BLASTX nr result
ID: Jatropha_contig00001965
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00001965
(577 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFQ39506.1| putative chloroplast RF2 [Fragaria nilgerrensis] 171 3e-85
ref|NP_084839.1| Ycf2 [Lotus japonicus] gi|13518498|ref|NP_08485... 169 4e-83
ref|YP_007474773.1| hypothetical chloroplast RF2 (chloroplast) [... 169 9e-83
ref|YP_007353810.1| hypothetical chloroplast RF2 (chloroplast) [... 169 9e-83
gb|AEX99575.1| hypothetical chloroplast RF2 (chloroplast) [Chrys... 169 9e-83
ref|YP_007353827.1| hypothetical chloroplast RF2 (chloroplast) [... 169 9e-83
ref|YP_007624839.1| Ycf2 protein (chloroplast) [Artemisia frigid... 169 2e-82
gb|AGK82956.1| hypothetical protein Ycf2 (chloroplast) [Lupinus ... 169 4e-80
gb|AFU96477.1| Ycf2, partial (chloroplast) [Schistostemon retusum] 168 6e-80
ref|YP_007890417.1| hypothetical chloroplast RF2 (chloroplast) [... 172 3e-79
gb|AFU96449.1| Ycf2, partial (chloroplast) [Ctenolophon engleria... 163 2e-78
ref|YP_008145915.1| hypothetical chloroplast RF2 (chloroplast) [... 165 4e-78
gb|AFU96440.1| Ycf2, partial (chloroplast) [Balanops pachyphylla] 161 5e-78
gb|AFU96475.1| Ycf2, partial (chloroplast) [Quiina glaziovii] 163 3e-77
gb|AFU96466.1| Ycf2, partial (chloroplast) [Medusagyne oppositif... 163 3e-77
gb|AFU96467.1| Ycf2, partial (chloroplast) [Microdesmis casearii... 160 3e-77
ref|YP_740694.1| hypothetical chloroplast RF2 [Nandina domestica... 162 4e-77
gb|AFU96439.1| Ycf2, partial (chloroplast) [Averrhoa carambola] 161 4e-77
ref|YP_005088849.1| Ycf2 (chloroplast) [Millettia pinnata] gi|37... 173 5e-77
gb|AEK71423.1| hypothetical chloroplast RF2 [Albizia julibrissin] 176 1e-76
>gb|AFQ39506.1| putative chloroplast RF2 [Fragaria nilgerrensis]
Length = 2273
Score = 171 bits (434), Expect(2) = 3e-85
Identities = 86/102 (84%), Positives = 87/102 (85%)
Frame = -3
Query: 575 RAIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 396
RAIY IADISGT LTEGQIV+FERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC
Sbjct: 1125 RAIYSIADISGTLLTEGQIVSFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 1184
Query: 395 SEKYLPXXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLSKW 270
SEKYLP CVEKGQMYRTFQRDSAFSTLSKW
Sbjct: 1185 SEKYLPSEKRKGRGRCLKKCVEKGQMYRTFQRDSAFSTLSKW 1226
Score = 170 bits (430), Expect(2) = 3e-85
Identities = 80/93 (86%), Positives = 87/93 (93%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 KMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 97
K ++FQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKF+SIFHDIMHGS ISWRIL
Sbjct: 1225 KWNIFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFLSIFHDIMHGSGISWRIL 1284
Query: 96 QKKWCLPQWNLISEISSKCLHNFSV-EEMIHRN 1
QKK CLPQWN+IS+ISSKCLHN + EEM+HRN
Sbjct: 1285 QKKLCLPQWNMISDISSKCLHNLLLSEEMVHRN 1317
>ref|NP_084839.1| Ycf2 [Lotus japonicus] gi|13518498|ref|NP_084856.1| Ycf2 [Lotus
japonicus] gi|23822370|sp|Q9B1K6.1|YCF2_LOTJA RecName:
Full=Protein ycf2 gi|13359021|dbj|BAB33238.1|
hypothetical protein [Lotus japonicus]
gi|13359039|dbj|BAB33256.1| hypothetical protein [Lotus
japonicus]
Length = 2298
Score = 169 bits (429), Expect(2) = 4e-83
Identities = 81/93 (87%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 KMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 97
