BLASTX nr result
ID: Jatropha_contig00001896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00001896
(512 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ04885.1| hypothetical protein PRUPE_ppa026192mg [Prunus pe... 251 5e-65
emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera] 247 9e-64
ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containi... 247 1e-63
emb|CBI38358.3| unnamed protein product [Vitis vinifera] 247 1e-63
ref|XP_003611862.1| Pentatricopeptide repeat-containing protein ... 231 7e-59
gb|ESW28860.1| hypothetical protein PHAVU_002G024100g [Phaseolus... 231 9e-59
ref|XP_004301874.1| PREDICTED: pentatricopeptide repeat-containi... 229 2e-58
ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containi... 224 6e-57
ref|XP_004959653.1| PREDICTED: pentatricopeptide repeat-containi... 210 2e-52
ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [S... 210 2e-52
gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indi... 209 2e-52
ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group] g... 208 5e-52
ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea ma... 206 3e-51
ref|XP_002875497.1| pentatricopeptide repeat-containing protein ... 204 7e-51
ref|XP_006290777.1| hypothetical protein CARUB_v10016882mg [Caps... 203 2e-50
gb|EMT03504.1| Pentatricopeptide repeat-containing protein [Aegi... 202 5e-50
dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare] 201 6e-50
ref|XP_004984117.1| PREDICTED: pentatricopeptide repeat-containi... 198 5e-49
ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containi... 197 1e-48
ref|NP_189568.1| pentatricopeptide repeat-containing protein [Ar... 196 2e-48
>gb|EMJ04885.1| hypothetical protein PRUPE_ppa026192mg [Prunus persica]
Length = 559
Score = 251 bits (642), Expect = 5e-65
Identities = 120/170 (70%), Positives = 146/170 (85%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
A+G+A+D+F ++P KN+VSW IIGALALHGCG EAI++F++MQA GI PDEITFT LLS
Sbjct: 317 AVGIAMDLFTQIPEKNVVSWNVIIGALALHGCGFEAIRIFKQMQAGGIWPDEITFTGLLS 376
Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
ACSH GL+D+GR YF +M S+Y I EIEHYACMVDLLGRGG L+EA+ L+ GMPMKPDI
Sbjct: 377 ACSHSGLLDMGRYYFERMESIYRISPEIEHYACMVDLLGRGGFLEEAIRLLIGMPMKPDI 436
Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
VIWGALLGACR HG+V +GKQILKQLLEL+ GSG+YVLLSN++ +A +W
Sbjct: 437 VIWGALLGACRIHGNVDLGKQILKQLLELEGHGSGLYVLLSNIFGEAHRW 486
Score = 73.9 bits (180), Expect = 2e-11
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A + F++MP KN+VSW ++I G A+ LF++M G PDE T +LSACS
Sbjct: 220 AQEFFDQMPLKNVVSWNSMISYYVREGQCRAALDLFQRMLNSGALPDEATLVFILSACSQ 279
Query: 195 CGLVDIG-RDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIW 371
G + IG + + Y S + + + ++D+ + G + AM L +P K ++V W
Sbjct: 280 IGDLVIGKKTHSYICNS--NVTPSVTLFNSLIDMYAKCGAVGIAMDLFTQIPEK-NVVSW 336
Query: 372 GALLGACRTHG----DVRIGKQI 428
++GA HG +RI KQ+
Sbjct: 337 NVIIGALALHGCGFEAIRIFKQM 359
Score = 63.5 bits (153), Expect = 3e-08
Identities = 42/142 (29%), Positives = 71/142 (50%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A ++F+ M ++LVSW ++IG A G A LF M+ G+ PD+ T LLS CS
Sbjct: 88 ARNVFDDMSERSLVSWNSMIGGYARMGSCKGAFLLFRGMRDFGVGPDKFTLVNLLSVCSQ 147
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
+++GR Y + V GI + ++D+ + G L A + M K ++V W
Sbjct: 148 SCDLELGR-YVHLYIEVSGIEVDQILRNALLDMYAKCGHLHLAQTIFYRMTHK-NVVSWT 205
Query: 375 ALLGACRTHGDVRIGKQILKQL 440
+++ A HG + ++ Q+
