BLASTX nr result
ID: Jatropha_contig00003785
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00003785
(392 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao... 81 2e-13
ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854... 81 2e-13
ref|XP_002305685.1| PAF1 complex component [Populus trichocarpa]... 81 2e-13
gb|ESR36142.1| hypothetical protein CICLE_v10028000mg [Citrus cl... 79 4e-13
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe... 79 6e-13
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein... 79 8e-13
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein... 79 8e-13
ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein... 75 8e-12
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein... 75 8e-12
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein... 75 8e-12
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 75 8e-12
gb|ESW35307.1| hypothetical protein PHAVU_001G224300g [Phaseolus... 74 1e-11
gb|ERN15034.1| hypothetical protein AMTR_s00032p00242160 [Ambore... 74 1e-11
gb|EEE97240.2| plus-3 domain-containing family protein [Populus ... 74 2e-11
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein... 74 2e-11
ref|XP_002316628.1| PAF1 complex component [Populus trichocarpa] 74 2e-11
gb|ESQ29352.1| hypothetical protein EUTSA_v10023338mg [Eutrema s... 74 2e-11
ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Caps... 74 2e-11
gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryz... 74 2e-11
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th... 74 2e-11
>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
gi|508781058|gb|EOY28314.1| PAF1 complex component
isoform 1 [Theobroma cacao]
Length = 660
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IEATVGC+VPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 621 FMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 660
>ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854406 [Vitis vinifera]
Length = 493
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IEATVGCRVPENDGRRHALTLTV DYKRRRGLL
Sbjct: 454 FMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 493
>ref|XP_002305685.1| PAF1 complex component [Populus trichocarpa]
gi|222848649|gb|EEE86196.1| plus-3 domain-containing
family protein [Populus trichocarpa]
Length = 662
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IEATVGCRVPENDGRRHALTLTV DYKRRRGLL
Sbjct: 623 FMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 662
>gb|ESR36142.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
Length = 643
Score = 79.3 bits (194), Expect = 4e-13
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IEATVGC+VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 604 FMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
Length = 646
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
F+ARKQ+IEATVGCRVPENDGRRHALTLTVSDYKRR GLL
Sbjct: 607 FLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646
>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
tuberosum]
Length = 652
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IEATVGC VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 613 FMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 652
>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
[Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform 2 [Solanum lycopersicum]
Length = 645
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IEATVGC VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 606 FMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 645
>ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 619
Score = 75.1 bits (183), Expect = 8e-12
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IEATVG RVPE+DGRRHALTL+VSDYKRRRGLL
Sbjct: 580 FMARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRGLL 619
>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 657
Score = 75.1 bits (183), Expect = 8e-12
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IEATVG RVPE+DGRRHALTL+VSDYKRRRGLL
Sbjct: 618 FMARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRGLL 657
>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
polymerase-associated protein RTF1 homolog [Cucumis
sativus]
Length = 660
Score = 75.1 bits (183), Expect = 8e-12
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
F+ARKQ+IEATVG +VPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 621 FLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 75.1 bits (183), Expect = 8e-12
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IEATVG RV ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 617 FMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656
>gb|ESW35307.1| hypothetical protein PHAVU_001G224300g [Phaseolus vulgaris]
Length = 657
Score = 74.3 bits (181), Expect = 1e-11
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
F++RKQ+IEATVGCRV ENDG RHALTLT+SDYKRRRGLL
Sbjct: 618 FLSRKQKIEATVGCRVSENDGSRHALTLTISDYKRRRGLL 657
>gb|ERN15034.1| hypothetical protein AMTR_s00032p00242160 [Amborella trichopoda]
Length = 624
Score = 74.3 bits (181), Expect = 1e-11
Identities = 34/40 (85%), Positives = 39/40 (97%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IEAT+G RVPENDGRRH+LTL+VSDYKRRRGL+
Sbjct: 585 FMARKQRIEATIGVRVPENDGRRHSLTLSVSDYKRRRGLV 624
>gb|EEE97240.2| plus-3 domain-containing family protein [Populus trichocarpa]
Length = 664
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IEA VGC+V ENDGRRHALTLTV DYKRRRGLL
Sbjct: 625 FMARKQRIEANVGCQVRENDGRRHALTLTVGDYKRRRGLL 664
>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IE+TVG RV ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 617 FMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 656
>ref|XP_002316628.1| PAF1 complex component [Populus trichocarpa]
Length = 664
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ+IEA VGC+V ENDGRRHALTLTV DYKRRRGLL
Sbjct: 625 FMARKQRIEANVGCQVRENDGRRHALTLTVGDYKRRRGLL 664
>gb|ESQ29352.1| hypothetical protein EUTSA_v10023338mg [Eutrema salsugineum]
Length = 644
Score = 73.6 bits (179), Expect = 2e-11
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ EATVGCRV ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 605 FMARKQVTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 644
>ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Capsella rubella]
gi|482569554|gb|EOA33742.1| hypothetical protein
CARUB_v10019938mg [Capsella rubella]
Length = 644
Score = 73.6 bits (179), Expect = 2e-11
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ EATVGCRV ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 605 FMARKQVTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 644
>gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
Group] gi|77556035|gb|ABA98831.1| Plus-3 domain
containing protein, expressed [Oryza sativa Japonica
Group] gi|215697432|dbj|BAG91426.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 522
Score = 73.6 bits (179), Expect = 2e-11
Identities = 34/40 (85%), Positives = 39/40 (97%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
+MARKQ+IEAT+G +VP+NDGRRHALTLTVSDYKRRRGLL
Sbjct: 483 YMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 522
>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
78902-80833 [Arabidopsis thaliana]
gi|332195649|gb|AEE33770.1| Paf1C-like transcription
factor [Arabidopsis thaliana]
Length = 643
Score = 73.6 bits (179), Expect = 2e-11
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +1
Query: 19 FMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 138
FMARKQ EATVGCRV ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 604 FMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643