BLASTX nr result

ID: Jatropha_contig00003886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00003886
         (599 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522854.1| sweet protein mabinlin-1 chain A [Ricinus co...    49   2e-11
prf||1707274A 2S albumin                                               49   2e-11
ref|XP_002522852.1| 2S albumin precursor, putative [Ricinus comm...    48   2e-10
ref|XP_002522851.1| 2S albumin precursor, putative [Ricinus comm...    47   2e-09
pdb|1PSY|A Chain A, Structure Of Ricc3, Nmr, 20 Structures             46   3e-07
ref|XP_002317576.1| predicted protein [Populus trichocarpa] gi|2...    42   5e-06
ref|XP_002522847.1| 2S albumin precursor, putative [Ricinus comm...    41   7e-06

>ref|XP_002522854.1| sweet protein mabinlin-1 chain A [Ricinus communis]
           gi|255563707|ref|XP_002522855.1| sweet protein
           mabinlin-1, chain B [Ricinus communis]
           gi|112762|sp|P01089.2|2SS_RICCO RecName: Full=2S
           albumin; AltName: Allergen=Ric c 1/3; Contains: RecName:
           Full=Allergen Ric c 3 small chain; AltName: Full=4.7 kDa
           napin-like protein small chain; AltName: Full=CB-1A
           small chain; AltName: Full=RS1A; Contains: RecName:
           Full=Allergen Ric c 3 large chain; AltName: Full=CB-1A
           large chain; AltName: Full=RL1; Contains: RecName:
           Full=Allergen Ric c 1 small chain; AltName: Full=2S
           albumin small chain; AltName: Full=4 kDa napin-like
           protein small chain; AltName: Full=RS2B; Contains:
           RecName: Full=Allergen Ric c 1 large chain; AltName:
           Full=2S albumin large chain; AltName: Full=7.3 kDa
           napin-like protein large chain; AltName: Full=RL2;
           Flags: Precursor gi|21068|emb|CAA38097.1| 2S albumin
           precursor [Ricinus communis] gi|223537938|gb|EEF39552.1|
           sweet protein mabinlin-1 chain A [Ricinus communis]
           gi|223537939|gb|EEF39553.1| sweet protein mabinlin-1,
           chain B [Ricinus communis]
          Length = 258

 Score = 48.9 bits (115), Expect(2) = 2e-11
 Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
 Frame = +1

Query: 10  MAKLAISTSLICVRLAIIANAVSGYLTATAITVEMEDAYRVQG-----ICKKEAEKKDLS 174
           MAKL  + +L+ V L IIANA   Y T T  T+E++++   +       C++E ++KDLS
Sbjct: 1   MAKLIPTIALVSVLLFIIANASFAYRT-TITTIEIDESKGEREGSSSQQCRQEVQRKDLS 59

Query: 175 SCENYVRLSRTR 210
           SCE Y+R S +R
Sbjct: 60  SCERYLRQSSSR 71



 Score = 45.8 bits (107), Expect(2) = 2e-11
 Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
 Frame = +2

Query: 224 QLLRRIGNRQQQVPGQ----CCNQAWKLSGFCRCQSIRYLPE---KQGYVGSQEYDEAMR 382
           ++LR  G+  QQ   Q    CCNQ  ++   C+C++I+Y+ E   +QG +  +E +   +
Sbjct: 77  EVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQ 136

Query: 383 RADDIISVC 409
           RA +I+S C
Sbjct: 137 RAGEIVSSC 145


>prf||1707274A 2S albumin
          Length = 258

 Score = 48.5 bits (114), Expect(2) = 2e-11
 Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
 Frame = +1

Query: 10  MAKLAISTSLICVRLAIIANAVSGYLTATAITVEMEDAYRVQG-----ICKKEAEKKDLS 174
           MAKL  + +L+ V L IIANA   Y T T  T+E++++   +       C++E ++KDLS
Sbjct: 1   MAKLIPTIALVSVFLFIIANASFAYRT-TITTIEIDESKGEREGSSSQQCRQEVQRKDLS 59

