BLASTX nr result

ID: Jatropha_contig00003162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00003162
         (526 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...   106   3e-21
ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulg...    80   3e-13

>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score =  106 bits (264), Expect = 3e-21
 Identities = 54/58 (93%), Positives = 54/58 (93%)
 Frame = -3

Query: 524 RVAERSKATDCKSVEVFLRRFESCLSHFFVVDFREEKGGIRQRRKAHRAKLFLFFFCR 351
           RVAE SKATDCKSVEVFLRRFESCLSH FVVDFREEKGGIRQRRKAHRAKLFL  FCR
Sbjct: 35  RVAEWSKATDCKSVEVFLRRFESCLSHLFVVDFREEKGGIRQRRKAHRAKLFL--FCR 90


>ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435151|ref|YP_004222369.1| hypothetical
           protein BevumaM_p136 [Beta vulgaris subsp. maritima]
           gi|346683242|ref|YP_004842174.1| hypothetical protein
           BemaM_p130 [Beta macrocarpa] gi|9049306|dbj|BAA99316.1|
           orf107b [Beta vulgaris subsp. vulgaris]
           gi|317905601|emb|CBJ14008.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439884|emb|CBJ17584.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148038|emb|CBJ20702.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500160|emb|CBX24979.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977914|emb|CBL54138.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 107

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 45/65 (69%), Positives = 50/65 (76%)
 Frame = +2

Query: 11  IHPEPFFSSTSPLQSSIKLAFPRRY*IKWGSFFPSPIVCIGLASSRTKEAFWRARACRKA 190
           ++P   FSST PLQSSIKLAF RR  +     FPSPIVCIGLASSR+K  + RARACRKA
Sbjct: 47  LNPSRAFSSTFPLQSSIKLAFSRRSEM---GVFPSPIVCIGLASSRSK-LYLRARACRKA 102

Query: 191 DHYIS 205
           DHYIS
Sbjct: 103 DHYIS 107


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