BLASTX nr result

ID: Jatropha_contig00001896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00001896
         (512 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ04885.1| hypothetical protein PRUPE_ppa026192mg [Prunus pe...   251   5e-65
emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]   247   9e-64
ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containi...   247   1e-63
emb|CBI38358.3| unnamed protein product [Vitis vinifera]              247   1e-63
ref|XP_003611862.1| Pentatricopeptide repeat-containing protein ...   231   7e-59
gb|ESW28860.1| hypothetical protein PHAVU_002G024100g [Phaseolus...   231   9e-59
ref|XP_004301874.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-58
ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containi...   224   6e-57
ref|XP_004959653.1| PREDICTED: pentatricopeptide repeat-containi...   210   2e-52
ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [S...   210   2e-52
gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indi...   209   2e-52
ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group] g...   208   5e-52
ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea ma...   206   3e-51
ref|XP_002875497.1| pentatricopeptide repeat-containing protein ...   204   7e-51
ref|XP_006290777.1| hypothetical protein CARUB_v10016882mg [Caps...   203   2e-50
gb|EMT03504.1| Pentatricopeptide repeat-containing protein [Aegi...   202   5e-50
dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]    201   6e-50
ref|XP_004984117.1| PREDICTED: pentatricopeptide repeat-containi...   198   5e-49
ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containi...   197   1e-48
ref|NP_189568.1| pentatricopeptide repeat-containing protein [Ar...   196   2e-48

>gb|EMJ04885.1| hypothetical protein PRUPE_ppa026192mg [Prunus persica]
          Length = 559

 Score =  251 bits (642), Expect = 5e-65
 Identities = 120/170 (70%), Positives = 146/170 (85%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           A+G+A+D+F ++P KN+VSW  IIGALALHGCG EAI++F++MQA GI PDEITFT LLS
Sbjct: 317 AVGIAMDLFTQIPEKNVVSWNVIIGALALHGCGFEAIRIFKQMQAGGIWPDEITFTGLLS 376

Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
           ACSH GL+D+GR YF +M S+Y I  EIEHYACMVDLLGRGG L+EA+ L+ GMPMKPDI
Sbjct: 377 ACSHSGLLDMGRYYFERMESIYRISPEIEHYACMVDLLGRGGFLEEAIRLLIGMPMKPDI 436

Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           VIWGALLGACR HG+V +GKQILKQLLEL+  GSG+YVLLSN++ +A +W
Sbjct: 437 VIWGALLGACRIHGNVDLGKQILKQLLELEGHGSGLYVLLSNIFGEAHRW 486



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A + F++MP KN+VSW ++I      G    A+ LF++M   G  PDE T   +LSACS 
Sbjct: 220 AQEFFDQMPLKNVVSWNSMISYYVREGQCRAALDLFQRMLNSGALPDEATLVFILSACSQ 279

Query: 195 CGLVDIG-RDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIW 371
            G + IG + + Y   S   +   +  +  ++D+  + G +  AM L   +P K ++V W
Sbjct: 280 IGDLVIGKKTHSYICNS--NVTPSVTLFNSLIDMYAKCGAVGIAMDLFTQIPEK-NVVSW 336

Query: 372 GALLGACRTHG----DVRIGKQI 428
             ++GA   HG     +RI KQ+
Sbjct: 337 NVIIGALALHGCGFEAIRIFKQM 359



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 42/142 (29%), Positives = 71/142 (50%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A ++F+ M  ++LVSW ++IG  A  G    A  LF  M+  G+ PD+ T   LLS CS 
Sbjct: 88  ARNVFDDMSERSLVSWNSMIGGYARMGSCKGAFLLFRGMRDFGVGPDKFTLVNLLSVCSQ 147

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
              +++GR Y +    V GI  +      ++D+  + G L  A  +   M  K ++V W 
Sbjct: 148 SCDLELGR-YVHLYIEVSGIEVDQILRNALLDMYAKCGHLHLAQTIFYRMTHK-NVVSWT 205

Query: 375 ALLGACRTHGDVRIGKQILKQL 440
           +++ A   HG +   ++   Q+
Sbjct: 206 SMVSAYAKHGLIEFAQEFFDQM 227


>emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
          Length = 688

 Score =  247 bits (631), Expect = 9e-64
 Identities = 119/166 (71%), Positives = 138/166 (83%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A+DIF +MP KNLVSW  IIGALALHGCGLEAIKLFE+MQA+G  PDEIT T LLSACSH
Sbjct: 447 ALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSH 506

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GLVD+G  YF +M  +Y +  EIEHYACMVDLLGRGG L EA+ LI  MPMKPD+V+WG
Sbjct: 507 SGLVDMGLYYFDRMGVIYRVXREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWG 566

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           ALLGACR HG+V IGKQILKQLLEL+P   G+YVL+SN+Y++A +W
Sbjct: 567 ALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRW 612



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           ++ +A  IF++MP KN+VSW ++I      G   EA+ LF KM+   + PDE T   +L+
Sbjct: 342 SIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILA 401

Query: 183 ACSHCGLVDIGR---DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMK 353
           ACS  G + +G+   +Y    +  YG+      Y  ++D+  + G +  A+ +   MP K
Sbjct: 402 ACSQLGDLVMGKKIHNYILSNKGAYGVT----LYNSLIDMYAKCGPVVTALDIFLEMPGK 457

