BLASTX nr result
ID: Jatropha_contig00001898
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00001898
(428 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002720113.1| ycf3 [Jatropha curcas] gi|224979566|gb|ACN72... 89 4e-16
ref|YP_005090179.1| ycf3 gene product (chloroplast) [Ricinus com... 87 2e-15
gb|AEZ48760.1| photosystem I assembly protein Ycf3, partial [Cen... 86 5e-15
ref|YP_538849.1| photosystem I assembly protein Ycf3 [Solanum bu... 86 6e-15
ref|YP_008592640.1| photosystem I assembly protein ycf3 (chlorop... 85 8e-15
gb|AFB70727.1| photosystem I assembly protein Ycf3, partial (chl... 85 8e-15
ref|YP_004327663.1| photosystem I assembly protein ycf3 [Hevea b... 85 8e-15
gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rume... 85 1e-14
gb|AEY84145.1| hypothetical chloroplast RF34 (chloroplast) [Vacc... 85 1e-14
gb|AAZ03964.1| Ycf3 [Ranunculus macranthus] 85 1e-14
ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrom... 85 1e-14
gb|AGJ51257.1| photosystem I assembly protein Ycf3 (chloroplast)... 84 1e-14
gb|ADD30856.1| putative RF3 protein [Dillenia indica] 84 1e-14
ref|YP_778493.1| photosystem I assembly protein Ycf3 [Jasminum n... 84 1e-14
ref|YP_008082582.1| hypothetical chloroplast RF34 (chloroplast) ... 84 2e-14
gb|AFR25661.1| hypothetical chloroplast RF34 (chloroplast) [Pent... 84 2e-14
gb|AFK81300.1| hypothetical chloroplast RF34 [Camellia sinensis ... 84 2e-14
gb|AGK82919.1| photosystem I assembly protein Ycf3 (chloroplast)... 84 2e-14
ref|YP_008814857.1| hypothetical chloroplast RF21 (chloroplast) ... 84 2e-14
gb|AGW96677.1| hypothetical chloroplast RF34 (chloroplast) [Argy... 84 2e-14
>ref|YP_002720113.1| ycf3 [Jatropha curcas] gi|224979566|gb|ACN72693.1| ycf3 [Jatropha
curcas]
Length = 168
Score = 89.4 bits (220), Expect = 4e-16
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVM 44
>ref|YP_005090179.1| ycf3 gene product (chloroplast) [Ricinus communis]
gi|339516166|gb|AEJ82556.1| photosystem I assembly
protein Ycf3 [Ricinus communis]
Length = 169
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSR TGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRITGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVM 44
>gb|AEZ48760.1| photosystem I assembly protein Ycf3, partial [Centrolepis monogyna]
Length = 169
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSRT GNFIDKTFSIVANILLRIIPTTSGEK+AFTYYRDGV+
Sbjct: 1 MPRSRTNGNFIDKTFSIVANILLRIIPTTSGEKKAFTYYRDGVM 44
>ref|YP_538849.1| photosystem I assembly protein Ycf3 [Solanum bulbocastanum]
gi|122232537|sp|Q2MII6.1|YCF3_SOLBU RecName:
Full=Photosystem I assembly protein ycf3
gi|84371896|gb|ABC56214.1| photosystem I assembly
protein ycf3 [Solanum bulbocastanum]
Length = 168
Score = 85.5 bits (210), Expect = 6e-15
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 387
MPRSRT GNFIDKTFSIVANILLR+IPTTSGEKEAFTYYRDG+
Sbjct: 1 MPRSRTNGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDGM 43
>ref|YP_008592640.1| photosystem I assembly protein ycf3 (chloroplast) [Berberis bealei]
gi|536462681|gb|AGU37046.1| photosystem I assembly
protein ycf3 (chloroplast) [Berberis bealei]
Length = 169
Score = 85.1 bits (209), Expect = 8e-15
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSR GNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVM 44
>gb|AFB70727.1| photosystem I assembly protein Ycf3, partial (chloroplast) [Mollugo
verticillata]
Length = 217
Score = 85.1 bits (209), Expect = 8e-15
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSR GNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVM 44
>ref|YP_004327663.1| photosystem I assembly protein ycf3 [Hevea brasiliensis]
gi|308523508|gb|ADO33558.1| photosystem I assembly
protein ycf3 [Hevea brasiliensis]
Length = 168
Score = 85.1 bits (209), Expect = 8e-15
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 387
MPRSR TGNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1 MPRSRITGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGM 43
>gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rumex acetosa]
Length = 169