K +LFQTY+PWFLTSTGYKYLN IFLDTFSDLLPILSSSQKFVSIFHDIMH SDISWRIL
Sbjct: 1232 KWNLFQTYIPWFLTSTGYKYLNFIFLDTFSDLLPILSSSQKFVSIFHDIMHRSDISWRIL 1291
Query: 96 QKKWCLPQWNLISEISSKCLHNFSV-EEMIHRN 1
QKKWCL QWNLISEISSKC HN + EE+IHRN
Sbjct: 1292 QKKWCLSQWNLISEISSKCFHNLLLSEEIIHRN 1324
Score = 164 bits (416), Expect(2) = 4e-83
Identities = 82/102 (80%), Positives = 83/102 (81%)
Frame = -3
Query: 575 RAIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 396
RAIY IADIS TPLTEGQIVNFERTYCQPLSDMNL DSEGKNLHQYL FNSNMGLIH PC
Sbjct: 1132 RAIYSIADISVTPLTEGQIVNFERTYCQPLSDMNLPDSEGKNLHQYLKFNSNMGLIHIPC 1191
Query: 395 SEKYLPXXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLSKW 270
SEKYLP C+EKGQMYRTFQRDS FSTLSKW
Sbjct: 1192 SEKYLPSENRKKGIPCLKKCLEKGQMYRTFQRDSVFSTLSKW 1233
>ref|YP_007474773.1| hypothetical chloroplast RF2 (chloroplast) [Chrysanthemum indicum]
gi|452849111|ref|YP_007474789.1| hypothetical chloroplast
RF2 (chloroplast) [Chrysanthemum indicum]
gi|372863250|gb|AEX99322.1| hypothetical chloroplast RF2
(chloroplast) [Chrysanthemum indicum]
gi|372863266|gb|AEX99338.1| hypothetical chloroplast RF2
(chloroplast) [Chrysanthemum indicum]
gi|372863489|gb|AEX99558.1| hypothetical chloroplast RF2
(chloroplast) [Chrysanthemum indicum]
Length = 2291
Score = 169 bits (427), Expect(2) = 9e-83
Identities = 86/104 (82%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Frame = -3
Query: 575 RAIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 396
RAIY IADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNL+QYLNFNSNMGLIHTPC
Sbjct: 1118 RAIYSIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLYQYLNFNSNMGLIHTPC 1177
Query: 395 SEKYLPXXXXXXXXXXXXXCVEKGQMYRTFQ--RDSAFSTLSKW 270
SEKYLP CVEKGQMYRTFQ RDSA+STLSKW
Sbjct: 1178 SEKYLPSEKRKKRSLCLKKCVEKGQMYRTFQRERDSAYSTLSKW 1221
Score = 164 bits (415), Expect(2) = 9e-83
Identities = 79/93 (84%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 KMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 97
K +LFQTYMPWFLTSTGY+YL +FLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL
Sbjct: 1220 KWNLFQTYMPWFLTSTGYRYLKFLFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 1279
Query: 96 QKKWCLPQWNLISEISSKCLHNFSV-EEMIHRN 1
QKK+CLPQWNLISEISSK HN + EEM HRN
Sbjct: 1280 QKKFCLPQWNLISEISSKFFHNLLLSEEMSHRN 1312
>ref|YP_007353810.1| hypothetical chloroplast RF2 (chloroplast) [Chrysanthemum x
morifolium] gi|375298880|gb|AFA45319.1| hypothetical
chloroplast RF2 (chloroplast) [Chrysanthemum x
morifolium]
Length = 2291
Score = 169 bits (427), Expect(2) = 9e-83
Identities = 86/104 (82%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Frame = -3
Query: 575 RAIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 396
RAIY IADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNL+QYLNFNSNMGLIHTPC
Sbjct: 1118 RAIYSIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLYQYLNFNSNMGLIHTPC 1177
Query: 395 SEKYLPXXXXXXXXXXXXXCVEKGQMYRTFQ--RDSAFSTLSKW 270
SEKYLP CVEKGQMYRTFQ RDSA+STLSKW
Sbjct: 1178 SEKYLPSEKRKKRSLCLKKCVEKGQMYRTFQRERDSAYSTLSKW 1221
Score = 164 bits (415), Expect(2) = 9e-83
Identities = 79/93 (84%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 KMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 97
K +LFQTYMPWFLTSTGY+YL +FLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL
Sbjct: 1220 KWNLFQTYMPWFLTSTGYRYLKFLFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 1279
Query: 96 QKKWCLPQWNLISEISSKCLHNFSV-EEMIHRN 1
QKK+CLPQWNLISEISSK HN + EEM HRN
Sbjct: 1280 QKKFCLPQWNLISEISSKFFHNLLLSEEMSHRN 1312
>gb|AEX99575.1| hypothetical chloroplast RF2 (chloroplast) [Chrysanthemum indicum]
Length = 2282
Score = 169 bits (427), Expect(2) = 9e-83
Identities = 86/104 (82%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Frame = -3
Query: 575 RAIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 396
RAIY IADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNL+QYLNFNSNMGLIHTPC
Sbjct: 1118 RAIYSIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLYQYLNFNSNMGLIHTPC 1177
Query: 395 SEKYLPXXXXXXXXXXXXXCVEKGQMYRTFQ--RDSAFSTLSKW 270
SEKYLP CVEKGQMYRTFQ RDSA+STLSKW
Sbjct: 1178 SEKYLPSEKRKKRSLCLKKCVEKGQMYRTFQRERDSAYSTLSKW 1221
Score = 164 bits (415), Expect(2) = 9e-83
Identities = 79/93 (84%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 KMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 97
K +LFQTYMPWFLTSTGY+YL +FLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL
Sbjct: 1220 KWNLFQTYMPWFLTSTGYRYLKFLFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 1279
Query: 96 QKKWCLPQWNLISEISSKCLHNFSV-EEMIHRN 1
QKK+CLPQWNLISEISSK HN + EEM HRN
Sbjct: 1280 QKKFCLPQWNLISEISSKFFHNLLLSEEMSHRN 1312
>ref|YP_007353827.1| hypothetical chloroplast RF2 (chloroplast) [Chrysanthemum x
morifolium] gi|375298897|gb|AFA45336.1| hypothetical
chloroplast RF2 (chloroplast) [Chrysanthemum x
morifolium]
Length = 2282
Score = 169 bits (427), Expect(2) = 9e-83
Identities = 86/104 (82%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Frame = -3
Query: 575 RAIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 396
RAIY IADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNL+QYLNFNSNMGLIHTPC
Sbjct: 1118 RAIYSIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLYQYLNFNSNMGLIHTPC 1177
Query: 395 SEKYLPXXXXXXXXXXXXXCVEKGQMYRTFQ--RDSAFSTLSKW 270
SEKYLP CVEKGQMYRTFQ RDSA+STLSKW
Sbjct: 1178 SEKYLPSEKRKKRSLCLKKCVEKGQMYRTFQRERDSAYSTLSKW 1221
Score = 164 bits (415), Expect(2) = 9e-83
Identities = 79/93 (84%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 KMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 97
K +LFQTYMPWFLTSTGY+YL +FLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL
Sbjct: 1220 KWNLFQTYMPWFLTSTGYRYLKFLFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 1279
Query: 96 QKKWCLPQWNLISEISSKCLHNFSV-EEMIHRN 1
QKK+CLPQWNLISEISSK HN + EEM HRN
Sbjct: 1280 QKKFCLPQWNLISEISSKFFHNLLLSEEMSHRN 1312
>ref|YP_007624839.1| Ycf2 protein (chloroplast) [Artemisia frigida]
gi|470227772|ref|YP_007624858.1| Ycf2 protein
(chloroplast) [Artemisia frigida]
gi|401712241|gb|AFP98866.1| Ycf2 protein (chloroplast)
[Artemisia frigida] gi|401712260|gb|AFP98885.1| Ycf2
protein (chloroplast) [Artemisia frigida]
Length = 2279
Score = 169 bits (427), Expect(2) = 2e-82
Identities = 86/104 (82%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
Frame = -3
Query: 575 RAIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 396
RAIY IADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNL+QYLNFNSNMGLIHTPC
Sbjct: 1118 RAIYSIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLYQYLNFNSNMGLIHTPC 1177