Query: 354 PDIVIWGALLGACRTHGDVRIGKQILKQLLELKPSGS 464
            ++V W  ++GA   HG    G + +K   E++  G+
Sbjct: 458 -NLVSWNVIIGALALHG---CGLEAIKLFEEMQADGT 490


>ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 616

 Score =  247 bits (630), Expect = 1e-63
 Identities = 119/166 (71%), Positives = 138/166 (83%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A+DIF +MP KNLVSW  IIGALALHGCGLEAIKLFE+MQA+G  PDEIT T LLSACSH
Sbjct: 375 ALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSH 434

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GLVD+G  YF +M  +Y +  EIEHYACMVDLLGRGG L EA+ LI  MPMKPD+V+WG
Sbjct: 435 SGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWG 494

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           ALLGACR HG+V IGKQILKQLLEL+P   G+YVL+SN+Y++A +W
Sbjct: 495 ALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRW 540



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           ++ +A  IF++MP KN+VSW ++I      G   EA+ LF KM+   + PDE T   +L+
Sbjct: 270 SIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILA 329

Query: 183 ACSHCGLVDIGR---DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMK 353
           ACS  G + +G+   +Y    +  YG+      Y  ++D+  + G +  A+ +   MP K
Sbjct: 330 ACSQLGDLVMGKKIHNYILSNKGAYGVT----LYNSLIDMYAKCGPVVTALDIFLEMPGK 385

Query: 354 PDIVIWGALLGACRTHGDVRIGKQILKQLLELKPSGS 464
            ++V W  ++GA   HG    G + +K   E++  G+
Sbjct: 386 -NLVSWNVIIGALALHG---CGLEAIKLFEEMQADGT 418



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 45/139 (32%), Positives = 72/139 (51%)
 Frame = +3

Query: 24  IFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGL 203
           +F+ +  K LVSW ++IG  A  G   EA  LF KM+  G+ PD  TF  LLS CS    
Sbjct: 145 LFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRD 204

Query: 204 VDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALL 383
           +D+GR Y +    + G+  +I     +VD+  + G L  A  +      + ++V W +++
Sbjct: 205 LDLGR-YVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIF-DRTQEKNVVSWTSMI 262

Query: 384 GACRTHGDVRIGKQILKQL 440
            A   HG + + +QI  Q+
Sbjct: 263 SAYAQHGSIEVARQIFDQM 281


>emb|CBI38358.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score =  247 bits (630), Expect = 1e-63
 Identities = 119/166 (71%), Positives = 138/166 (83%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A+DIF +MP KNLVSW  IIGALALHGCGLEAIKLFE+MQA+G  PDEIT T LLSACSH
Sbjct: 308 ALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSH 367

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GLVD+G  YF +M  +Y +  EIEHYACMVDLLGRGG L EA+ LI  MPMKPD+V+WG
Sbjct: 368 SGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWG 427

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           ALLGACR HG+V IGKQILKQLLEL+P   G+YVL+SN+Y++A +W
Sbjct: 428 ALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRW 473



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           ++ +A  IF++MP KN+VSW ++I      G   EA+ LF KM+   + PDE T   +L+
Sbjct: 203 SIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILA 262

Query: 183 ACSHCGLVDIGR---DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMK 353
           ACS  G + +G+   +Y    +  YG+      Y  ++D+  + G +  A+ +   MP K
Sbjct: 263 ACSQLGDLVMGKKIHNYILSNKGAYGVT----LYNSLIDMYAKCGPVVTALDIFLEMPGK 318

Query: 354 PDIVIWGALLGACRTHGDVRIGKQILKQLLELKPSGS 464
            ++V W  ++GA   HG    G + +K   E++  G+
Sbjct: 319 -NLVSWNVIIGALALHG---CGLEAIKLFEEMQADGT 351


>ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513197|gb|AES94820.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  231 bits (589), Expect = 7e-59
 Identities = 112/170 (65%), Positives = 135/170 (79%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           AL  A+D+F  MP KN VSW  IIGALALHG G EAI++FEKMQA G+CPDEITFT LLS
Sbjct: 417 ALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLS 476

Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
           ACSH GLVD G+ YF  M   +GI  ++EHYACMVDLLGR G L EA+ LI+ MP+KPD+
Sbjct: 477 ACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDV 536

Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           V+W ALLGACRT+G++ IGKQI+KQLLEL    SG+YVLLSN+Y ++ +W
Sbjct: 537 VVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRW 586



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 4/153 (2%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A++ FN+MP KN+VSW +II      G   EA+ LF +M   G+  ++ T   +LS+CSH
Sbjct: 320 ALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSH 379

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYA----CMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
            G + +G     K    Y   + I   A     ++D+  + G L  AM +  GMP K + 
Sbjct: 380 MGDLALG-----KQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEK-NA 433

Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSG 461
           V W  ++GA   HG    GK+ ++   +++ SG
Sbjct: 434 VSWNVIIGALALHG---YGKEAIEMFEKMQASG 463



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/139 (27%), Positives = 66/139 (47%)
 Frame = +3

Query: 24  IFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGL 203
           +F+ +  + LVSW ++I   +  G   EA+ +F +MQ  G+ PD  T   LLS  +  G 
Sbjct: 191 VFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGN 250

