BLASTX nr result
ID: Jatropha_contig00003134
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00003134
(547 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]... 119 2e-31
gb|ACU18876.1| unknown [Glycine max] 127 2e-31
ref|YP_002720170.1| ycf1 [Jatropha curcas] gi|224979621|gb|ACN72... 130 3e-28
gb|AGS12737.1| Ycf1, partial (chloroplast) [Goupia glabra] 128 1e-27
gb|AGS12751.1| Ycf1, partial (chloroplast) [Viola kitaibeliana] 127 1e-27
gb|AEK71803.1| hypothetical chloroplast RF1 [Erythrospermum phyt... 127 1e-27
gb|AEK71796.1| hypothetical chloroplast RF1 [Malesherbia lineari... 127 1e-27
ref|XP_002338822.1| predicted protein [Populus trichocarpa] 127 1e-27
ref|XP_002338058.1| predicted protein [Populus trichocarpa] 127 1e-27
ref|XP_002338037.1| predicted protein [Populus trichocarpa] 127 1e-27
ref|YP_001109565.1| Ycf1-like [Populus trichocarpa] gi|182702261... 127 1e-27
ref|YP_001109554.1| hypothetical protein Poptr_cp076 [Populus tr... 127 1e-27
ref|YP_665614.1| ycf1 [Populus alba] gi|118574762|sp|Q14FA0.1|YC... 127 1e-27
ref|NP_904157.1| hypothetical protein AmtrCp086 [Amborella trich... 114 2e-27
gb|AGS12743.1| Ycf1, partial (chloroplast) [Microdesmis puberula] 126 3e-27
gb|AGS12734.1| Ycf1, partial (chloroplast) [Ctenolophon engleria... 126 3e-27
gb|AGS12720.1| Ycf1, partial (chloroplast) [Balanops vieillardii] 126 3e-27
ref|YP_008082790.1| hypothetical chloroplast RF19 [Prinsepia uti... 126 3e-27
ref|YP_007025526.1| hypothetical chloroplast RF1 (chloroplast) [... 126 3e-27
ref|YP_007025441.1| hypothetical chloroplast RF1 (chloroplast) [... 126 3e-27
>ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]
gi|438687662|emb|CCP47191.1| YCF1 protein (chloroplast)
[Tectona grandis] gi|438688346|emb|CCP47280.1| YCF1
protein (chloroplast) [Tectona grandis]
gi|438688470|emb|CCP47369.1| YCF1 protein (chloroplast)
[Tectona grandis]
Length = 1898
Score = 119 bits (299), Expect(2) = 2e-31
Identities = 61/74 (82%), Positives = 68/74 (91%)
Frame = -2
Query: 222 RKEKGRFVMILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEE 43
+++KGRFVMI +SF+LGNLVSLCMKIINSVV VGLYYGFLTTFS GPSYLFLLRA+V+
Sbjct: 33 KEKKGRFVMIFQSFLLGNLVSLCMKIINSVVAVGLYYGFLTTFSIGPSYLFLLRAQVM-- 90
Query: 42 GEEGTEKKVSATTG 1
EEGTEKKVSATTG
Sbjct: 91 -EEGTEKKVSATTG 103
Score = 41.6 bits (96), Expect(2) = 2e-31
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -3
Query: 266 WKVSKSSYNNPEIAIEKKK 210
WKV KSSYNNPEIAIEKKK
Sbjct: 15 WKVQKSSYNNPEIAIEKKK 33
>gb|ACU18876.1| unknown [Glycine max]
Length = 299
Score = 127 bits (318), Expect(2) = 2e-31
Identities = 65/79 (82%), Positives = 70/79 (88%)
Frame = -2
Query: 237 SRNCNRKEKGRFVMILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRA 58
SRNCNRKEK RF MI +SFIL NLVSLCMKIINS+VVVGLYY FLTTFS GPSYLFLLRA
Sbjct: 25 SRNCNRKEKERFEMIFQSFILDNLVSLCMKIINSIVVVGLYYEFLTTFSIGPSYLFLLRA 84
Query: 57 RVIEEGEEGTEKKVSATTG 1
R++ EEGTEKK+SATTG
Sbjct: 85 RLV---EEGTEKKISATTG 100
Score = 34.3 bits (77), Expect(2) = 2e-31
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3
Query: 266 WKVSKSSYNNPEIAIEKK 213
WKV KS YNNP+IAIEK+
Sbjct: 7 WKVEKSLYNNPKIAIEKE 24
>ref|YP_002720170.1| ycf1 [Jatropha curcas] gi|224979621|gb|ACN72748.1| ycf1 [Jatropha
curcas]
Length = 1907
Score = 130 bits (326), Expect = 3e-28
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = -2
Query: 198 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 19
MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 60
Query: 18 VSATTG 1
VSATTG
Sbjct: 61 VSATTG 66
>gb|AGS12737.1| Ycf1, partial (chloroplast) [Goupia glabra]
Length = 167
Score = 128 bits (321), Expect = 1e-27
