BLASTX nr result
ID: Jatropha_contig00003212
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00003212
(157 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002720149.1| rpl16 [Jatropha curcas] gi|224979601|gb|ACN7... 67 2e-09
ref|XP_004228902.1| PREDICTED: 50S ribosomal protein L16, chloro... 67 3e-09
gb|EPS74512.1| hypothetical protein M569_00229, partial [Genlise... 65 7e-09
gb|AGP50868.1| ribosomal protein L16 (chloroplast) [Hordeum vulg... 64 2e-08
gb|AGP50792.1| ribosomal protein L16 (chloroplast) [Hordeum vulg... 64 2e-08
ref|YP_001381692.1| ribosomal protein L16 [Medicago truncatula] 64 2e-08
ref|XP_003605598.1| 50S ribosomal protein L14 [Medicago truncatu... 63 4e-08
gb|ABB13381.1| ribosomal protein L16 large subunit [Danthoniopsi... 61 1e-07
gb|ADJ57934.1| ribosomal protein large subunit 16 [Solanum torvum] 61 1e-07
ref|YP_008239268.1| ribosomal protein L16 (chloroplast) [Triticu... 61 2e-07
ref|YP_008239207.1| ribosomal protein L16 (chloroplast) [Secale ... 61 2e-07
gb|EMS49986.1| 50S ribosomal protein L14, chloroplastic [Triticu... 61 2e-07
gb|ABA00949.1| ribosomal protein L16 [Harrisia earlei] 61 2e-07
gb|AFI56213.1| ribosomal protein L16, partial (chloroplast) [Alt... 60 2e-07
ref|YP_002456496.1| ribosomal protein L16 [Trifolium subterraneu... 60 2e-07
gb|AAS99939.1| ribosomal protein L16 [Castanea dentata] gi|46519... 60 3e-07
gb|AAS99956.1| ribosomal protein L16 [Fagus grandifolia] 60 3e-07
gb|ABB13401.1| ribosomal protein L16 large subunit [Zeugites ame... 60 3e-07
gb|AEX94534.1| ribosomal protein L16 (chloroplast) [Phormium tenax] 60 3e-07
gb|ABB13384.1| ribosomal protein L16 large subunit [Isachne arun... 60 4e-07
>ref|YP_002720149.1| rpl16 [Jatropha curcas] gi|224979601|gb|ACN72728.1| rpl16 [Jatropha
curcas]
Length = 135
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +1
Query: 64 NPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+PQRPRFRKQHRGRMKGKAFRANRISFGRYA
Sbjct: 3 SPQRPRFRKQHRGRMKGKAFRANRISFGRYA 33
>ref|XP_004228902.1| PREDICTED: 50S ribosomal protein L16, chloroplastic-like [Solanum
lycopersicum]
Length = 229
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/52 (59%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = +1
Query: 7 VVEMEWL**--RWA*ETSITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+ +EW+ RW E +I YNP+R RFRKQHRGRMKG ++R NRISFG+YA
Sbjct: 77 IARVEWIREGRRWNSEPTINYNPKRTRFRKQHRGRMKGISYRGNRISFGKYA 128
>gb|EPS74512.1| hypothetical protein M569_00229, partial [Genlisea aurea]
Length = 153
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +1
Query: 4 SVVEMEWL**RWA*ETSITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
SVVEME+ ET+I YNP+R RFRKQHRGRMKG ++R N I FG+YA
Sbjct: 8 SVVEMEF-------ETTINYNPKRTRFRKQHRGRMKGMSYRGNHICFGKYA 51
>gb|AGP50868.1| ribosomal protein L16 (chloroplast) [Hordeum vulgare subsp.
spontaneum] gi|521301146|gb|AGP50947.1| ribosomal
protein L16 (chloroplast) [Hordeum vulgare subsp.
spontaneum]
Length = 151
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 52 SITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+I YNP+R RFRKQHRGRMKGK+FR NRI FGRYA
Sbjct: 14 TIDYNPKRTRFRKQHRGRMKGKSFRGNRICFGRYA 48
>gb|AGP50792.1| ribosomal protein L16 (chloroplast) [Hordeum vulgare subsp.
