BLASTX nr result

ID: Jatropha_contig00003526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00003526
         (443 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006342357.1| PREDICTED: 40S ribosomal protein S3-2-like [...    58   1e-06
ref|XP_004243723.1| PREDICTED: 40S ribosomal protein S3-3-like [...    58   1e-06
gb|ERN16084.1| hypothetical protein AMTR_s00030p00157370 [Ambore...    57   3e-06
gb|ERN11212.1| hypothetical protein AMTR_s00024p00219330 [Ambore...    55   7e-06

>ref|XP_006342357.1| PREDICTED: 40S ribosomal protein S3-2-like [Solanum tuberosum]
          Length = 239

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -1

Query: 308 GKQGPTTPLPDLVTIHPPKEEEEYAR 231
           GKQGPTTPLPDLVTIHPPKEEEEY R
Sbjct: 199 GKQGPTTPLPDLVTIHPPKEEEEYMR 224


>ref|XP_004243723.1| PREDICTED: 40S ribosomal protein S3-3-like [Solanum lycopersicum]
          Length = 239

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -1

Query: 308 GKQGPTTPLPDLVTIHPPKEEEEYAR 231
           GKQGPTTPLPDLVTIHPPKEEEEY R
Sbjct: 199 GKQGPTTPLPDLVTIHPPKEEEEYLR 224


>gb|ERN16084.1| hypothetical protein AMTR_s00030p00157370 [Amborella trichopoda]
          Length = 233

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -1

Query: 308 GKQGPTTPLPDLVTIHPPKEEEEYAR 231
           GKQGPTTPLPDLVTIH PKEEEEYAR
Sbjct: 196 GKQGPTTPLPDLVTIHTPKEEEEYAR 221


>gb|ERN11212.1| hypothetical protein AMTR_s00024p00219330 [Amborella trichopoda]
          Length = 233

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -1

Query: 308 GKQGPTTPLPDLVTIHPPKEEEEYAR 231
           GKQGPTTPLPDLVTIH PKEE+EYAR
Sbjct: 196 GKQGPTTPLPDLVTIHTPKEEDEYAR 221


Top