BLASTX nr result

ID: Jatropha_contig00001915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00001915
         (444 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514277.1| conserved hypothetical protein [Ricinus comm...    50   9e-07
gb|EOY30745.1| RNA-binding protein-related [Theobroma cacao]           49   9e-06

>ref|XP_002514277.1| conserved hypothetical protein [Ricinus communis]
           gi|223546733|gb|EEF48231.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 346

 Score = 50.4 bits (119), Expect(2) = 9e-07
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -1

Query: 213 GAGSDYEPDVVRRDPPPYSRQDRYSD 136
           G GSDYEP  VRR+PPPYSR DRYSD
Sbjct: 39  GGGSDYEPGEVRREPPPYSRSDRYSD 64



 Score = 27.7 bits (60), Expect(2) = 9e-07
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 296 MGSRVKDQMTSHHSRYLAA 240
           MGSR KDQ TSHH   L++
Sbjct: 1   MGSRDKDQTTSHHQPLLSS 19


>gb|EOY30745.1| RNA-binding protein-related [Theobroma cacao]
          Length = 373

 Score = 49.3 bits (116), Expect(2) = 9e-06
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = -1

Query: 213 GAGSDYEPDVVRRDPPPYSRQDRYSD 136
           G GSDYEP  VRR+PPPYSR DRY+D
Sbjct: 41  GGGSDYEPGEVRREPPPYSRSDRYND 66



 Score = 25.4 bits (54), Expect(2) = 9e-06
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 296 MGSRVKDQMTSHHSRYLAA 240
           MGSR KDQ  SHH   L++
Sbjct: 1   MGSRDKDQKLSHHQPLLSS 19


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