Query: 395 SEKYLPXXXXXXXXXXXXXCVEKGQMYRTFQ--RDSAFSTLSKW 270
SEKYLP CVEKGQMYRTFQ RDSA+STLSKW
Sbjct: 1178 SEKYLPSEKRKKRSLCLKKCVEKGQMYRTFQRERDSAYSTLSKW 1221
Score = 163 bits (412), Expect(2) = 2e-82
Identities = 79/93 (84%), Positives = 83/93 (89%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 KMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 97
K +LFQTYMPWFLTSTGY+YL +FLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL
Sbjct: 1220 KWNLFQTYMPWFLTSTGYRYLKFLFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 1279
Query: 96 QKKWCLPQWNLISEISSKCLHNFSV-EEMIHRN 1
QKK CLPQWNLISEISSK HN + EEM HRN
Sbjct: 1280 QKKLCLPQWNLISEISSKFFHNLLLSEEMSHRN 1312
>gb|AGK82956.1| hypothetical protein Ycf2 (chloroplast) [Lupinus luteus]
gi|485474372|gb|AGK82974.1| hypothetical protein Ycf2
(chloroplast) [Lupinus luteus]
Length = 2307
Score = 169 bits (427), Expect(2) = 4e-80
Identities = 84/101 (83%), Positives = 86/101 (85%)
Frame = -3
Query: 575 RAIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 396
RAIY IADISGTPLTEGQIVNF+RTYCQPLSDMNL DSEGKNLHQYLNFNSNMGLIHTPC
Sbjct: 1141 RAIYSIADISGTPLTEGQIVNFDRTYCQPLSDMNLPDSEGKNLHQYLNFNSNMGLIHTPC 1200
Query: 395 SEKYLPXXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLSK 273
SEKYLP C+EKGQMYRTFQRDSAFSTLSK
Sbjct: 1201 SEKYLPSEKRKKQSPCLKKCLEKGQMYRTFQRDSAFSTLSK 1241
Score = 155 bits (392), Expect(2) = 4e-80
Identities = 78/98 (79%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Frame = -2
Query: 291 FFNSLKMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDI 112
F + +LFQTY+PWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFV IFHDIMHGSDI
Sbjct: 1245 FQTYIPWNLFQTYIPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVFIFHDIMHGSDI 1304
Query: 111 SWRILQKKWCLPQWNLISEISSKCLHNFSV-EEMIHRN 1
SWRILQ QWNLISEISSKCLHN + EE+IHRN
Sbjct: 1305 SWRILQIPLWKTQWNLISEISSKCLHNLLLSEEIIHRN 1342
>gb|AFU96477.1| Ycf2, partial (chloroplast) [Schistostemon retusum]
Length = 2559
Score = 168 bits (425), Expect(2) = 6e-80
Identities = 88/101 (87%), Positives = 90/101 (89%), Gaps = 7/101 (6%)
Frame = -2
Query: 282 SLKMDLFQTYMPWFLTSTGYKYLNLIFLDTFSD-LLPILSSSQK-FVSIFHDIMHGSDIS 109
S K +LFQTYMPWFLTSTGYKYLNLIFLDTFSD LLPILSSSQK FVSIFHDIMHGSDIS
Sbjct: 1367 SXKWNLFQTYMPWFLTSTGYKYLNLIFLDTFSDXLLPILSSSQKXFVSIFHDIMHGSDIS 1426
Query: 108 WRILQKKWCLP--QWNLISEISSKCLHNFSV---EEMIHRN 1
WRILQKKWCLP QWNLISEISSKCLHN + EEMIHRN
Sbjct: 1427 WRILQKKWCLPXXQWNLISEISSKCLHNXXLLLSEEMIHRN 1467
Score = 155 bits (393), Expect(2) = 6e-80
Identities = 93/114 (81%), Positives = 93/114 (81%), Gaps = 12/114 (10%)
Frame = -3
Query: 575 RAIYLIADISGT--PLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN---FNSNMGL 411
RAIY IADISGT PLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN FNSNMGL
Sbjct: 1257 RAIYSIADISGTXXPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNXXXFNSNMGL 1316
Query: 410 IHTPCSEKYLP------XXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLS-KW 270
IHTPCSEKYLP CVEKGQMYRTFQRDSAFSTLS KW
Sbjct: 1317 IHTPCSEKYLPSEKRKXXXXXXKRSLCLKKCVEKGQMYRTFQRDSAFSTLSXKW 1370
>ref|YP_007890417.1| hypothetical chloroplast RF2 (chloroplast) [Ardisia polysticta]
gi|482651262|ref|YP_007890436.1| hypothetical chloroplast
RF2 (chloroplast) [Ardisia polysticta]
gi|456368014|gb|AGG36928.1| hypothetical chloroplast RF2
(chloroplast) [Ardisia polysticta]