Sbjct: 206 SMVSAYAKHGLIEFAQEFFDQM 227
>emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 247 bits (631), Expect = 9e-64
Identities = 119/166 (71%), Positives = 138/166 (83%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A+DIF +MP KNLVSW IIGALALHGCGLEAIKLFE+MQA+G PDEIT T LLSACSH
Sbjct: 447 ALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSH 506
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GLVD+G YF +M +Y + EIEHYACMVDLLGRGG L EA+ LI MPMKPD+V+WG
Sbjct: 507 SGLVDMGLYYFDRMGVIYRVXREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWG 566
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
ALLGACR HG+V IGKQILKQLLEL+P G+YVL+SN+Y++A +W
Sbjct: 567 ALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRW 612
Score = 79.3 bits (194), Expect = 4e-13
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
++ +A IF++MP KN+VSW ++I G EA+ LF KM+ + PDE T +L+
Sbjct: 342 SIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILA 401
Query: 183 ACSHCGLVDIGR---DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMK 353
ACS G + +G+ +Y + YG+ Y ++D+ + G + A+ + MP K
Sbjct: 402 ACSQLGDLVMGKKIHNYILSNKGAYGVT----LYNSLIDMYAKCGPVVTALDIFLEMPGK 457
Query: 354 PDIVIWGALLGACRTHGDVRIGKQILKQLLELKPSGS 464
++V W ++GA HG G + +K E++ G+
Sbjct: 458 -NLVSWNVIIGALALHG---CGLEAIKLFEEMQADGT 490
>ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 247 bits (630), Expect = 1e-63
Identities = 119/166 (71%), Positives = 138/166 (83%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A+DIF +MP KNLVSW IIGALALHGCGLEAIKLFE+MQA+G PDEIT T LLSACSH
Sbjct: 375 ALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSH 434
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GLVD+G YF +M +Y + EIEHYACMVDLLGRGG L EA+ LI MPMKPD+V+WG
Sbjct: 435 SGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWG 494
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
ALLGACR HG+V IGKQILKQLLEL+P G+YVL+SN+Y++A +W
Sbjct: 495 ALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRW 540
Score = 79.3 bits (194), Expect = 4e-13
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
++ +A IF++MP KN+VSW ++I G EA+ LF KM+ + PDE T +L+
Sbjct: 270 SIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILA 329
Query: 183 ACSHCGLVDIGR---DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMK 353
ACS G + +G+ +Y + YG+ Y ++D+ + G + A+ + MP K
Sbjct: 330 ACSQLGDLVMGKKIHNYILSNKGAYGVT----LYNSLIDMYAKCGPVVTALDIFLEMPGK 385
Query: 354 PDIVIWGALLGACRTHGDVRIGKQILKQLLELKPSGS 464
++V W ++GA HG G + +K E++ G+
Sbjct: 386 -NLVSWNVIIGALALHG---CGLEAIKLFEEMQADGT 418
Score = 76.3 bits (186), Expect = 4e-12
Identities = 45/139 (32%), Positives = 72/139 (51%)
Frame = +3
Query: 24 IFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGL 203
+F+ + K LVSW ++IG A G EA LF KM+ G+ PD TF LLS CS
Sbjct: 145 LFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRD 204
Query: 204 VDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALL 383
+D+GR Y + + G+ +I +VD+ + G L A + + ++V W +++
Sbjct: 205 LDLGR-YVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIF-DRTQEKNVVSWTSMI 262
Query: 384 GACRTHGDVRIGKQILKQL 440
A HG + + +QI Q+
Sbjct: 263 SAYAQHGSIEVARQIFDQM 281
>emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 247 bits (630), Expect = 1e-63
Identities = 119/166 (71%), Positives = 138/166 (83%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A+DIF +MP KNLVSW IIGALALHGCGLEAIKLFE+MQA+G PDEIT T LLSACSH