vulgare]
Length = 144
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 52 SITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+I YNP+R RFRKQHRGRMKGK+FR NRI FGRYA
Sbjct: 7 TIDYNPKRTRFRKQHRGRMKGKSFRGNRICFGRYA 41
>ref|YP_001381692.1| ribosomal protein L16 [Medicago truncatula]
Length = 139
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 52 SITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
SI YNP+R RFRKQHRGRMKGKA+R N ISFG+YA
Sbjct: 3 SINYNPKRTRFRKQHRGRMKGKAYRGNTISFGKYA 37
>ref|XP_003605598.1| 50S ribosomal protein L14 [Medicago truncatula]
gi|357471547|ref|XP_003606058.1| 50S ribosomal protein
L14 [Medicago truncatula] gi|355506653|gb|AES87795.1|
50S ribosomal protein L14 [Medicago truncatula]
gi|355507113|gb|AES88255.1| 50S ribosomal protein L14
[Medicago truncatula]
Length = 141
Score = 62.8 bits (151), Expect = 4e-08
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = +1
Query: 52 SITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+I YNP+R RFRKQHRGRMKGKA+R N ISFG+YA
Sbjct: 5 TINYNPKRTRFRKQHRGRMKGKAYRGNTISFGKYA 39
>gb|ABB13381.1| ribosomal protein L16 large subunit [Danthoniopsis petiolata]
gi|77964082|gb|ABB13382.1| ribosomal protein L16 large
subunit [Loudetia simplex]
Length = 47
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 61 YNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
YNP+R RFRKQHRGRMKGK++R NRI FGRYA
Sbjct: 1 YNPKRTRFRKQHRGRMKGKSYRGNRICFGRYA 32
>gb|ADJ57934.1| ribosomal protein large subunit 16 [Solanum torvum]
Length = 140
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = +1
Query: 46 ETSITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
E +I YNP+R RFRKQHRGRMKG + R NRISFG+YA
Sbjct: 3 EPTINYNPKRTRFRKQHRGRMKGISIRGNRISFGKYA 39
>ref|YP_008239268.1| ribosomal protein L16 (chloroplast) [Triticum urartu]
gi|521301445|gb|AGP51242.1| ribosomal protein L16
(chloroplast) [Triticum urartu]
Length = 151
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = +1
Query: 52 SITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+I YNP+R RFRKQHRGRMKGK+ R NRI FGRYA
Sbjct: 14 TIDYNPKRTRFRKQHRGRMKGKSCRGNRICFGRYA 48
>ref|YP_008239207.1| ribosomal protein L16 (chloroplast) [Secale cereale]
gi|533310142|ref|YP_008474336.1| ribosomal protein L16
(chloroplast) [Aegilops tauschii]
gi|533310238|ref|YP_008474428.1| ribosomal protein L16
(chloroplast) [Aegilops speltoides]
gi|384406889|gb|AFH89546.1| ribosomal protein L16
(chloroplast) [Aegilops tauschii]
gi|394986529|gb|AFN42410.1| ribosomal protein L16
(chloroplast) [Aegilops speltoides]
gi|521301306|gb|AGP51105.1| ribosomal protein L16
(chloroplast) [Secale cereale]
gi|521301384|gb|AGP51182.1| ribosomal protein L16
(chloroplast) [Triticum monococcum subsp. aegilopoides]
gi|521301524|gb|AGP51320.1| ribosomal protein L16
(chloroplast) [Triticum aestivum]
Length = 144
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = +1
Query: 52 SITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+I YNP+R RFRKQHRGRMKGK+ R NRI FGRYA
Sbjct: 7 TIDYNPKRTRFRKQHRGRMKGKSCRGNRICFGRYA 41
>gb|EMS49986.1| 50S ribosomal protein L14, chloroplastic [Triticum urartu]
gi|474314961|gb|EMS62066.1| 50S ribosomal protein L14,
chloroplastic [Triticum urartu]
gi|474361021|gb|EMS63305.1| 50S ribosomal protein L14,
chloroplastic [Triticum urartu]
Length = 191
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = +1
Query: 52 SITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+I YNP+R RFRKQHRGRMKGK+ R NRI FGRYA
Sbjct: 7 TIDYNPKRTRFRKQHRGRMKGKSCRGNRICFGRYA 41