gi|456368033|gb|AGG36947.1| hypothetical chloroplast RF2
(chloroplast) [Ardisia polysticta]
Length = 2294
Score = 172 bits (437), Expect(2) = 3e-79
Identities = 84/92 (91%), Positives = 86/92 (93%), Gaps = 1/92 (1%)
Frame = -2
Query: 276 KMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 97
K +LFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWR L
Sbjct: 1225 KWNLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRTL 1284
Query: 96 QKKWCLPQWNLISEISSKCLHNFSV-EEMIHR 4
QKK CLPQWNLISEISSKCLHN + EEMIHR
Sbjct: 1285 QKKLCLPQWNLISEISSKCLHNLLLSEEMIHR 1316
Score = 149 bits (375), Expect(2) = 3e-79
Identities = 78/101 (77%), Positives = 79/101 (78%)
Frame = -3
Query: 572 AIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPCS 393
AIY IADISGTPLTEGQIVNFERTY LSDMNLSDSEGKNLHQYLNFNSNM LIH PCS
Sbjct: 1128 AIYSIADISGTPLTEGQIVNFERTYS--LSDMNLSDSEGKNLHQYLNFNSNMDLIHIPCS 1185
Query: 392 EKYLPXXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLSKW 270
K+LP VEKGQM RTFQRDSAFSTLSKW
Sbjct: 1186 GKFLPSEKRKKRSLCLNKFVEKGQMDRTFQRDSAFSTLSKW 1226
>gb|AFU96449.1| Ycf2, partial (chloroplast) [Ctenolophon englerianus]
Length = 2559
Score = 163 bits (412), Expect(2) = 2e-78
Identities = 87/101 (86%), Positives = 89/101 (88%), Gaps = 7/101 (6%)
Frame = -2
Query: 282 SLKMDLFQTYMPWFLTSTGYKYLNLIFLDTFSD-LLPILSSSQK-FVSIFHDIMHGSDIS 109
S K +LFQTYMPWFLTSTGYKYLNLIFLDTFSD LLPILSSSQK FVSIFHDIMHGSDIS
Sbjct: 1367 SXKWNLFQTYMPWFLTSTGYKYLNLIFLDTFSDXLLPILSSSQKXFVSIFHDIMHGSDIS 1426
Query: 108 WRILQKKWCLP--QWNLISEISSKCLHNFSV---EEMIHRN 1
WRILQKK CLP QWNLISEISSKCLHN + EEMIHRN
Sbjct: 1427 WRILQKKLCLPXXQWNLISEISSKCLHNXXLLLSEEMIHRN 1467
Score = 155 bits (393), Expect(2) = 2e-78
Identities = 93/114 (81%), Positives = 93/114 (81%), Gaps = 12/114 (10%)
Frame = -3
Query: 575 RAIYLIADISGT--PLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN---FNSNMGL 411
RAIY IADISGT PLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN FNSNMGL
Sbjct: 1257 RAIYSIADISGTXXPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNXXXFNSNMGL 1316
Query: 410 IHTPCSEKYLP------XXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLS-KW 270
IHTPCSEKYLP CVEKGQMYRTFQRDSAFSTLS KW
Sbjct: 1317 IHTPCSEKYLPSEKRKXXXXXXKRSLCLKKCVEKGQMYRTFQRDSAFSTLSXKW 1370
>ref|YP_008145915.1| hypothetical chloroplast RF2 (chloroplast) [Glycine canescens]
gi|526176123|ref|YP_008145933.1| hypothetical chloroplast
RF2 (chloroplast) [Glycine canescens]
gi|514253188|gb|AGO44446.1| hypothetical chloroplast RF2
(chloroplast) [Glycine canescens]
gi|514253206|gb|AGO44464.1| hypothetical chloroplast RF2
(chloroplast) [Glycine canescens]
Length = 2287
Score = 165 bits (418), Expect(2) = 4e-78
Identities = 80/101 (79%), Positives = 85/101 (84%)
Frame = -3
Query: 572 AIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPCS 393
AIY IADISGTPLTEGQIV+FE+TYCQPLSDMN+ DSEGKNLHQYLNFNSNMGLIHTPCS
Sbjct: 1126 AIYSIADISGTPLTEGQIVHFEKTYCQPLSDMNIPDSEGKNLHQYLNFNSNMGLIHTPCS 1185
Query: 392 EKYLPXXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLSKW 270
EKYLP C+EKGQMYRTFQ+DS FSTLSKW
Sbjct: 1186 EKYLPCEKRKKRSPCLKKCLEKGQMYRTFQQDSVFSTLSKW 1226
Score = 152 bits (384), Expect(2) = 4e-78
Identities = 77/100 (77%), Positives = 81/100 (81%), Gaps = 8/100 (8%)
Frame = -2
Query: 276 KMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 97
