BLASTX nr result

ID: Jatropha_contig00002819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00002819
         (319 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGL39699.1| NAC transcription factor 043 [Jatropha curcas]          43   7e-08
ref|XP_002315336.1| NAC domain protein, IPR003441 [Populus trich...    39   3e-06

>gb|AGL39699.1| NAC transcription factor 043 [Jatropha curcas]
          Length = 428

 Score = 42.7 bits (99), Expect(2) = 7e-08
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +3

Query: 63  IDFLNKENEDLKRSIHDKQ 119
           IDFLNKENEDLKRSIHDKQ
Sbjct: 410 IDFLNKENEDLKRSIHDKQ 428



 Score = 39.3 bits (90), Expect(2) = 7e-08
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +2

Query: 5   TLKLEMMSAHAMINILQSR 61
           TLKLEMMSAHAMINILQSR
Sbjct: 391 TLKLEMMSAHAMINILQSR 409


>ref|XP_002315336.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|118483306|gb|ABK93555.1| unknown [Populus
           trichocarpa] gi|222864376|gb|EEF01507.1| no apical
           meristem family protein [Populus trichocarpa]
          Length = 440

 Score = 39.3 bits (90), Expect(2) = 3e-06
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +2

Query: 5   TLKLEMMSAHAMINILQSR 61
           TLKLEMMSAHAMINILQSR
Sbjct: 404 TLKLEMMSAHAMINILQSR 422



 Score = 37.0 bits (84), Expect(2) = 3e-06
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 63  IDFLNKENEDLKRSIHDK 116
           +DFLNKENEDLKRS+H K
Sbjct: 423 VDFLNKENEDLKRSVHAK 440


Top