positives = 74/93 (79%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MDL+ K FGRG RELGGA DLV QYKLWP+HEFFCKRSLPL SET YL NVVGDT+IRK
Sbjct: 5 MDLDAKGFGRGPRELGGATDLVKQYKLWPYHEFFCKRSLPL--SETHYLHNVVGDTQIRK 62
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
GEGMELDQL TP +RERN A I P D G+L
Sbjct: 63 GEGMELDQLLEKTPYMRERN--ANIHPIDFGML 93
>ref|XP_002280511.1| PREDICTED: uncharacterized protein LOC100244629 [Vitis vinifera]
gi|297740784|emb|CBI30966.3| unnamed protein product
[Vitis vinifera]
Length = 210
Score = 136 bits (342), Expect = 3e-30
Identities = 69/93 (74%), Positives = 77/93 (82%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MD + K FG+G REL GAVDL++ YKL PHHEFFCKRSLPLSISET YL++VVG TEIRK
Sbjct: 1 MDADYKKFGKGPRELSGAVDLINHYKLLPHHEFFCKRSLPLSISETHYLRSVVGGTEIRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
GEGMELDQLFH+T LRERN A I PFDL +L
Sbjct: 61 GEGMELDQLFHSTFYLRERN--AGIHPFDLDIL 91
>gb|EOX93676.1| Mediator of RNA polymerase II transcription subunit 19 [Theobroma
cacao]
Length = 221
Score = 135 bits (341), Expect = 4e-30
Identities = 67/93 (72%), Positives = 75/93 (80%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MD EGK FG+G REL GAVDL+S YKL PHH+FFCKR LPLSIS+T YL NVVGDTEIRK
Sbjct: 1 MDPEGKKFGKGPRELSGAVDLISHYKLLPHHDFFCKRPLPLSISDTHYLHNVVGDTEIRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
GEGM+LDQL NT + R+ N ARI PFDL +L
Sbjct: 61 GEGMQLDQLIQNTSHNRDTN--ARIQPFDLDIL 91
>ref|XP_004504540.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 19b-like isoform X1 [Cicer arietinum]
Length = 192
Score = 131 bits (330), Expect = 8e-29
Identities = 66/93 (70%), Positives = 74/93 (79%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MDLEG FGRG RELGGA DLVSQYKLWP +EFFCK+SLPLSISET YL+NVVGDT+I+K
Sbjct: 1 MDLEGNRFGRGNRELGGAHDLVSQYKLWPFYEFFCKKSLPLSISETHYLRNVVGDTKIKK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
GEGMELDQL NT ++ + PFDL VL
Sbjct: 61 GEGMELDQLCKNTYTSEKKPC---LFPFDLNVL 90
>ref|XP_003532709.1| PREDICTED: uncharacterized protein LOC100805870 [Glycine max]
Length = 207
Score = 130 bits (327), Expect = 2e-28
Identities = 63/93 (67%), Positives = 75/93 (80%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MDLEGK FGRG +ELGG DL++QY+LWP++EFFCK+SLP+SISET YL NVVGDT+IRK
Sbjct: 1 MDLEGKKFGRGNKELGGTRDLINQYRLWPYYEFFCKKSLPVSISETHYLHNVVGDTKIRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
GEGMELDQL NT ++ A + PFDL VL
Sbjct: 61 GEGMELDQLCKNTDTSEKK---ACLCPFDLDVL 90
>gb|ERP62516.1| hypothetical protein POPTR_0004s20480g [Populus trichocarpa]
gi|550341488|gb|ERP62517.1| hypothetical protein
POPTR_0004s20480g [Populus trichocarpa]
Length = 221
Score = 130 bits (326), Expect = 2e-28
Identities = 66/93 (70%), Positives = 73/93 (78%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MD E K FGRG REL GAVDL+S +KL PHHEFFCKRSLPLSI++T YL NVVGDTEIRK
Sbjct: 1 MDPESKKFGRGPRELTGAVDLISHFKLLPHHEFFCKRSLPLSIADTHYLHNVVGDTEIRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
GEGM+LDQL NT R+ +A I PFDL VL
Sbjct: 61 GEGMQLDQLIQNT----SRDSNAHIEPFDLDVL 89
>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
gi|223527846|gb|EEF29942.1| RNA binding protein,
putative [Ricinus communis]
Length = 221
Score = 129 bits (325), Expect = 3e-28
Identities = 66/93 (70%), Positives = 73/93 (78%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MD E K FG G REL GAVDL+S +KL PHHEFFCKRSLPLSIS+T YL NVVGD+EIRK
Sbjct: 1 MDPESKKFGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
G+GM+LDQL NT R+ N ARI PFDL VL
Sbjct: 61 GDGMQLDQLIQNTSYSRDSN--ARIQPFDLDVL 91
>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
Length = 223
Score = 129 bits (324), Expect = 4e-28
Identities = 64/93 (68%), Positives = 75/93 (80%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MD EGK FG G REL GAVDL+S +KL PH+EFFCKRSLP+SI++T YL NVVGDTEIRK