K +LFQTY+PWFLTSTGYKYLN IFLDTFSDLLPILSSSQKFVSIFHDIMHGSDI WRI
Sbjct: 1225 KWNLFQTYIPWFLTSTGYKYLNFIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDILWRIR 1284
Query: 96 QKKWCLPQ-------WNLISEISSKCLHNFSV-EEMIHRN 1
Q CLPQ WNLISEI CLHNF + EE+IHRN
Sbjct: 1285 QIPLCLPQWNLISEIWNLISEIPGNCLHNFLLSEEIIHRN 1324
>gb|AFU96440.1| Ycf2, partial (chloroplast) [Balanops pachyphylla]
Length = 2559
Score = 161 bits (408), Expect(2) = 5e-78
Identities = 85/101 (84%), Positives = 89/101 (88%), Gaps = 7/101 (6%)
Frame = -2
Query: 282 SLKMDLFQTYMPWFLTSTGYKYLNLIFLDTFSD-LLPILSSSQK-FVSIFHDIMHGSDIS 109
S K +LFQTYMPWFLTSTGYKYLNLIFLDTFSD LLPILSSSQK FVSIFHDIMHGSDIS
Sbjct: 1367 SXKWNLFQTYMPWFLTSTGYKYLNLIFLDTFSDXLLPILSSSQKXFVSIFHDIMHGSDIS 1426
Query: 108 WRILQKKWCLP--QWNLISEISSKCLHNFSV---EEMIHRN 1
WRILQKK CLP QWNLISEIS+KCLHN + EEM+HRN
Sbjct: 1427 WRILQKKLCLPXXQWNLISEISNKCLHNXXLLLSEEMVHRN 1467
Score = 155 bits (393), Expect(2) = 5e-78
Identities = 93/114 (81%), Positives = 93/114 (81%), Gaps = 12/114 (10%)
Frame = -3
Query: 575 RAIYLIADISGT--PLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN---FNSNMGL 411
RAIY IADISGT PLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN FNSNMGL
Sbjct: 1257 RAIYSIADISGTXXPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNXXXFNSNMGL 1316
Query: 410 IHTPCSEKYLP------XXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLS-KW 270
IHTPCSEKYLP CVEKGQMYRTFQRDSAFSTLS KW
Sbjct: 1317 IHTPCSEKYLPSKKRKXXXXXXKRSLCLKKCVEKGQMYRTFQRDSAFSTLSXKW 1370
>gb|AFU96475.1| Ycf2, partial (chloroplast) [Quiina glaziovii]
Length = 2559
Score = 163 bits (412), Expect(2) = 3e-77
Identities = 87/101 (86%), Positives = 89/101 (88%), Gaps = 7/101 (6%)
Frame = -2
Query: 282 SLKMDLFQTYMPWFLTSTGYKYLNLIFLDTFSD-LLPILSSSQK-FVSIFHDIMHGSDIS 109
S K +LFQTYMPWFLTSTGYKYLNLIFLDTFSD LLPILSSSQK FVSIFHDIMHGSDIS
Sbjct: 1367 SXKWNLFQTYMPWFLTSTGYKYLNLIFLDTFSDXLLPILSSSQKXFVSIFHDIMHGSDIS 1426
Query: 108 WRILQKKWCLP--QWNLISEISSKCLHNFSV---EEMIHRN 1
WRILQKK CLP QWNLISEISSKCLHN + EEMIHRN
Sbjct: 1427 WRILQKKLCLPXXQWNLISEISSKCLHNXXLLLSEEMIHRN 1467
Score = 152 bits (383), Expect(2) = 3e-77
Identities = 92/114 (80%), Positives = 92/114 (80%), Gaps = 12/114 (10%)
Frame = -3
Query: 575 RAIYLIADISGT--PLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN---FNSNMGL 411
RAIY IADISGT PLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN FNSNMGL
Sbjct: 1257 RAIYSIADISGTXXPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNXXXFNSNMGL 1316
Query: 410 IHTPCSEKYLP------XXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLS-KW 270
IHTPCSEK LP CVEKGQMYRTFQRDSAFSTLS KW
Sbjct: 1317 IHTPCSEKDLPSEKRKXXXXXXKRSLCLKKCVEKGQMYRTFQRDSAFSTLSXKW 1370
>gb|AFU96466.1| Ycf2, partial (chloroplast) [Medusagyne oppositifolia]
Length = 2559
Score = 163 bits (412), Expect(2) = 3e-77
Identities = 87/101 (86%), Positives = 89/101 (88%), Gaps = 7/101 (6%)
Frame = -2
Query: 282 SLKMDLFQTYMPWFLTSTGYKYLNLIFLDTFSD-LLPILSSSQK-FVSIFHDIMHGSDIS 109
S K +LFQTYMPWFLTSTGYKYLNLIFLDTFSD LLPILSSSQK FVSIFHDIMHGSDIS
Sbjct: 1367 SXKWNLFQTYMPWFLTSTGYKYLNLIFLDTFSDXLLPILSSSQKXFVSIFHDIMHGSDIS 1426
Query: 108 WRILQKKWCLP--QWNLISEISSKCLHNFSV---EEMIHRN 1
WRILQKK CLP QWNLISEISSKCLHN + EEMIHRN
Sbjct: 1427 WRILQKKLCLPXXQWNLISEISSKCLHNXXLLLSEEMIHRN 1467
Score = 152 bits (383), Expect(2) = 3e-77
