BLASTX nr result

ID: Jatropha_contig00003248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00003248
         (497 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001109510.1| hypothetical protein Poptr_cp031 [Populus tr...    87   1e-15

>ref|YP_001109510.1| hypothetical protein Poptr_cp031 [Populus trichocarpa]
           gi|133712070|gb|ABO36713.1| hypothetical protein
           Poptr_cp031 [Populus trichocarpa]
          Length = 79

 Score = 87.4 bits (215), Expect(2) = 1e-15
 Identities = 41/47 (87%), Positives = 43/47 (91%)
 Frame = +3

Query: 303 FFVKSRLLINFYSNTERKGQYTGWVEEVVILGSTHDPKLGNIKEYTN 443
           FFVKSRLLI FYSN ERKGQYTGWVEEVVILG THDPKL +IKEYT+
Sbjct: 23  FFVKSRLLITFYSNIERKGQYTGWVEEVVILGPTHDPKLRDIKEYTS 69



 Score = 21.2 bits (43), Expect(2) = 1e-15
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 235 ILDQIHIEKGSISFFLKM*KKNIFL 309
           +L QI IEK  ISF L +  +  F+
Sbjct: 1   MLCQIRIEKRKISFLLGILGRTFFV 25


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