Query: 204 VDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALL 383
            D+GR + +    V GI  +      ++D+  + G L  A  +   M +  D+V W  ++
Sbjct: 251 FDLGR-FVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQM-LDKDVVSWTCMI 308

Query: 384 GACRTHGDVRIGKQILKQL 440
            A   HG +    +   Q+
Sbjct: 309 NAYANHGLIDCALEFFNQM 327


>gb|ESW28860.1| hypothetical protein PHAVU_002G024100g [Phaseolus vulgaris]
          Length = 667

 Score =  231 bits (588), Expect = 9e-59
 Identities = 113/170 (66%), Positives = 135/170 (79%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           AL  A+DIF  MP KN+VSW  IIGALALHG G EAI+ F +MQA G+CPDEITFT LLS
Sbjct: 420 ALDTAMDIFFGMPEKNVVSWNVIIGALALHGFGEEAIENFRRMQASGLCPDEITFTGLLS 479

Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
           ACSH GLVD+GR YF  M S +GI   + HYACMVDLLGRGG + EAM LI+ MP+KPD+
Sbjct: 480 ACSHSGLVDMGRYYFDTMSSTFGISPNVAHYACMVDLLGRGGFIGEAMTLIQKMPVKPDV 539

Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           V+WGALLGACRT+G++ I KQI+KQLLEL    SG+YVLLSN+Y ++ +W
Sbjct: 540 VVWGALLGACRTYGNLEIAKQIMKQLLELGRYDSGLYVLLSNMYSESQRW 589



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 49/149 (32%), Positives = 80/149 (53%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A+ +FN+MP KN+VSW +II      G   EA++LF +M   G+ PD+ T   +LS CSH
Sbjct: 323 AVQMFNQMPVKNVVSWNSIIWCHVQEGLYTEAMQLFYRMCISGVIPDDGTLVNILSCCSH 382

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            G + +G+   +       I   +     ++D+  + G LD AM +  GMP K ++V W 
Sbjct: 383 MGDLALGKQ-AHNYICGNNITVSVTLCNSLIDMYAKCGALDTAMDIFFGMPEK-NVVSWN 440

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSG 461
            ++GA   HG    G++ ++    ++ SG
Sbjct: 441 VIIGALALHG---FGEEAIENFRRMQASG 466



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 41/142 (28%), Positives = 70/142 (49%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A  +F+ +  + LVSW ++I   +  G    A+ L E+MQ +G+ PD  TF  LLS  S 
Sbjct: 191 ARQVFDDISDRTLVSWNSMIAGYSKIGHCHGAVMLLEEMQHQGVQPDVFTFVSLLSVSSK 250

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            G +D+GR     + +    +  I   A ++D+ G+ G L  A  +   M +  ++V W 
Sbjct: 251 NGNLDLGRFVHLYIITTDVQIDSIVTNA-LIDMYGKCGNLQYAKRVFDRM-LDKNVVSWT 308

Query: 375 ALLGACRTHGDVRIGKQILKQL 440
            ++ A   HG +    Q+  Q+
Sbjct: 309 CMVNAYANHGLIDNAVQMFNQM 330


>ref|XP_004301874.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 655

 Score =  229 bits (585), Expect = 2e-58
 Identities = 112/170 (65%), Positives = 139/170 (81%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           A+  A+DIF ++P KNLVSW  II ALALHG G EAI++FE+MQ  GI PDEITF  LLS
Sbjct: 413 AVRTAMDIFTQIPEKNLVSWNIIISALALHGYGSEAIRIFEQMQEGGIWPDEITFIGLLS 472

Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
           ACSH GL+D+GR +F +M+SVY I  EIEHYAC+VDLLGR G L+EA+ L+RGMPMKPDI
Sbjct: 473 ACSHSGLLDLGRFFFERMKSVYRISPEIEHYACLVDLLGRRGCLEEAITLMRGMPMKPDI 532

Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           V+WGA+LGACR HG+V + K ILKQLLEL+  GSG+YVLL+N++ +A +W
Sbjct: 533 VVWGAMLGACRIHGNVDLAKLILKQLLELELHGSGLYVLLANIFGEAHRW 582



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 47/147 (31%), Positives = 77/147 (52%)
 Frame = +3

Query: 6   LGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSA 185
           + +A   F++MP KN+VSW ++I      G   EA+ LF+KM   G+ PDE T   +LSA
Sbjct: 313 IDVAGKFFDQMPLKNVVSWNSLISCYVREGQCREALDLFQKMLDSGVAPDEATLVFILSA 372

Query: 186 CSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIV 365
           CS  G + IG++  +   S   I   +  Y  ++D+  + G +  AM +   +P K ++V
Sbjct: 373 CSQVGDLVIGKE-AHDHISKSNIALTVTLYNSLIDMYAKCGAVRTAMDIFTQIPEK-NLV 430

Query: 366 IWGALLGACRTHGDVRIGKQILKQLLE 446
            W  ++ A   HG      +I +Q+ E
Sbjct: 431 SWNIIISALALHGYGSEAIRIFEQMQE 457



