BLASTX nr result
ID: Jatropha_contig00001942
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00001942
(566 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI39039.3| unnamed protein product [Vitis vinifera] 67 3e-09
ref|YP_001152142.1| ORF55b [Pinus koraiensis] gi|145048771|gb|AB... 67 4e-09
ref|XP_002888381.1| expressed protein [Arabidopsis lyrata subsp.... 60 2e-08
ref|YP_008145821.1| cytochrome b6 (chloroplast) [Glycine stenoph... 64 3e-08
ref|YP_008145373.1| cytochrome b6 (chloroplast) [Glycine tomente... 64 3e-08
ref|YP_538795.1| cytochrome b6 [Glycine max] gi|526175922|ref|YP... 64 3e-08
gb|AAZ04011.1| cytochrome b6 [Nuphar advena] 64 3e-08
ref|YP_053184.1| cytochrome b6 [Nymphaea alba] gi|61212577|sp|Q6... 64 3e-08
gb|AFU96011.1| PetB, partial (chloroplast) [Trigonia sp. CCD-2012] 64 3e-08
gb|AFU95974.1| PetB, partial (chloroplast) [Casearia nitida] 64 3e-08
gb|AEP94890.1| cytochrome b6 [Vigna unguiculata] 64 3e-08
ref|YP_005097904.1| cytochrome b6 (chloroplast) [Colocasia escul... 64 3e-08
gb|ADD31092.1| cytochrome b6 protein [Gunnera manicata] 64 3e-08
ref|YP_002720142.1| petB [Jatropha curcas] gi|326909422|ref|YP_0... 64 3e-08
ref|YP_002456455.1| cytochrome b6 [Trifolium subterraneum] gi|19... 64 3e-08
ref|YP_001122836.2| cytochrome b6 [Phaseolus vulgaris] gi|289066... 64 3e-08
ref|YP_001001564.1| cytochrome b6 [Nuphar advena] gi|84682234|gb... 64 3e-08
ref|YP_784503.1| cytochrome b6 [Piper cenocladum] gi|122164332|s... 64 3e-08
ref|NP_084827.1| cytochrome b6 [Lotus japonicus] gi|23813953|sp|... 64 3e-08
gb|AFU96007.1| PetB, partial (chloroplast) [Quiina glaziovii] 62 7e-08
>emb|CBI39039.3| unnamed protein product [Vitis vinifera]
Length = 199
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = -2
Query: 124 IIYILYKGPEIPCLRIIEKCININTAVRRGNTK 26
+IY+LYKGPEIPCLRII KCININTAVRRGNTK
Sbjct: 1 MIYLLYKGPEIPCLRIIGKCININTAVRRGNTK 33
>ref|YP_001152142.1| ORF55b [Pinus koraiensis] gi|145048771|gb|ABP35389.1| ORF55b [Pinus
koraiensis]
Length = 55
Score = 66.6 bits (161), Expect = 4e-09
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = -2
Query: 121 IYILYKGPEIPCLRIIEKCININTAVRRGNTKVCK 17
I+ LYKGPEIPCLRII+KCI INTAVRRGN KVCK
Sbjct: 20 IFPLYKGPEIPCLRIIKKCIGINTAVRRGNMKVCK 54
>ref|XP_002888381.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
gi|297334222|gb|EFH64640.1| expressed protein
[Arabidopsis lyrata subsp. lyrata]
Length = 50
Score = 60.5 bits (145), Expect(2) = 2e-08
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -3
Query: 462 DHRKDSLQANQPILCMGLSQWLEQRHIWL 376
DHRKDSL+ NQPI CMGL+QWLEQRHIWL
Sbjct: 22 DHRKDSLKVNQPIPCMGLTQWLEQRHIWL 50
Score = 23.9 bits (50), Expect(2) = 2e-08
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 517 HHLFYWVLRSLFMH 476
H L YW+LRS +H
Sbjct: 3 HPLIYWILRSPLIH 16
>ref|YP_008145821.1| cytochrome b6 (chloroplast) [Glycine stenophita]
gi|514253093|gb|AGO44352.1| cytochrome b6 (chloroplast)
[Glycine stenophita]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 184 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 215
>ref|YP_008145373.1| cytochrome b6 (chloroplast) [Glycine tomentella]
gi|526176093|ref|YP_008145903.1| cytochrome b6
(chloroplast) [Glycine canescens]
gi|526176180|ref|YP_008145985.1| cytochrome b6
(chloroplast) [Glycine dolichocarpa]
gi|526176267|ref|YP_008146067.1| cytochrome b6
(chloroplast) [Glycine falcata]
gi|526176361|ref|YP_008146149.1| cytochrome b6
(chloroplast) [Glycine syndetika]
gi|514253010|gb|AGO44270.1| cytochrome b6 (chloroplast)
[Glycine tomentella] gi|514253176|gb|AGO44434.1|
cytochrome b6 (chloroplast) [Glycine canescens]
gi|514253259|gb|AGO44516.1| cytochrome b6 (chloroplast)
[Glycine dolichocarpa] gi|514253342|gb|AGO44598.1|
cytochrome b6 (chloroplast) [Glycine falcata]
gi|514253425|gb|AGO44680.1| cytochrome b6 (chloroplast)
[Glycine syndetika] gi|514253506|gb|AGO44760.1|
cytochrome b6 (chloroplast) [Glycine tomentella]
gi|514253584|gb|AGO44837.1| cytochrome b6 (chloroplast)
[Glycine tomentella]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 184 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 215
>ref|YP_538795.1| cytochrome b6 [Glycine max] gi|526175922|ref|YP_008145740.1|
cytochrome b6 (chloroplast) [Glycine cyrtoloba]
gi|558604166|ref|YP_008816276.1| cytochrome b6
(chloroplast) [Glycine soja]
gi|122202480|sp|Q2PMQ5.1|CYB6_SOYBN RecName:
Full=Cytochrome b6 gi|83595772|gb|ABC25153.1| cytochrome