Sbjct: 308 ALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSH 367
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GLVD+G YF +M +Y + EIEHYACMVDLLGRGG L EA+ LI MPMKPD+V+WG
Sbjct: 368 SGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWG 427
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
ALLGACR HG+V IGKQILKQLLEL+P G+YVL+SN+Y++A +W
Sbjct: 428 ALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRW 473
Score = 79.3 bits (194), Expect = 4e-13
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
++ +A IF++MP KN+VSW ++I G EA+ LF KM+ + PDE T +L+
Sbjct: 203 SIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILA 262
Query: 183 ACSHCGLVDIGR---DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMK 353
ACS G + +G+ +Y + YG+ Y ++D+ + G + A+ + MP K
Sbjct: 263 ACSQLGDLVMGKKIHNYILSNKGAYGVT----LYNSLIDMYAKCGPVVTALDIFLEMPGK 318
Query: 354 PDIVIWGALLGACRTHGDVRIGKQILKQLLELKPSGS 464
++V W ++GA HG G + +K E++ G+
Sbjct: 319 -NLVSWNVIIGALALHG---CGLEAIKLFEEMQADGT 351
>ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 663
Score = 231 bits (589), Expect = 7e-59
Identities = 112/170 (65%), Positives = 135/170 (79%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
AL A+D+F MP KN VSW IIGALALHG G EAI++FEKMQA G+CPDEITFT LLS
Sbjct: 417 ALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLS 476
Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
ACSH GLVD G+ YF M +GI ++EHYACMVDLLGR G L EA+ LI+ MP+KPD+
Sbjct: 477 ACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDV 536
Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
V+W ALLGACRT+G++ IGKQI+KQLLEL SG+YVLLSN+Y ++ +W
Sbjct: 537 VVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRW 586
Score = 78.2 bits (191), Expect = 1e-12
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 4/153 (2%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A++ FN+MP KN+VSW +II G EA+ LF +M G+ ++ T +LS+CSH
Sbjct: 320 ALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSH 379
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYA----CMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
G + +G K Y + I A ++D+ + G L AM + GMP K +
Sbjct: 380 MGDLALG-----KQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEK-NA 433
Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSG 461
V W ++GA HG GK+ ++ +++ SG
Sbjct: 434 VSWNVIIGALALHG---YGKEAIEMFEKMQASG 463
Score = 57.0 bits (136), Expect = 2e-06
Identities = 38/139 (27%), Positives = 66/139 (47%)
Frame = +3
Query: 24 IFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGL 203
+F+ + + LVSW ++I + G EA+ +F +MQ G+ PD T LLS + G
Sbjct: 191 VFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGN 250
Query: 204 VDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALL 383
D+GR + + V GI + ++D+ + G L A + M + D+V W ++
Sbjct: 251 FDLGR-FVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQM-LDKDVVSWTCMI 308
Query: 384 GACRTHGDVRIGKQILKQL 440
A HG + + Q+
Sbjct: 309 NAYANHGLIDCALEFFNQM 327
>gb|ESW28860.1| hypothetical protein PHAVU_002G024100g [Phaseolus vulgaris]
Length = 667
Score = 231 bits (588), Expect = 9e-59
Identities = 113/170 (66%), Positives = 135/170 (79%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
AL A+DIF MP KN+VSW IIGALALHG G EAI+ F +MQA G+CPDEITFT LLS
Sbjct: 420 ALDTAMDIFFGMPEKNVVSWNVIIGALALHGFGEEAIENFRRMQASGLCPDEITFTGLLS 479
Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
ACSH GLVD+GR YF M S +GI + HYACMVDLLGRGG + EAM LI+ MP+KPD+