Identities = 65/67 (97%), Positives = 66/67 (98%)
Frame = -2
Query: 201 VMILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEK 22
+MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEK
Sbjct: 1 MMILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEK 60
Query: 21 KVSATTG 1
KVSATTG
Sbjct: 61 KVSATTG 67
>gb|AGS12751.1| Ycf1, partial (chloroplast) [Viola kitaibeliana]
Length = 168
Score = 127 bits (320), Expect = 1e-27
Identities = 64/67 (95%), Positives = 66/67 (98%)
Frame = -2
Query: 201 VMILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEK 22
+MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEK
Sbjct: 1 MMILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEK 60
Query: 21 KVSATTG 1
K+SATTG
Sbjct: 61 KISATTG 67
>gb|AEK71803.1| hypothetical chloroplast RF1 [Erythrospermum phytolaccoides]
Length = 269
Score = 127 bits (320), Expect = 1e-27
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = -2
Query: 198 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 19
MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK 60
Query: 18 VSATTG 1
VSATTG
Sbjct: 61 VSATTG 66
>gb|AEK71796.1| hypothetical chloroplast RF1 [Malesherbia linearifolia]
Length = 172
Score = 127 bits (320), Expect = 1e-27
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = -2
Query: 198 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 19
MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK 60
Query: 18 VSATTG 1
VSATTG
Sbjct: 61 VSATTG 66
>ref|XP_002338822.1| predicted protein [Populus trichocarpa]
Length = 173
Score = 127 bits (320), Expect = 1e-27
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = -2
Query: 198 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 19
MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK 60
Query: 18 VSATTG 1
VSATTG
Sbjct: 61 VSATTG 66
>ref|XP_002338058.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 127 bits (320), Expect = 1e-27
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = -2
Query: 198 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 19
MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK 60
Query: 18 VSATTG 1
VSATTG
Sbjct: 61 VSATTG 66
>ref|XP_002338037.1| predicted protein [Populus trichocarpa]
Length = 130
Score = 127 bits (320), Expect = 1e-27
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = -2
Query: 198 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 19
MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK 60
Query: 18 VSATTG 1
VSATTG
Sbjct: 61 VSATTG 66
>ref|YP_001109565.1| Ycf1-like [Populus trichocarpa] gi|182702261|sp|A4GYX4.1|YCF1_POPTR
RecName: Full=Putative membrane protein ycf1
gi|133712126|gb|ABO36769.1| Ycf1-like [Populus
trichocarpa]
Length = 1822
Score = 127 bits (320), Expect = 1e-27
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = -2
Query: 198 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 19
MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK 60
Query: 18 VSATTG 1
VSATTG
Sbjct: 61 VSATTG 66
>ref|YP_001109554.1| hypothetical protein Poptr_cp076 [Populus trichocarpa]
gi|133712115|gb|ABO36758.1| conserved hypothetical
protein [Populus trichocarpa]
Length = 601
Score = 127 bits (320), Expect = 1e-27
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = -2
Query: 198 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 19
MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK 60
Query: 18 VSATTG 1
VSATTG
Sbjct: 61 VSATTG 66
>ref|YP_665614.1| ycf1 [Populus alba] gi|118574762|sp|Q14FA0.1|YCF1_POPAL RecName:
Full=Putative membrane protein ycf1
gi|109945574|dbj|BAE97262.1| ycf1 [Populus alba]
Length = 1820