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 46/142 (32%), Positives = 78/142 (54%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A ++F++M  ++LVSW ++IG  +  GC  EA  LF +M+  G+ PD+ T   LLS CS 
Sbjct: 184 ARNVFDEMSERSLVSWNSMIGGYSGVGCWKEAFGLFREMRGFGVEPDKYTLVNLLSVCSQ 243

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
              +D+GR Y +    V G+V +      ++D+ G+ G L  A M+   M  K ++V W 
Sbjct: 244 SCDLDLGR-YLHHFVVVSGMVVDHILRNALLDMYGKCGHLASAEMVFNQMGCK-NVVSWT 301

Query: 375 ALLGACRTHGDVRIGKQILKQL 440
           +++ A   HG + +  +   Q+
Sbjct: 302 SMVRAYAKHGCIDVAGKFFDQM 323


>ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 667

 Score =  224 bits (572), Expect = 6e-57
 Identities = 113/170 (66%), Positives = 134/170 (78%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           AL  AIDIF  MP KN+VSW  IIGALALHG G EAI++F+ MQA G+ PDEITFT LLS
Sbjct: 420 ALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLS 479

Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
           ACSH GLVD+GR YF  M S + I   +EHYACMVDLLGRGG L EAM LI+ MP+KPD+
Sbjct: 480 ACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDV 539

Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           V+WGALLGACR +G++ I KQI+KQLLEL    SG+YVLLSN+Y ++ +W
Sbjct: 540 VVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRW 589



 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A+ IFN MP KN+VSW +II  L   G   EA++LF +M   G+ PD+ T   +LS CS+
Sbjct: 323 AVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSN 382

Query: 195 CGLVDIGRD-YFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIW 371
            G + +G+  + Y   ++  I   +     ++D+  + G L  A+ +  GMP K ++V W
Sbjct: 383 TGDLALGKQAHCYICDNI--ITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEK-NVVSW 439

Query: 372 GALLGACRTHGDVRIGKQILKQLLELKPSG 461
             ++GA   HG    G++ ++    ++ SG
Sbjct: 440 NVIIGALALHG---FGEEAIEMFKSMQASG 466


>ref|XP_004959653.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Setaria italica]
          Length = 643

 Score =  210 bits (534), Expect = 2e-52
 Identities = 97/166 (58%), Positives = 126/166 (75%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           AI +F++M  +N+VSW  IIG LA+HG  L++I LF  M ++   PDEITF  LLSACSH
Sbjct: 404 AISLFSEMCHRNVVSWNVIIGGLAMHGRALDSIMLFRSMVSDSFSPDEITFVALLSACSH 463

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GL++ G+ YF  MR VY + HE+EHYACMVDLLGR G L++A+ LI+ MPMKPD+V+WG
Sbjct: 464 GGLLEAGQHYFEAMRHVYNVKHEVEHYACMVDLLGRRGYLEKAICLIKEMPMKPDVVVWG 523

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           ALLGACR HG V IG+Q++KQLLEL+    G+ VL+SNL Y+  +W
Sbjct: 524 ALLGACRMHGSVEIGRQVIKQLLELEGISGGLLVLISNLLYETHQW 569



 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 42/130 (32%), Positives = 70/130 (53%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A D F++MP +N+VSW A+I      G   EA+ L+  MQ++G+ PDE+T   +LSAC  
Sbjct: 303 ARDWFDQMPERNIVSWNAMISCYVQCGQCHEALDLYNHMQSQGLAPDEVTLVAILSACGQ 362

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            G + +G+     +R       +I     +VD+  + G++D A+ L   M  + ++V W 
Sbjct: 363 IGDLTVGKIIHLYIRDNIS-NPDISLVNSLVDMYAKCGQVDTAISLFSEMCHR-NVVSWN 420

Query: 375 ALLGACRTHG 404
            ++G    HG
Sbjct: 421 VIIGGLAMHG 430



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 46/139 (33%), Positives = 70/139 (50%)
 Frame = +3

Query: 30  NKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGLVD 209
           ++M  +N+VSW ++IG  A  G   E  KLF +M+ EG+  D+ T   LL ACS  G ++
Sbjct: 176 DEMVERNVVSWNSMIGGYAQAGDTREVRKLFGEMRREGVLEDKFTLVSLLLACSQEGNLE 235

Query: 210 IGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALLGA 389
            GR     M  V G   ++     +VD+ G+ G L  A      MP+K ++V W ++L A
Sbjct: 236 FGRLVHCHM-LVSGSRVDLILGNALVDMYGKCGDLWMARRCFEMMPLK-NVVSWTSMLCA 293

Query: 390 CRTHGDVRIGKQILKQLLE 446
              HG     +    Q+ E
Sbjct: 294 QAKHGSADAARDWFDQMPE 312


>ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
           gi|241926185|gb|EER99329.1| hypothetical protein
           SORBIDRAFT_02g032350 [Sorghum bicolor]
          Length = 638

 Score =  210 bits (534), Expect = 2e-52
 Identities = 95/166 (57%), Positives = 125/166 (75%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           AI +F++M  +N+VSW  IIG LA+HG  L+ I  F  M  +   PD ITF  LLSACSH
Sbjct: 399 AISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSH 458

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GL++ G+ YF  MR VY + HE+EHYACMVDLLGR G L++A+ LI+ MPMKPD+V+WG
Sbjct: 459 GGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWG 518