Sbjct: 480 ACSHSGLVDMGRYYFDTMSSTFGISPNVAHYACMVDLLGRGGFIGEAMTLIQKMPVKPDV 539
Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
V+WGALLGACRT+G++ I KQI+KQLLEL SG+YVLLSN+Y ++ +W
Sbjct: 540 VVWGALLGACRTYGNLEIAKQIMKQLLELGRYDSGLYVLLSNMYSESQRW 589
Score = 86.3 bits (212), Expect = 4e-15
Identities = 49/149 (32%), Positives = 80/149 (53%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A+ +FN+MP KN+VSW +II G EA++LF +M G+ PD+ T +LS CSH
Sbjct: 323 AVQMFNQMPVKNVVSWNSIIWCHVQEGLYTEAMQLFYRMCISGVIPDDGTLVNILSCCSH 382
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
G + +G+ + I + ++D+ + G LD AM + GMP K ++V W
Sbjct: 383 MGDLALGKQ-AHNYICGNNITVSVTLCNSLIDMYAKCGALDTAMDIFFGMPEK-NVVSWN 440
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSG 461
++GA HG G++ ++ ++ SG
Sbjct: 441 VIIGALALHG---FGEEAIENFRRMQASG 466
Score = 60.5 bits (145), Expect = 2e-07
Identities = 41/142 (28%), Positives = 70/142 (49%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A +F+ + + LVSW ++I + G A+ L E+MQ +G+ PD TF LLS S
Sbjct: 191 ARQVFDDISDRTLVSWNSMIAGYSKIGHCHGAVMLLEEMQHQGVQPDVFTFVSLLSVSSK 250
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
G +D+GR + + + I A ++D+ G+ G L A + M + ++V W
Sbjct: 251 NGNLDLGRFVHLYIITTDVQIDSIVTNA-LIDMYGKCGNLQYAKRVFDRM-LDKNVVSWT 308
Query: 375 ALLGACRTHGDVRIGKQILKQL 440
++ A HG + Q+ Q+
Sbjct: 309 CMVNAYANHGLIDNAVQMFNQM 330
>ref|XP_004301874.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 655
Score = 229 bits (585), Expect = 2e-58
Identities = 112/170 (65%), Positives = 139/170 (81%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
A+ A+DIF ++P KNLVSW II ALALHG G EAI++FE+MQ GI PDEITF LLS
Sbjct: 413 AVRTAMDIFTQIPEKNLVSWNIIISALALHGYGSEAIRIFEQMQEGGIWPDEITFIGLLS 472
Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
ACSH GL+D+GR +F +M+SVY I EIEHYAC+VDLLGR G L+EA+ L+RGMPMKPDI
Sbjct: 473 ACSHSGLLDLGRFFFERMKSVYRISPEIEHYACLVDLLGRRGCLEEAITLMRGMPMKPDI 532
Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
V+WGA+LGACR HG+V + K ILKQLLEL+ GSG+YVLL+N++ +A +W
Sbjct: 533 VVWGAMLGACRIHGNVDLAKLILKQLLELELHGSGLYVLLANIFGEAHRW 582
Score = 78.6 bits (192), Expect = 8e-13
Identities = 47/147 (31%), Positives = 77/147 (52%)
Frame = +3
Query: 6 LGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSA 185
+ +A F++MP KN+VSW ++I G EA+ LF+KM G+ PDE T +LSA
Sbjct: 313 IDVAGKFFDQMPLKNVVSWNSLISCYVREGQCREALDLFQKMLDSGVAPDEATLVFILSA 372
Query: 186 CSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIV 365
CS G + IG++ + S I + Y ++D+ + G + AM + +P K ++V
Sbjct: 373 CSQVGDLVIGKE-AHDHISKSNIALTVTLYNSLIDMYAKCGAVRTAMDIFTQIPEK-NLV 430
Query: 366 IWGALLGACRTHGDVRIGKQILKQLLE 446
W ++ A HG +I +Q+ E
Sbjct: 431 SWNIIISALALHGYGSEAIRIFEQMQE 457
Score = 76.6 bits (187), Expect = 3e-12
Identities = 46/142 (32%), Positives = 78/142 (54%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A ++F++M ++LVSW ++IG + GC EA LF +M+ G+ PD+ T LLS CS
Sbjct: 184 ARNVFDEMSERSLVSWNSMIGGYSGVGCWKEAFGLFREMRGFGVEPDKYTLVNLLSVCSQ 243
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
+D+GR Y + V G+V + ++D+ G+ G L A M+ M K ++V W
Sbjct: 244 SCDLDLGR-YLHHFVVVSGMVVDHILRNALLDMYGKCGHLASAEMVFNQMGCK-NVVSWT 301
Query: 375 ALLGACRTHGDVRIGKQILKQL 440
+++ A HG + + + Q+
Sbjct: 302 SMVRAYAKHGCIDVAGKFFDQM 323
>ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 224 bits (572), Expect = 6e-57
Identities = 113/170 (66%), Positives = 134/170 (78%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