b6 [Glycine max] gi|514252928|gb|AGO44189.1| cytochrome
b6 (chloroplast) [Glycine cyrtoloba]
gi|557469758|gb|AHA04011.1| cytochrome b6 (chloroplast)
[Glycine soja]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 184 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 215
>gb|AAZ04011.1| cytochrome b6 [Nuphar advena]
Length = 213
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 182 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 213
>ref|YP_053184.1| cytochrome b6 [Nymphaea alba] gi|61212577|sp|Q6EW22.1|CYB6_NYMAL
RecName: Full=Cytochrome b6 gi|50250358|emb|CAF28624.1|
cytochrome B6 [Nymphaea alba]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 184 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 215
>gb|AFU96011.1| PetB, partial (chloroplast) [Trigonia sp. CCD-2012]
Length = 213
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 182 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 213
>gb|AFU95974.1| PetB, partial (chloroplast) [Casearia nitida]
Length = 213
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 182 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 213
>gb|AEP94890.1| cytochrome b6 [Vigna unguiculata]
Length = 216
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 185 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 216
>ref|YP_005097904.1| cytochrome b6 (chloroplast) [Colocasia esculenta]
gi|340536670|gb|AEK48437.1| cytochrome b6 (chloroplast)
[Colocasia esculenta] gi|340536757|gb|AEK48523.1|
cytochrome b6 (chloroplast) [Colocasia esculenta]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 184 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 215
>gb|ADD31092.1| cytochrome b6 protein [Gunnera manicata]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 184 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 215
>ref|YP_002720142.1| petB [Jatropha curcas] gi|326909422|ref|YP_004327692.1| cytochrome
b6 [Hevea brasiliensis] gi|511348366|ref|YP_008081295.1|
cytochrome b6 (chloroplast) [Catharanthus roseus]
gi|224979594|gb|ACN72721.1| petB [Jatropha curcas]
gi|308523536|gb|ADO33586.1| cytochrome b6 [Hevea
brasiliensis] gi|474452106|gb|AGI51174.1| cytochrome b6
(chloroplast) [Catharanthus roseus]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 184 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 215
>ref|YP_002456455.1| cytochrome b6 [Trifolium subterraneum] gi|193788939|gb|ACF20535.1|
cytochrome b6 [Trifolium subterraneum]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 184 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 215
>ref|YP_001122836.2| cytochrome b6 [Phaseolus vulgaris] gi|289066856|ref|YP_003434374.1|
cytochrome b6 [Vigna radiata]
gi|393396132|ref|YP_006460372.1| cytochrome b6
(chloroplast) [Vigna unguiculata]
gi|501594962|ref|YP_007889754.1| cytochrome b6
(chloroplast) [Vigna angularis]
gi|145203175|gb|ABH88115.2| cytochrome b6 [Phaseolus
vulgaris] gi|158187121|gb|ABW22754.1| cytochrome b6
[Phaseolus vulgaris] gi|259020043|gb|ACV90241.1|
cytochrome b6 [Vigna radiata]
gi|387598496|gb|AFJ91888.1| cytochrome b6 (chloroplast)
[Vigna unguiculata] gi|478620911|dbj|BAN14958.1|
cytochrome b6 (chloroplast) [Vigna angularis]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 184 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 215
>ref|YP_001001564.1| cytochrome b6 [Nuphar advena] gi|84682234|gb|ABC60488.1| cytochrome
b6 [Nuphar advena]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 184 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 215
>ref|YP_784503.1| cytochrome b6 [Piper cenocladum]
gi|122164332|sp|Q06GN0.1|CYB6_PIPCE RecName:
Full=Cytochrome b6 gi|112253780|gb|ABI14501.1|
cytochrome b6 [Piper cenocladum]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 184 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 215
>ref|NP_084827.1| cytochrome b6 [Lotus japonicus] gi|23813953|sp|Q9BBQ6.1|CYB6_LOTJA
RecName: Full=Cytochrome b6 gi|13359009|dbj|BAB33226.1|
cytochrome B6 [Lotus japonicus]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLTAVFMLMHFSMIRKQGISGPL
Sbjct: 184 YSLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 215
>gb|AFU96007.1| PetB, partial (chloroplast) [Quiina glaziovii]
Length = 213
Score = 62.4 bits (150), Expect = 7e-08
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +3
Query: 12 FYLHTFVLPLLTAVFMLMHFSMIRKQGISGPL 107
+ LHTFVLPLLT+VFMLMHFSMIRKQGISGPL
Sbjct: 182 YSLHTFVLPLLTSVFMLMHFSMIRKQGISGPL 213