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           ALLGACR HG+V+IG+Q++KQLLEL+    G++VL+SNL Y+  +W
Sbjct: 519 ALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQW 564



 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
 Frame = +3

Query: 27  FNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGLV 206
           F+ MP +N+VSW A+I      G   EA+ L+ +MQ++G+ PDEIT   +LSA    G +
Sbjct: 302 FDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDL 361

Query: 207 DIGR-DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALL 383
            +G+  + Y   ++Y    ++     ++D+  + G++D A+ L   M    ++V W  ++
Sbjct: 362 TVGKMVHLYIRDNIYN--PDVSLVNSLLDMYAKCGQVDTAISLFSEM-CNRNVVSWNVII 418

Query: 384 GACRTHG 404
           G    HG
Sbjct: 419 GGLAMHG 425



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 48/140 (34%), Positives = 73/140 (52%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           +LG +   F++M  +N+VSW ++IG  A  G   E   LF +M+ +G   DE T   LL 
Sbjct: 162 SLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLI 221

Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
           ACS  G ++IGR    +M  V G   ++   + +VD+ G+ G L  A      MP+K  +
Sbjct: 222 ACSQEGNLEIGRLVHCRM-LVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIK-SV 279

Query: 363 VIWGALLGACRTHGDVRIGK 422
           V W ++L A   HG V   +
Sbjct: 280 VSWTSMLCAQTKHGSVNAAR 299


>gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
          Length = 644

 Score =  209 bits (533), Expect = 2e-52
 Identities = 94/166 (56%), Positives = 129/166 (77%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           AI +F++MP+KN++SW AIIGALA+HG   +A+  F  M ++   PDEITF  LLSAC+H
Sbjct: 397 AISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNH 456

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GL++ G+ YF  MR VY +   +EHYACMVDLLGRGG+L +A+ LI+ MPM+PD+V+WG
Sbjct: 457 GGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWG 516

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           ALLGACR HG ++IGKQ++KQLLEL+    G++VL+SN+ Y+  +W
Sbjct: 517 ALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQW 562



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           ++  A D F ++P K+++SW A+I      G   EA+ L+ +M+  G+ PDE T   +LS
Sbjct: 292 SIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLS 351

Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHE--IEHYACMVDLLGRGGRLDEAMMLIRGMPMKP 356
           AC   G +  G+     +R  +   H   +  +  ++D+  R G++D A+ L   MP K 
Sbjct: 352 ACGQLGDLASGKMIHDCIRDNF---HNPGVALFNSLLDMYARCGQVDTAISLFSEMPSK- 407

Query: 357 DIVIWGALLGACRTHG 404
           +++ W A++GA   HG
Sbjct: 408 NVISWNAIIGALAMHG 423



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 45/148 (30%), Positives = 72/148 (48%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           +LG +   F++M  +N+VSW ++I   A  G   EA  LFE M+ +G+  DE T   LL 
Sbjct: 160 SLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLF 219

Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
           ACS  G ++ G+   +    V G   ++     +VD+ G+ G L  A      MP K + 
Sbjct: 220 ACSAEGNLEFGK-LVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFK-NA 277

Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLE 446
           V W ++L A      +   +   +Q+ E
Sbjct: 278 VSWTSMLCALAKRASIDAARDWFEQIPE 305


>ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
           gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa
           Japonica Group] gi|125606583|gb|EAZ45619.1| hypothetical
           protein OsJ_30287 [Oryza sativa Japonica Group]
          Length = 644

 Score =  208 bits (530), Expect = 5e-52
 Identities = 94/166 (56%), Positives = 128/166 (77%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           AI +F++MP+KN++SW AIIGALA+HG   +A+  F  M  +   PDEITF  LLSAC+H
Sbjct: 397 AISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNH 456

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GL++ G+ YF  MR VY +   +EHYACMVDLLGRGG+L +A+ LI+ MPM+PD+V+WG
Sbjct: 457 GGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWG 516

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           ALLGACR HG ++IGKQ++KQLLEL+    G++VL+SN+ Y+  +W
Sbjct: 517 ALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQW 562



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           ++  A D F ++P K+++SW A+I      G   EA+ L+ +M+  G+ PDE T   +LS
Sbjct: 292 SIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLS 351

Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHE--IEHYACMVDLLGRGGRLDEAMMLIRGMPMKP 356
           AC   G +  G+     +R  +   H   +  +  ++D+  R G++D A+ L   MP K 
Sbjct: 352 ACGQLGDLASGKMIHDCIRDNF---HNPGVALFNSLLDMYARCGQVDTAISLFSEMPSK- 407

Query: 357 DIVIWGALLGACRTHG 404
           +++ W A++GA   HG
Sbjct: 408 NVISWNAIIGALAMHG 423



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 45/148 (30%), Positives = 72/148 (48%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           +LG +   F++M  +N+VSW ++I   A  G   EA  LFE M+ +G+  DE T   LL 
Sbjct: 160 SLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLF 219

Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
           ACS  G ++ G+   +    V G   ++     +VD+ G+ G L  A      MP K + 
Sbjct: 220 ACSAEGNLEFGK-LVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFK-NA 277

Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLE 446
           V W ++L A      +   +   +Q+ E
Sbjct: 278 VSWTSMLCALAKRASIDAARDWFEQIPE 305


>ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
           gi|194706828|gb|ACF87498.1| unknown [Zea mays]
          Length = 570

 Score =  206 bits (523), Expect = 3e-51
 Identities = 96/166 (57%), Positives = 124/166 (74%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           AI +F +M  +N+VSW  IIG LA+HG  L+AI  F  M      PD ITF  LLS+CSH
Sbjct: 332 AIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSM-VRNTSPDGITFVALLSSCSH 390

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GL++ G+ YF  MR VY + HE+EHYACMVDLLGR G L++A+ LI+ MPMKPD+V+WG
Sbjct: 391 GGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWG 450

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           ALLGACR HG+V+IGKQ++KQLLEL+    G++VL+SNL Y+  +W
Sbjct: 451 ALLGACRIHGNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQW 496



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
 Frame = +3

Query: 27  FNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGLV 206
           F+ MP +N VSW  +I      G   EA+ L+++MQ+ G  PDE T   +LSAC   G +
Sbjct: 235 FDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDL 294

Query: 207 DIGR-DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALL 383
            +G+  + Y   +++    +I     ++D+  + G++D A+ L R M    ++V W  ++
Sbjct: 295 TVGKMVHLYIRDNIHN--PDISLINSLLDMYAKCGQVDTAIRLFREM-CNRNVVSWNVII 351

Query: 384 GACRTHGDVRIGKQILKQLL-ELKPSGSGVYVLLSN 488
           G    HG         + ++    P G     LLS+
Sbjct: 352 GGLAMHGRALDAITFFRSMVRNTSPDGITFVALLSS 387


>ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321335|gb|EFH51756.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 629

 Score =  204 bits (520), Expect = 7e-51
 Identities = 93/170 (54%), Positives = 125/170 (73%)
 Frame = +3

Query: 3   ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
           +L  A D+FN MP K+LVSW  ++  L +HG G EAI+LF +M+ EGI PD++TF  +L 
Sbjct: 365 SLKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLC 424

Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
           +C+H GL+D G DYFY M  VY +V ++EHY C+VDLLGRGGRL EA+ +++ MPM+P++
Sbjct: 425 SCNHAGLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNV 484

Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           VIWGALLGACR H +V I K++L  L++L PS  G Y LLSN+Y  A  W
Sbjct: 485 VIWGALLGACRMHNEVDIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDW 534



 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
 Frame = +3

Query: 24  IFNKMP--TKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHC 197
           +F+KMP   KN+V+W  II   A  G   EA KL ++M A G+  D      +L+AC+  
Sbjct: 269 MFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAES 328

Query: 198 GLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGA 377
           GL+ +G    + +     +         ++D+  + G L +A  +   MP K D+V W  
Sbjct: 329 GLLSLGM-RAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMP-KKDLVSWNT 386

Query: 378 LLGACRTHGDVRIGKQILKQLLELKPSG 461
           +L     HG    GK+ ++    ++  G
Sbjct: 387 MLHGLGVHGH---GKEAIELFSRMRKEG 411


>ref|XP_006290777.1| hypothetical protein CARUB_v10016882mg [Capsella rubella]
           gi|482559484|gb|EOA23675.1| hypothetical protein
           CARUB_v10016882mg [Capsella rubella]
          Length = 601

 Score =  203 bits (516), Expect = 2e-50
 Identities = 93/166 (56%), Positives = 123/166 (74%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A D+FN MP K+LVSW +++  L +HG G EAI+LF +M+ EGI PD++TF  +L +C+H
Sbjct: 370 AFDVFNNMPKKDLVSWNSMLHGLGVHGHGKEAIELFLRMRKEGIQPDKVTFIAVLCSCNH 429

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GL+D G DYFY M  VY +V +IEHY C+VDLLGRGGRL EA+ +++ MPM+P++VIWG
Sbjct: 430 AGLIDEGIDYFYSMEKVYDLVPQIEHYGCLVDLLGRGGRLKEAIKVVQTMPMQPNVVIWG 489

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           ALLGACR H  V I K++L  L++L PS  G Y LLSN+Y  A  W
Sbjct: 490 ALLGACRMHNKVDIAKEVLDHLVKLDPSDPGNYTLLSNIYAAAEDW 535



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
 Frame = +3

Query: 24  IFNKMP--TKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHC 197
           +F+KMP   KN+V+W  II   A  G   EA +L ++M A G+  D      +L+AC+  
Sbjct: 270 MFDKMPLPAKNVVTWTIIIAGYAEKGLMKEADRLVDQMVASGLRFDAAAAISILAACAES 329

Query: 198 GLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGA 377
           GL+ +G      ++    +         ++D+  + G +++A  +   MP K D+V W +
Sbjct: 330 GLLGLGMRVHSIIKRT-NLNSNASVLNALLDMYAKCGSVEKAFDVFNNMP-KKDLVSWNS 387

Query: 378 LLGACRTHGDVRIGKQILKQLLELKPSG 461
           +L     HG    GK+ ++  L ++  G
Sbjct: 388 MLHGLGVHGH---GKEAIELFLRMRKEG 412


>gb|EMT03504.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
          Length = 634