>gb|ABA00949.1| ribosomal protein L16 [Harrisia earlei]
Length = 54
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +1
Query: 55 ITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+ YNP+R RFRKQHRGRMKG ++R NRISFGRYA
Sbjct: 1 MNYNPKRTRFRKQHRGRMKGLSYRGNRISFGRYA 34
>gb|AFI56213.1| ribosomal protein L16, partial (chloroplast) [Alternanthera
geniculata]
Length = 51
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +1
Query: 55 ITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+ YNP+R RFRKQHRGRMKG ++R NRISFGRYA
Sbjct: 1 MNYNPKRTRFRKQHRGRMKGISYRGNRISFGRYA 34
>ref|YP_002456496.1| ribosomal protein L16 [Trifolium subterraneum]
gi|193788981|gb|ACF20577.1| ribosomal protein L16
[Trifolium subterraneum]
Length = 136
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +1
Query: 55 ITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+ YNP+R RFRKQHRGRMKGKA+R N+I FG+YA
Sbjct: 1 MNYNPKRTRFRKQHRGRMKGKAYRGNKICFGKYA 34
>gb|AAS99939.1| ribosomal protein L16 [Castanea dentata] gi|46519246|gb|AAS99940.1|
ribosomal protein L16 [Castanea dentata]
gi|46519248|gb|AAS99941.1| ribosomal protein L16
[Castanea pumila var. pumila] gi|46519250|gb|AAS99942.1|
ribosomal protein L16 [Castanea pumila var. pumila]
gi|46519252|gb|AAS99943.1| ribosomal protein L16
[Castanea ozarkensis] gi|46519254|gb|AAS99944.1|
ribosomal protein L16 [Castanea ozarkensis]
gi|46519256|gb|AAS99945.1| ribosomal protein L16
[Castanea sativa] gi|46519258|gb|AAS99946.1| ribosomal
protein L16 [Castanea sativa] gi|46519260|gb|AAS99947.1|
ribosomal protein L16 [Castanea mollissima]
gi|46519262|gb|AAS99948.1| ribosomal protein L16
[Castanea mollissima] gi|46519264|gb|AAS99949.1|
ribosomal protein L16 [Castanea seguinii]
gi|46519266|gb|AAS99950.1| ribosomal protein L16
[Castanea seguinii] gi|46519268|gb|AAS99951.1| ribosomal
protein L16 [Castanea henryi] gi|46519270|gb|AAS99952.1|
ribosomal protein L16 [Castanea henryi]
gi|46519272|gb|AAS99953.1| ribosomal protein L16
[Castanea crenata] gi|46519274|gb|AAS99954.1| ribosomal
protein L16 [Castanea crenata]
gi|46519276|gb|AAS99955.1| ribosomal protein L16
[Quercus falcata]
Length = 55
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 52 SITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+I YNP+R RFRKQHRGRMKG ++R NRI FGRYA
Sbjct: 1 TINYNPKRARFRKQHRGRMKGISYRGNRICFGRYA 35
>gb|AAS99956.1| ribosomal protein L16 [Fagus grandifolia]
Length = 55
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 52 SITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
+I YNP+R RFRKQHRGRMKG ++R NRI FGRYA
Sbjct: 1 TINYNPKRTRFRKQHRGRMKGISYRGNRICFGRYA 35
>gb|ABB13401.1| ribosomal protein L16 large subunit [Zeugites americanus var.
pringlei]
Length = 47
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +1
Query: 61 YNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
YNP+R RFRKQHRGRMKGK+ R NRI FGRYA
Sbjct: 1 YNPKRTRFRKQHRGRMKGKSLRGNRICFGRYA 32
>gb|AEX94534.1| ribosomal protein L16 (chloroplast) [Phormium tenax]
Length = 139
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = +1
Query: 52 SITYNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
SI YNP+R RFRKQHRGRMKG + R NRISFG+YA
Sbjct: 3 SINYNPKRTRFRKQHRGRMKGISCRGNRISFGKYA 37
>gb|ABB13384.1| ribosomal protein L16 large subunit [Isachne arundinacea]
Length = 47
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +1
Query: 61 YNPQRPRFRKQHRGRMKGKAFRANRISFGRYA 156
YNP+R RFRKQHRGRMKGK+ R NRI FGRYA
Sbjct: 1 YNPKRTRFRKQHRGRMKGKSHRGNRICFGRYA 32