AL AIDIF MP KN+VSW IIGALALHG G EAI++F+ MQA G+ PDEITFT LLS
Sbjct: 420 ALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLS 479
Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
ACSH GLVD+GR YF M S + I +EHYACMVDLLGRGG L EAM LI+ MP+KPD+
Sbjct: 480 ACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDV 539
Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
V+WGALLGACR +G++ I KQI+KQLLEL SG+YVLLSN+Y ++ +W
Sbjct: 540 VVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRW 589
Score = 85.5 bits (210), Expect = 6e-15
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A+ IFN MP KN+VSW +II L G EA++LF +M G+ PD+ T +LS CS+
Sbjct: 323 AVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSN 382
Query: 195 CGLVDIGRD-YFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIW 371
G + +G+ + Y ++ I + ++D+ + G L A+ + GMP K ++V W
Sbjct: 383 TGDLALGKQAHCYICDNI--ITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEK-NVVSW 439
Query: 372 GALLGACRTHGDVRIGKQILKQLLELKPSG 461
++GA HG G++ ++ ++ SG
Sbjct: 440 NVIIGALALHG---FGEEAIEMFKSMQASG 466
>ref|XP_004959653.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Setaria italica]
Length = 643
Score = 210 bits (534), Expect = 2e-52
Identities = 97/166 (58%), Positives = 126/166 (75%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
AI +F++M +N+VSW IIG LA+HG L++I LF M ++ PDEITF LLSACSH
Sbjct: 404 AISLFSEMCHRNVVSWNVIIGGLAMHGRALDSIMLFRSMVSDSFSPDEITFVALLSACSH 463
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GL++ G+ YF MR VY + HE+EHYACMVDLLGR G L++A+ LI+ MPMKPD+V+WG
Sbjct: 464 GGLLEAGQHYFEAMRHVYNVKHEVEHYACMVDLLGRRGYLEKAICLIKEMPMKPDVVVWG 523
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
ALLGACR HG V IG+Q++KQLLEL+ G+ VL+SNL Y+ +W
Sbjct: 524 ALLGACRMHGSVEIGRQVIKQLLELEGISGGLLVLISNLLYETHQW 569
Score = 75.1 bits (183), Expect = 8e-12
Identities = 42/130 (32%), Positives = 70/130 (53%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A D F++MP +N+VSW A+I G EA+ L+ MQ++G+ PDE+T +LSAC
Sbjct: 303 ARDWFDQMPERNIVSWNAMISCYVQCGQCHEALDLYNHMQSQGLAPDEVTLVAILSACGQ 362
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
G + +G+ +R +I +VD+ + G++D A+ L M + ++V W
Sbjct: 363 IGDLTVGKIIHLYIRDNIS-NPDISLVNSLVDMYAKCGQVDTAISLFSEMCHR-NVVSWN 420
Query: 375 ALLGACRTHG 404
++G HG
Sbjct: 421 VIIGGLAMHG 430
Score = 65.1 bits (157), Expect = 9e-09
Identities = 46/139 (33%), Positives = 70/139 (50%)
Frame = +3
Query: 30 NKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGLVD 209
++M +N+VSW ++IG A G E KLF +M+ EG+ D+ T LL ACS G ++
Sbjct: 176 DEMVERNVVSWNSMIGGYAQAGDTREVRKLFGEMRREGVLEDKFTLVSLLLACSQEGNLE 235
Query: 210 IGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALLGA 389
GR M V G ++ +VD+ G+ G L A MP+K ++V W ++L A
Sbjct: 236 FGRLVHCHM-LVSGSRVDLILGNALVDMYGKCGDLWMARRCFEMMPLK-NVVSWTSMLCA 293
Query: 390 CRTHGDVRIGKQILKQLLE 446
HG + Q+ E
Sbjct: 294 QAKHGSADAARDWFDQMPE 312
>ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein
SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 210 bits (534), Expect = 2e-52
Identities = 95/166 (57%), Positives = 125/166 (75%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
AI +F++M +N+VSW IIG LA+HG L+ I F M + PD ITF LLSACSH
Sbjct: 399 AISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSH 458
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GL++ G+ YF MR VY + HE+EHYACMVDLLGR G L++A+ LI+ MPMKPD+V+WG
Sbjct: 459 GGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWG 518