Score = 127 bits (320), Expect = 1e-27
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = -2
Query: 198 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 19
MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK 60
Query: 18 VSATTG 1
VSATTG
Sbjct: 61 VSATTG 66
>ref|NP_904157.1| hypothetical protein AmtrCp086 [Amborella trichopoda]
gi|34481687|emb|CAD45164.1| ycf1 [Amborella trichopoda]
Length = 1829
Score = 114 bits (284), Expect(2) = 2e-27
Identities = 60/74 (81%), Positives = 68/74 (91%)
Frame = -2
Query: 222 RKEKGRFVMILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEE 43
+KE+G F+MILKSF+LGNL+SLCMKI NSVVVVGLYYGF+TTFS GPSYLFLLRARV+
Sbjct: 29 KKERG-FLMILKSFLLGNLLSLCMKIRNSVVVVGLYYGFITTFSIGPSYLFLLRARVM-- 85
Query: 42 GEEGTEKKVSATTG 1
EEGTEK+VSATTG
Sbjct: 86 -EEGTEKEVSATTG 98
Score = 33.9 bits (76), Expect(2) = 2e-27
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 266 WKVSKSSYNNPEIAIEKKKGG 204
WKV KSSYNN E A EKK+ G
Sbjct: 13 WKVKKSSYNNRESATEKKERG 33
>gb|AGS12743.1| Ycf1, partial (chloroplast) [Microdesmis puberula]
Length = 167
Score = 126 bits (317), Expect = 3e-27
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -2
Query: 201 VMILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEK 22
+MI KSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEK
Sbjct: 1 MMIFKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEK 60
Query: 21 KVSATTG 1
KVSATTG
Sbjct: 61 KVSATTG 67
>gb|AGS12734.1| Ycf1, partial (chloroplast) [Ctenolophon englerianus]
Length = 256
Score = 126 bits (317), Expect = 3e-27
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -2
Query: 201 VMILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEK 22
+MI KSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEK
Sbjct: 1 MMIFKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEK 60
Query: 21 KVSATTG 1
KVSATTG
Sbjct: 61 KVSATTG 67
>gb|AGS12720.1| Ycf1, partial (chloroplast) [Balanops vieillardii]
Length = 256
Score = 126 bits (317), Expect = 3e-27
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -2
Query: 201 VMILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEK 22
+MI KSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEK
Sbjct: 1 MMIFKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEK 60
Query: 21 KVSATTG 1
KVSATTG
Sbjct: 61 KVSATTG 67
>ref|YP_008082790.1| hypothetical chloroplast RF19 [Prinsepia utilis]
gi|501418879|gb|AGL94756.1| hypothetical chloroplast
RF19 [Prinsepia utilis]
Length = 1836
Score = 126 bits (317), Expect = 3e-27
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = -2
Query: 198 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 19
MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 18 VSATTG 1
VSATTG
Sbjct: 61 VSATTG 66
>ref|YP_007025526.1| hypothetical chloroplast RF1 (chloroplast) [Fragaria virginiana]
gi|357198883|gb|AET62798.1| hypothetical chloroplast RF1
(chloroplast) [Fragaria virginiana]
Length = 1916
Score = 126 bits (317), Expect = 3e-27
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = -2
Query: 198 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 19
MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 18 VSATTG 1
VSATTG
Sbjct: 61 VSATTG 66
>ref|YP_007025441.1| hypothetical chloroplast RF1 (chloroplast) [Fragaria chiloensis]
gi|357198797|gb|AET62713.1| hypothetical chloroplast RF1
(chloroplast) [Fragaria chiloensis]
Length = 1916
Score = 126 bits (317), Expect = 3e-27
Identities = 64/66 (96%), Positives = 65/66 (98%)
Frame = -2
Query: 198 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 19
MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 18 VSATTG 1
VSATTG
Sbjct: 61 VSATTG 66