Identities = 92/114 (80%), Positives = 92/114 (80%), Gaps = 12/114 (10%)
Frame = -3
Query: 575 RAIYLIADISGT--PLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN---FNSNMGL 411
RAIY IADISGT PLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN FNSNMGL
Sbjct: 1257 RAIYSIADISGTXXPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNXXXFNSNMGL 1316
Query: 410 IHTPCSEKYLP------XXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLS-KW 270
IHTPCSEK LP CVEKGQMYRTFQRDSAFSTLS KW
Sbjct: 1317 IHTPCSEKDLPSEKRKXXXXXXKRSLCLKKCVEKGQMYRTFQRDSAFSTLSXKW 1370
>gb|AFU96467.1| Ycf2, partial (chloroplast) [Microdesmis caseariifolia]
Length = 2559
Score = 160 bits (406), Expect(2) = 3e-77
Identities = 86/101 (85%), Positives = 88/101 (87%), Gaps = 7/101 (6%)
Frame = -2
Query: 282 SLKMDLFQTYMPWFLTSTGYKYLNLIFLDTFSD-LLPILSSSQK-FVSIFHDIMHGSDIS 109
S K +LFQTYMPWFLTSTGYKYLNLIFLDT SD LLPILSSSQK FVSIFHDIMHGSDIS
Sbjct: 1367 SXKWNLFQTYMPWFLTSTGYKYLNLIFLDTLSDXLLPILSSSQKXFVSIFHDIMHGSDIS 1426
Query: 108 WRILQKKWCLP--QWNLISEISSKCLHNFSV---EEMIHRN 1
WRILQKK CLP QWNLISEISSKCLHN + EEMIHRN
Sbjct: 1427 WRILQKKLCLPXXQWNLISEISSKCLHNXXLLLSEEMIHRN 1467
Score = 154 bits (389), Expect(2) = 3e-77
Identities = 92/114 (80%), Positives = 93/114 (81%), Gaps = 12/114 (10%)
Frame = -3
Query: 575 RAIYLIADISGT--PLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN---FNSNMGL 411
RAIY IADISGT PLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN FNSNMGL
Sbjct: 1257 RAIYSIADISGTXXPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNXXXFNSNMGL 1316
Query: 410 IHTPCSEKYLP------XXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLS-KW 270
IHTPCSEKYLP CVEKG+MYRTFQRDSAFSTLS KW
Sbjct: 1317 IHTPCSEKYLPSEKRKXXXXXXKRSLCLKKCVEKGRMYRTFQRDSAFSTLSXKW 1370
>ref|YP_740694.1| hypothetical chloroplast RF2 [Nandina domestica]
gi|114330032|ref|YP_740713.1| hypothetical chloroplast
RF2 [Nandina domestica]
gi|122165906|sp|Q09FP8.1|YCF2_NANDO RecName: Full=Protein
ycf2 gi|114054515|gb|ABI49908.1| hypothetical chloroplast
RF2 [Nandina domestica] gi|114054534|gb|ABI49927.1|
hypothetical chloroplast RF2 [Nandina domestica]
Length = 2299
Score = 162 bits (411), Expect(2) = 4e-77
Identities = 81/102 (79%), Positives = 82/102 (80%)
Frame = -3
Query: 575 RAIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 396
RA+Y IADISGTPLTEGQIVNFERTYCQPLSDMN SDSEGKNLHQYLNFNSNMGLIH PC
Sbjct: 1128 RALYSIADISGTPLTEGQIVNFERTYCQPLSDMNPSDSEGKNLHQYLNFNSNMGLIHIPC 1187
Query: 395 SEKYLPXXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLSKW 270
SEKYLP CVEK QMYR FQRDSAFS SKW
Sbjct: 1188 SEKYLPSEKRKKRSLCLKKCVEKRQMYRPFQRDSAFSNFSKW 1229
Score = 151 bits (382), Expect(2) = 4e-77
Identities = 80/100 (80%), Positives = 82/100 (82%), Gaps = 3/100 (3%)
Frame = -2
Query: 291 FFNSLKMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDI 112
F N K +LFQTYMPWFLTSTG KYLN LDTFSDLLPILSSSQ FVSIFHDIMHGSDI
Sbjct: 1223 FSNFSKWNLFQTYMPWFLTSTGCKYLNFTLLDTFSDLLPILSSSQNFVSIFHDIMHGSDI 1282
Query: 111 SWRILQKK-W-CLPQWNLISEISSKCLHNFSV-EEMIHRN 1
SW I QKK W LPQWNLISEISSKCLHN + EEMI RN
Sbjct: 1283 SWPIPQKKLWVILPQWNLISEISSKCLHNLLLSEEMIRRN 1322
>gb|AFU96439.1| Ycf2, partial (chloroplast) [Averrhoa carambola]
Length = 2559
Score = 161 bits (407), Expect(2) = 4e-77
Identities = 86/101 (85%), Positives = 88/101 (87%), Gaps = 7/101 (6%)