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSR GNFIDKTFS+VANILLRIIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRINGNFIDKTFSVVANILLRIIPTTSGEKEAFTYYRDGVM 44
>gb|AEY84145.1| hypothetical chloroplast RF34 (chloroplast) [Vaccinium macrocarpon]
Length = 170
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSR GNFID+TFSI+ANILLRIIPTTSGEKEAFTYYRDGVI
Sbjct: 1 MPRSRMNGNFIDRTFSIIANILLRIIPTTSGEKEAFTYYRDGVI 44
>gb|AAZ03964.1| Ycf3 [Ranunculus macranthus]
Length = 170
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSR GNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG I
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 44
>ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrometrica]
gi|340549408|gb|AEK53230.1| hypothetical chloroplast
RF34 (chloroplast) [Boea hygrometrica]
Length = 171
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSR GNFIDKTFSIVANILL+IIPTTSGEKEAFTYYRDGVI
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKEAFTYYRDGVI 44
>gb|AGJ51257.1| photosystem I assembly protein Ycf3 (chloroplast) [Solanum
carolinense]
Length = 44
Score = 84.3 bits (207), Expect = 1e-14
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSR GNFIDKTFSIVANILLR+IPTTSGEKEAFTYYRDG I
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDGAI 44
>gb|ADD30856.1| putative RF3 protein [Dillenia indica]
Length = 168
Score = 84.3 bits (207), Expect = 1e-14
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSR GNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG++
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGML 44
>ref|YP_778493.1| photosystem I assembly protein Ycf3 [Jasminum nudiflorum]
gi|122164970|sp|Q06RC8.1|YCF3_JASNU RecName:
Full=Photosystem I assembly protein ycf3
gi|110456226|gb|ABG74631.1| YCF3 protein [Jasminum
nudiflorum]
Length = 168
Score = 84.3 bits (207), Expect = 1e-14
Identities = 40/43 (93%), Positives = 41/43 (95%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 387
MPRSR GNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGI 43
>ref|YP_008082582.1| hypothetical chloroplast RF34 (chloroplast) [Utricularia gibba]
gi|498921855|gb|AGL61076.1| hypothetical chloroplast
RF34 (chloroplast) [Utricularia gibba]
Length = 169
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSR GNFIDKTFSIVANILL+IIPTTSGEKEAFTYYRDGV+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLKIIPTTSGEKEAFTYYRDGVM 44
>gb|AFR25661.1| hypothetical chloroplast RF34 (chloroplast) [Penthorum chinense]
Length = 169
Score = 83.6 bits (205), Expect = 2e-14
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVI 390
MPRSR GNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAM 44
>gb|AFK81300.1| hypothetical chloroplast RF34 [Camellia sinensis var. assamica]
Length = 168
Score = 83.6 bits (205), Expect = 2e-14
Identities = 40/43 (93%), Positives = 41/43 (95%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 387
MPRSR GNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43
>gb|AGK82919.1| photosystem I assembly protein Ycf3 (chloroplast) [Lupinus luteus]
Length = 168
Score = 83.6 bits (205), Expect = 2e-14
Identities = 40/43 (93%), Positives = 41/43 (95%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 387
MPRSR GNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43
>ref|YP_008814857.1| hypothetical chloroplast RF21 (chloroplast) [Aralia undulata]
gi|458599091|gb|AGG38957.1| hypothetical chloroplast
RF21 (chloroplast) [Aralia undulata]
Length = 168
Score = 83.6 bits (205), Expect = 2e-14
Identities = 40/43 (93%), Positives = 41/43 (95%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 387
MPRSR GNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGM 43
>gb|AGW96677.1| hypothetical chloroplast RF34 (chloroplast) [Argyreia nervosa]
Length = 168
Score = 83.6 bits (205), Expect = 2e-14
Identities = 40/43 (93%), Positives = 41/43 (95%)
Frame = +1
Query: 259 MPRSRTTGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGV 387
MPRSR GNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG+
Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGL 43