 Score =  202 bits (513), Expect = 5e-50
 Identities = 94/166 (56%), Positives = 122/166 (73%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           +I +F +MP KN +SW  +IGALA+HG   EA+  F  M ++   PDEITF  LLSACSH
Sbjct: 395 SISLFTEMPNKNTISWNVLIGALAMHGRAQEAVMFFRAMISDAFSPDEITFVGLLSACSH 454

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GL++ G+ YF  MR VY +  E+EHYACMVDLLGR G L +A+ LI+ MPMKPD+V+WG
Sbjct: 455 GGLLEDGQYYFKAMRHVYNVKPEVEHYACMVDLLGRRGHLAKAVDLIKDMPMKPDVVVWG 514

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           AL+GACR HG+V IGK  +KQLLEL+    G++VL+SNL Y+  +W
Sbjct: 515 ALIGACRIHGNVEIGKLAIKQLLELEGMNGGLFVLISNLLYETHQW 560



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 46/136 (33%), Positives = 68/136 (50%)
 Frame = +3

Query: 39  PTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGLVDIGR 218
           P +N+VSW  +IG  A  G   E   LF +M+ +G+  D  TF  LL  CS  G +++GR
Sbjct: 170 PDRNVVSWNTMIGGCAQAGETSEVCALFGEMRRQGVLADVFTFVSLLLVCSSEGNLEVGR 229

Query: 219 DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALLGACRT 398
                M +    V  I   A +VD+ G+ G L  A      MP+K ++V W ++L A   
Sbjct: 230 LVHCHMLASGSRVDLILGNA-LVDMYGKCGDLWMAHRCFDMMPIK-NVVSWTSMLCALAK 287

Query: 399 HGDVRIGKQILKQLLE 446
           HG V   +   +Q+ E
Sbjct: 288 HGSVDAARDWFEQMPE 303



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/130 (30%), Positives = 66/130 (50%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A D F +MP +N+VSW A+I      G   E + ++ +M++ G+ PDE T   +LSA   
Sbjct: 294 ARDWFEQMPERNIVSWNAMISCYVQGGRFRETLGIYNRMKSLGLTPDEATLAGVLSAHGQ 353

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            G +  GR     ++  +     +     ++D+  R G++D ++ L   MP K + + W 
Sbjct: 354 NGDLASGRMIHCYIKDNFS-DPGVTLLNSLLDMYARCGQVDTSISLFTEMPNK-NTISWN 411

Query: 375 ALLGACRTHG 404
            L+GA   HG
Sbjct: 412 VLIGALAMHG 421


>dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 634

 Score =  201 bits (512), Expect = 6e-50
 Identities = 94/166 (56%), Positives = 121/166 (72%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           +I +F +MP KN +SW  IIGALA+HG   EA+  F  M ++   PDEITF  LLSACSH
Sbjct: 395 SISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACSH 454

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GL++ G+ YF  MR +Y +  E+EHYACMVDLLGR G L +A+ LI+ MPMKPD+V+WG
Sbjct: 455 GGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWG 514

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           AL+GACR HG V IGK  +KQLLEL+    G++VL+SNL Y+  +W
Sbjct: 515 ALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQW 560



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 47/136 (34%), Positives = 69/136 (50%)
 Frame = +3

Query: 39  PTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGLVDIGR 218
           P +N+VSW  +IG  A  G   EA  LF +M+ +G+  D  TF  LL  CS  G +++GR
Sbjct: 170 PHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGR 229

Query: 219 DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALLGACRT 398
                M +    V  I   A +VD+ G+ G L  A      MP+K ++V W ++L A   
Sbjct: 230 LVHCHMLASGSRVDLILGNA-LVDMYGKCGDLWMAHRCFDVMPIK-NVVSWTSMLCALAK 287

Query: 399 HGDVRIGKQILKQLLE 446
           HG V   +   +Q+ E
Sbjct: 288 HGSVDAARDWFEQMPE 303



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 37/130 (28%), Positives = 66/130 (50%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A D F +MP +N++SW A+I      G   E + L+ +M++ G+ PDE+T   +LS    
Sbjct: 294 ARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQ 353

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            G +  GR     ++  +     +     ++D+  R G++D ++ L   MP K + + W 
Sbjct: 354 NGDLASGRMIHCYIQDSFS-DPGVTVLNSLIDMYARCGQVDTSISLFTEMPNK-NTISWN 411

Query: 375 ALLGACRTHG 404
            ++GA   HG
Sbjct: 412 VIIGALAMHG 421


>ref|XP_004984117.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Setaria italica]
          Length = 774

 Score =  198 bits (504), Expect = 5e-49
 Identities = 94/169 (55%), Positives = 120/169 (71%)
 Frame = +3

Query: 6   LGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSA 185
           L  A+ +F+ MP ++  +W AII  L +HG G +A+ LF +MQ EGI PD +TF  LL+A
Sbjct: 451 LAEAMLLFDHMPRRSTGTWNAIIAGLGVHGHGAKALDLFSEMQQEGIKPDHVTFVSLLAA 510

Query: 186 CSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIV 365
           CSH GLVD GR +F  M++VYGIV   +HYACMVD+LGR G+LDEA   I+GMP+KPD  
Sbjct: 511 CSHAGLVDQGRSFFDSMQTVYGIVPIAKHYACMVDMLGRAGQLDEAFEFIQGMPIKPDSA 570