Frame = -2
Query: 282 SLKMDLFQTYMPWFLTSTGYKYLNLIFLDTFSD-LLPILSSSQK-FVSIFHDIMHGSDIS 109
S K +LFQTYMPWFLTSTGYKYLNLIFLDTFSD LLPILSSSQK FVS FHDIMHGSDIS
Sbjct: 1367 SXKWNLFQTYMPWFLTSTGYKYLNLIFLDTFSDXLLPILSSSQKXFVSTFHDIMHGSDIS 1426
Query: 108 WRILQKKWCLP--QWNLISEISSKCLHNFSV---EEMIHRN 1
WRILQKK CLP QWNLISEISSKCLHN + EEMIHRN
Sbjct: 1427 WRILQKKLCLPXXQWNLISEISSKCLHNXXLLLSEEMIHRN 1467
Score = 153 bits (386), Expect(2) = 4e-77
Identities = 92/114 (80%), Positives = 92/114 (80%), Gaps = 12/114 (10%)
Frame = -3
Query: 575 RAIYLIADISGTPL--TEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN---FNSNMGL 411
RAIY IADISGTPL TEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLN FNSNMGL
Sbjct: 1257 RAIYSIADISGTPLPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNXXXFNSNMGL 1316
Query: 410 IHTPCSEKYLP------XXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLS-KW 270
IHTPCSEKYLP CVEKGQMYRTFQ DSAFSTLS KW
Sbjct: 1317 IHTPCSEKYLPSEKRKXXXXXXKRSLCLKKCVEKGQMYRTFQGDSAFSTLSXKW 1370
>ref|YP_005088849.1| Ycf2 (chloroplast) [Millettia pinnata]
gi|374249596|ref|YP_005088866.1| Ycf2 (chloroplast)
[Millettia pinnata] gi|356474868|gb|AET11386.1| Ycf2
(chloroplast) [Millettia pinnata]
gi|356474885|gb|AET11402.1| Ycf2 (chloroplast) [Millettia
pinnata]
Length = 2285
Score = 173 bits (438), Expect(2) = 5e-77
Identities = 85/102 (83%), Positives = 87/102 (85%)
Frame = -3
Query: 575 RAIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 396
RAIYLIADISGTPL EGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC
Sbjct: 1122 RAIYLIADISGTPLPEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 1181
Query: 395 SEKYLPXXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLSKW 270
S+KYLP C+EKG MYRTFQRDSAFSTLSKW
Sbjct: 1182 SDKYLPSEKRKKWSPCPKKCLEKGHMYRTFQRDSAFSTLSKW 1223
Score = 140 bits (354), Expect(2) = 5e-77
Identities = 73/99 (73%), Positives = 78/99 (78%), Gaps = 8/99 (8%)
Frame = -2
Query: 276 KMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 97
K +LFQTY+PWFLTSTGYKYLN IFLDTFSDLLPILSSSQKFVSIFHDIMH SDIS+
Sbjct: 1222 KWNLFQTYIPWFLTSTGYKYLNFIFLDTFSDLLPILSSSQKFVSIFHDIMHRSDISYLTY 1281
Query: 96 QKKWCLPQ-------WNLISEISSKCLHN-FSVEEMIHR 4
+ CLPQ WNLISEI S CLHN F EE+IHR
Sbjct: 1282 RISLCLPQGNLISKIWNLISEIPSNCLHNLFLSEEIIHR 1320
>gb|AEK71423.1| hypothetical chloroplast RF2 [Albizia julibrissin]
Length = 2249
Score = 176 bits (446), Expect(2) = 1e-76
Identities = 86/102 (84%), Positives = 87/102 (85%)
Frame = -3
Query: 575 RAIYLIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 396
RAIY IADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC
Sbjct: 1112 RAIYSIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNLHQYLNFNSNMGLIHTPC 1171
Query: 395 SEKYLPXXXXXXXXXXXXXCVEKGQMYRTFQRDSAFSTLSKW 270
SEKYLP +EKGQMYRTFQRDSAFSTLSKW
Sbjct: 1172 SEKYLPSEKRKKRSLRLKKWLEKGQMYRTFQRDSAFSTLSKW 1213
Score = 136 bits (343), Expect(2) = 1e-76
Identities = 71/93 (76%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 KMDLFQTYMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRIL 97
K +LFQTY+PWFLTSTGYKYLN +FLD LPI QKFVSIFHDIMH SDISWRIL
Sbjct: 1212 KWNLFQTYIPWFLTSTGYKYLNFLFLDX----LPI----QKFVSIFHDIMHRSDISWRIL 1263
Query: 96 QKKWCLPQWNLISEISSKCLHNFSV-EEMIHRN 1
QKK LPQWNLISEISSKCLHN + EE+IHRN
Sbjct: 1264 QKKLYLPQWNLISEISSKCLHNLLLSEEIIHRN 1296