Sbjct: 1 MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
G+GM+L+QL NT + R+ N ARI PFDL VL
Sbjct: 61 GDGMQLEQLIQNTSSFRDTN--ARIQPFDLDVL 91
>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like [Cucumis sativus]
gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 19a-like
[Cucumis sativus]
Length = 219
Score = 129 bits (323), Expect = 5e-28
Identities = 65/93 (69%), Positives = 73/93 (78%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
M+ E K FGRG REL GAVDL+S YKL PHH+FFCK+SLPLSIS+T YL NVVGDTEIRK
Sbjct: 1 MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
GEGM+L+QL NT RE N ARI PFD +L
Sbjct: 61 GEGMQLNQLIQNTSYPRETN--ARIQPFDQDIL 91
>ref|XP_006344343.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X4 [Solanum tuberosum]
Length = 218
Score = 126 bits (317), Expect = 2e-27
Identities = 65/93 (69%), Positives = 73/93 (78%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MD + K FGRG REL GAVDL+S +KL PH EFFCKRSLPLSIS+T YL NVVGDTEIRK
Sbjct: 1 MDPDNKRFGRGPRELTGAVDLISHFKLLPHQEFFCKRSLPLSISDTHYLHNVVGDTEIRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
GEGM+LDQL +T RE + +RI PFDL VL
Sbjct: 61 GEGMQLDQLIQDTSLSRETS--SRIQPFDLDVL 91
>ref|XP_006344342.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X3 [Solanum tuberosum]
Length = 219
Score = 126 bits (317), Expect = 2e-27
Identities = 65/93 (69%), Positives = 73/93 (78%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MD + K FGRG REL GAVDL+S +KL PH EFFCKRSLPLSIS+T YL NVVGDTEIRK
Sbjct: 1 MDPDNKRFGRGPRELTGAVDLISHFKLLPHQEFFCKRSLPLSISDTHYLHNVVGDTEIRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
GEGM+LDQL +T RE + +RI PFDL VL
Sbjct: 61 GEGMQLDQLIQDTSLSRETS--SRIQPFDLDVL 91
>ref|XP_006344340.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X1 [Solanum tuberosum]
gi|565354889|ref|XP_006344341.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 19a-like isoform
X2 [Solanum tuberosum]
Length = 220
Score = 126 bits (317), Expect = 2e-27
Identities = 65/93 (69%), Positives = 73/93 (78%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MD + K FGRG REL GAVDL+S +KL PH EFFCKRSLPLSIS+T YL NVVGDTEIRK
Sbjct: 1 MDPDNKRFGRGPRELTGAVDLISHFKLLPHQEFFCKRSLPLSISDTHYLHNVVGDTEIRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
GEGM+LDQL +T RE + +RI PFDL VL
Sbjct: 61 GEGMQLDQLIQDTSLSRETS--SRIQPFDLDVL 91
>emb|CAN83525.1| hypothetical protein VITISV_030230 [Vitis vinifera]
Length = 316
Score = 125 bits (315), Expect = 4e-27
Identities = 64/83 (77%), Positives = 70/83 (84%)
Frame = +1
Query: 166 GQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRKGEGMELDQLF 345
G REL GAVDL++ YKL PHHEFFCKRSLPLSISET YL++VVG TEIRKGEGMELDQLF
Sbjct: 49 GPRELSGAVDLINHYKLLPHHEFFCKRSLPLSISETHYLRSVVGXTEIRKGEGMELDQLF 108
Query: 346 HNTPNLRERNVHARILPFDLGVL 414
H+T LRERN A I PFDL +L
Sbjct: 109 HSTFYLRERN--AGIHPFDLDIL 129
>gb|ESW30725.1| hypothetical protein PHAVU_002G177400g [Phaseolus vulgaris]
Length = 200
Score = 125 bits (314), Expect = 5e-27
Identities = 61/93 (65%), Positives = 75/93 (80%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MDLE K+FGRG RELGG DL++QY+LWP++EFFCK+ LP+SISET YL+NVVGDT++RK
Sbjct: 1 MDLEDKSFGRGNRELGGTRDLINQYRLWPYYEFFCKKPLPVSISETHYLRNVVGDTKVRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
GEGMELDQL N P E+ A + PFDL +L
Sbjct: 61 GEGMELDQLCQN-PEPSEKK--ASLCPFDLDLL 90
>ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818495 [Glycine max]
Length = 222
Score = 125 bits (313), Expect = 7e-27
Identities = 63/93 (67%), Positives = 73/93 (78%)
Frame = +1
Query: 136 MDLEGKTFGRGQRELGGAVDLVSQYKLWPHHEFFCKRSLPLSISETRYLQNVVGDTEIRK 315
MD EGK FG G REL GAVDL+S +KL PH+EFFCKR LP+SI++T YL NVVGDTEIRK
Sbjct: 1 MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSIADTHYLHNVVGDTEIRK 60
Query: 316 GEGMELDQLFHNTPNLRERNVHARILPFDLGVL 414
G+GM+LDQL NT R+ +ARI PFDL VL
Sbjct: 61 GDGMQLDQLIQNT---SFRDTNARIQPFDLDVL 90