Query: 366 IWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           +WGALLGACR HG+V +GK   + L EL P   G YVL+SN+Y   GKW
Sbjct: 571 VWGALLGACRIHGNVEMGKLASQNLCELDPENVGYYVLMSNMYAKIGKW 619



 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 37/136 (27%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A  +F++MP +++ +W A++  L  +   ++A+ LF +M   G+  D +T + +L  C  
Sbjct: 149 AYRVFDEMPERDVPAWNAMLSGLCRNARAVDAVALFGRMVGLGLDGDAVTLSSVLPMC-- 206

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEI--EHYAC--MVDLLGRGGRLDEAMMLIRGMPMKPDI 362
              V +G      +  VY + H +  E + C  ++D+ G+ G L+EA  +  GM ++ D+
Sbjct: 207 ---VLLGDRALALVMHVYAVKHGLDGELFVCNALIDVYGKLGMLEEAQWVFDGMALR-DL 262

Query: 363 VIWGALLGACRTHGDV 410
           V W +++ A    G V
Sbjct: 263 VTWNSIISAYEQGGKV 278



 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
 Frame = +3

Query: 24  IFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQA-EGICPDEITFTLLLSACSHCG 200
           +F+    +++VSW  +I     +G   EAI  +  MQ  EG+ P + TF  +L A S+ G
Sbjct: 355 VFDNFLARDVVSWNTLITGYMQNGLSNEAINAYNHMQKHEGLKPVQGTFVSVLPAYSNLG 414

Query: 201 LVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGAL 380
            +  G    + +    G+  ++    C++DL  + G+L EAM+L   MP +     W A+
Sbjct: 415 ALQQGMR-MHALSIKTGLNLDVYVSTCLIDLYAKCGKLAEAMLLFDHMPRR-STGTWNAI 472

Query: 381 LGACRTHGDVRIGKQILKQLLELKPSG 461
           +     HG    G + L    E++  G
Sbjct: 473 IAGLGVHGH---GAKALDLFSEMQQEG 496


>ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Brachypodium distachyon]
          Length = 657

 Score =  197 bits (500), Expect = 1e-48
 Identities = 91/166 (54%), Positives = 119/166 (71%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           AI +F +MP KN++SW  IIGALA+HG   E +  F  M ++   PDEITF  LLSACSH
Sbjct: 401 AIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSACSH 460

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GL++ G  YF  M  VY +  E+EHY CMVDLLGR G L +A+ LI+ M +KPD+V+WG
Sbjct: 461 GGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWG 520

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           ALLGACR HG+V IGK ++KQLLEL+    G++VL+ NL+Y+  +W
Sbjct: 521 ALLGACRIHGNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQW 566



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 41/128 (32%), Positives = 67/128 (52%)
 Frame = +3

Query: 21  DIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCG 200
           D F +MP +N+VSW A+I      G   E + L+ +M++ GI PDE T   +LSAC   G
Sbjct: 302 DWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNG 361

Query: 201 LVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGAL 380
            +  G+     +R  +     +     ++D+  R G++D A+ L   MP K +++ W  +
Sbjct: 362 DLASGKMIHCYVRDNFN-DPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNK-NVISWNVI 419

Query: 381 LGACRTHG 404
           +GA   HG
Sbjct: 420 IGALAMHG 427



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 47/140 (33%), Positives = 70/140 (50%)
 Frame = +3

Query: 27  FNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGLV 206
           F +M  +N+VSW  +IG  A  G   EA  LF +M+ +G+  D  T   LL ACS  G +
Sbjct: 172 FGEMADRNVVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNL 231

Query: 207 DIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALLG 386
           ++GR     M      V  I   A ++D+ G+ G L  A      MP+K ++V W ++L 
Sbjct: 232 EVGRLVHCHMLVSGSRVDRILGNA-LLDMYGKCGDLWMAHRCFDMMPIK-NVVTWTSMLC 289

Query: 387 ACRTHGDVRIGKQILKQLLE 446
           A   HG V   +   +Q+ E
Sbjct: 290 AQAKHGSVDAVRDWFEQMPE 309


>ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g29230 gi|9293916|dbj|BAB01819.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332644032|gb|AEE77553.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 600

 Score =  196 bits (499), Expect = 2e-48
 Identities = 89/166 (53%), Positives = 121/166 (72%)
 Frame = +3

Query: 15  AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
           A D+FN +P K+LVSW  ++  L +HG G EAI+LF +M+ EGI PD++TF  +L +C+H
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 428

Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
            GL+D G DYFY M  VY +V ++EHY C+VDLLGR GRL EA+ +++ MPM+P++VIWG
Sbjct: 429 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 488

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
           ALLGACR H +V I K++L  L++L P   G Y LLSN+Y  A  W
Sbjct: 489 ALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDW 534



 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
 Frame = +3

Query: 24  IFNKMP--TKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHC 197
           +F+KMP   KN+V+W  II   A  G   EA +L ++M A G+  D      +L+AC+  
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328

Query: 198 GLVDIG-RDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
           GL+ +G R +    RS  G    + +   ++D+  + G L +A  +   +P K D+V W 
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLN--ALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWN 385

Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSG 461
            +L     HG    GK+ ++    ++  G
Sbjct: 386 TMLHGLGVHGH---GKEAIELFSRMRREG 411


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