Query: 175 SCENYVRLSRTR 210
           SCE Y+R S +R
Sbjct: 60  SCERYLRQSSSR 71



 Score = 45.8 bits (107), Expect(2) = 2e-11
 Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
 Frame = +2

Query: 224 QLLRRIGNRQQQVPGQ----CCNQAWKLSGFCRCQSIRYLPE---KQGYVGSQEYDEAMR 382
           ++LR  G+  QQ   Q    CCNQ  ++   C+C++I+Y+ E   +QG +  +E +   +
Sbjct: 77  EVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQ 136

Query: 383 RADDIISVC 409
           RA +I+S C
Sbjct: 137 RAGEIVSSC 145


>ref|XP_002522852.1| 2S albumin precursor, putative [Ricinus communis]
           gi|223537936|gb|EEF39550.1| 2S albumin precursor,
           putative [Ricinus communis]
          Length = 258

 Score = 47.8 bits (112), Expect(2) = 2e-10
 Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
 Frame = +1

Query: 10  MAKLAISTSLICVRLAIIANAVSGYLTATAITVEMEDAY------RVQGICKKEAEKKDL 171
           MAKL  + +LI V L IIANA   Y T    T+E++D        R Q  C +E ++KDL
Sbjct: 1   MAKLIPTVTLISVLLVIIANASFAYGT----TIEIDDTKAGGEGSRSQQ-CHQEFQRKDL 55

Query: 172 SSCENYVRLSRTR 210
           SSCE Y+R S +R
Sbjct: 56  SSCEQYIRQSSSR 68



 Score = 43.5 bits (101), Expect(2) = 2e-10
 Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
 Frame = +2

Query: 224 QLLR--RIGNRQQQVPG--QCCNQAWKLSGFCRCQSIRYLPE---KQGYVGSQEYDEAMR 382
           +LLR  R  ++QQ+     QCCNQ  +L   C+C++I+ + E   +QG++  +E +   +
Sbjct: 74  ELLRMPRAEDQQQETQQLQQCCNQVEQLRHDCQCEAIKSIAEYQIQQGHLQGEESERVGQ 133

Query: 383 RADDIISVC 409
           RA DI+S C
Sbjct: 134 RASDIVSSC 142


>ref|XP_002522851.1| 2S albumin precursor, putative [Ricinus communis]
           gi|223537935|gb|EEF39549.1| 2S albumin precursor,
           putative [Ricinus communis]
          Length = 179

 Score = 46.6 bits (109), Expect(2) = 2e-09
 Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
 Frame = +1

Query: 10  MAKLAISTSLICVRLAIIANAVSGYLTATAITVEMEDAYRVQG-----ICKKEAEKKDLS 174
           MAKL  + +L  V L IIA+A   + T T  T+E++D+   +       C++E ++KDLS
Sbjct: 1   MAKLVSTIALFSVLLFIIADASFAHRT-TITTIEIDDSKGEREGSHPQQCRQEIQRKDLS 59

Query: 175 SCENYVRLSRTR 210
           SCE Y+R S +R
Sbjct: 60  SCEQYIRQSSSR 71



 Score = 41.2 bits (95), Expect(2) = 2e-09
 Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
 Frame = +2

Query: 245 NRQQQVPG--QCCNQAWKLSGFCRCQSIRYLPE---KQGYVGSQEYDEAMRRADDIISVC 409
           N+QQ+     QCCNQ  ++   C+C++I+ + E   +QG++  +E +   +RA +I+S C
Sbjct: 86  NQQQETRQLQQCCNQVEQVRNDCQCEAIKSIAEDQIRQGHLQREESETVGQRASEIVSSC 145


>pdb|1PSY|A Chain A, Structure Of Ricc3, Nmr, 20 Structures
          Length = 125

 Score = 45.8 bits (107), Expect(2) = 3e-07
 Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
 Frame = +2

Query: 224 QLLRRIGNRQQQVPGQ----CCNQAWKLSGFCRCQSIRYLPE---KQGYVGSQEYDEAMR 382
           ++LR  G+  QQ   Q    CCNQ  ++   C+C++I+Y+ E   +QG +  +E +   +
Sbjct: 46  EVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQ 105

Query: 383 RADDIISVC 409
           RA +I+S C
Sbjct: 106 RAGEIVSSC 114



 Score = 34.7 bits (78), Expect(2) = 3e-07
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = +1

Query: 142 CKKEAEKKDLSSCENYVRLSRTR 210
           C++E ++KDLSSCE Y+R S +R
Sbjct: 18  CRQEVQRKDLSSCERYLRQSSSR 40


>ref|XP_002317576.1| predicted protein [Populus trichocarpa] gi|222860641|gb|EEE98188.1|
           hypothetical protein POPTR_0011s13790g [Populus
           trichocarpa] gi|550307011|gb|ERP46326.1| hypothetical
           protein POPTR_1066s00200g [Populus trichocarpa]
           gi|550307012|gb|ERP46327.1| hypothetical protein
           POPTR_1066s00210g [Populus trichocarpa]
          Length = 148

 Score = 41.6 bits (96), Expect(2) = 5e-06
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +1

Query: 10  MAKLAISTSLICVRLAIIANAVSGYLTATAITVEMEDAYRVQGICKKEAEKKDLSSCENY 189
           MA+      L  + LA+IANA S   T T +  + + +    G C+++  + DLSSCE Y
Sbjct: 1   MARFLTIAVLASLLLALIANASSYRTTITTVEFDDQSSRSRSGGCQEKIRRVDLSSCEQY 60

Query: 190 V-RLSRTR 210
           V ++SR R
Sbjct: 61  VSQISRPR 68



 Score = 34.7 bits (78), Expect(2) = 5e-06
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
 Frame = +2

Query: 221 RQLLRRIGNRQ--QQVPGQCCNQAWKLSGFCRCQSIRYLPEKQGY----VGSQEYDEAMR 382
           R  LR I +RQ  Q+   QCC Q   +   C+C ++R + E+Q         +E  E  R
Sbjct: 68  RLALRGIHHRQGDQEQVQQCCQQIRNVDRQCQCDALRSVIEEQTQHQRRPEQEERQEVQR 127

Query: 383 RADDIISVC 409
           RA +I S C
Sbjct: 128 RAAEIQSQC 136


>ref|XP_002522847.1| 2S albumin precursor, putative [Ricinus communis]
           gi|223537931|gb|EEF39545.1| 2S albumin precursor,
           putative [Ricinus communis]
          Length = 152

 Score = 40.8 bits (94), Expect(2) = 7e-06
 Identities = 27/67 (40%), Positives = 38/67 (56%)
 Frame = +1

Query: 10  MAKLAISTSLICVRLAIIANAVSGYLTATAITVEMEDAYRVQGICKKEAEKKDLSSCENY 189
           MAKL  + +LI V L IIANA   Y T T  TVE++D    Q  C ++   K+  +C+ Y
Sbjct: 1   MAKLIPAVALISVLLFIIANASFAYRT-TITTVEVDDT-NTQERCFRDLRGKEFRACQMY 58

Query: 190 VRLSRTR 210
           +  S +R
Sbjct: 59  LSQSSSR 65



 Score = 35.0 bits (79), Expect(2) = 7e-06
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
 Frame = +2

Query: 224 QLLRRIGNRQQQVPGQ---CCNQAWKLSGFCRCQSIRYLPEKQ----GYVGSQEYDEAMR 382
           ++L   G + QQ   Q   CCN+  ++   C+C++++   EKQ      +  ++Y E M+
Sbjct: 71  EVLEMPGEKDQQERHQLQECCNELKQVRDECQCEALQVAVEKQIESEQQMQREQYQEVMQ 130

Query: 383 RADDIISVC 409
           +A  I S C
Sbjct: 131 KARSIPSSC 139


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