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
ALLGACR HG+V+IG+Q++KQLLEL+ G++VL+SNL Y+ +W
Sbjct: 519 ALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQW 564
Score = 72.0 bits (175), Expect = 7e-11
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Frame = +3
Query: 27 FNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGLV 206
F+ MP +N+VSW A+I G EA+ L+ +MQ++G+ PDEIT +LSA G +
Sbjct: 302 FDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDL 361
Query: 207 DIGR-DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALL 383
+G+ + Y ++Y ++ ++D+ + G++D A+ L M ++V W ++
Sbjct: 362 TVGKMVHLYIRDNIYN--PDVSLVNSLLDMYAKCGQVDTAISLFSEM-CNRNVVSWNVII 418
Query: 384 GACRTHG 404
G HG
Sbjct: 419 GGLAMHG 425
Score = 70.5 bits (171), Expect = 2e-10
Identities = 48/140 (34%), Positives = 73/140 (52%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
+LG + F++M +N+VSW ++IG A G E LF +M+ +G DE T LL
Sbjct: 162 SLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLI 221
Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
ACS G ++IGR +M V G ++ + +VD+ G+ G L A MP+K +
Sbjct: 222 ACSQEGNLEIGRLVHCRM-LVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIK-SV 279
Query: 363 VIWGALLGACRTHGDVRIGK 422
V W ++L A HG V +
Sbjct: 280 VSWTSMLCAQTKHGSVNAAR 299
>gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 209 bits (533), Expect = 2e-52
Identities = 94/166 (56%), Positives = 129/166 (77%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
AI +F++MP+KN++SW AIIGALA+HG +A+ F M ++ PDEITF LLSAC+H
Sbjct: 397 AISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNH 456
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GL++ G+ YF MR VY + +EHYACMVDLLGRGG+L +A+ LI+ MPM+PD+V+WG
Sbjct: 457 GGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWG 516
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
ALLGACR HG ++IGKQ++KQLLEL+ G++VL+SN+ Y+ +W
Sbjct: 517 ALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQW 562
Score = 73.6 bits (179), Expect = 2e-11
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
++ A D F ++P K+++SW A+I G EA+ L+ +M+ G+ PDE T +LS
Sbjct: 292 SIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLS 351
Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHE--IEHYACMVDLLGRGGRLDEAMMLIRGMPMKP 356
AC G + G+ +R + H + + ++D+ R G++D A+ L MP K
Sbjct: 352 ACGQLGDLASGKMIHDCIRDNF---HNPGVALFNSLLDMYARCGQVDTAISLFSEMPSK- 407
Query: 357 DIVIWGALLGACRTHG 404
+++ W A++GA HG
Sbjct: 408 NVISWNAIIGALAMHG 423
Score = 60.8 bits (146), Expect = 2e-07
Identities = 45/148 (30%), Positives = 72/148 (48%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
+LG + F++M +N+VSW ++I A G EA LFE M+ +G+ DE T LL
Sbjct: 160 SLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLF 219
Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
ACS G ++ G+ + V G ++ +VD+ G+ G L A MP K +
Sbjct: 220 ACSAEGNLEFGK-LVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFK-NA 277
Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLE 446
V W ++L A + + +Q+ E
Sbjct: 278 VSWTSMLCALAKRASIDAARDWFEQIPE 305
>ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa
Japonica Group] gi|125606583|gb|EAZ45619.1| hypothetical
protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 208 bits (530), Expect = 5e-52
Identities = 94/166 (56%), Positives = 128/166 (77%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
AI +F++MP+KN++SW AIIGALA+HG +A+ F M + PDEITF LLSAC+H
Sbjct: 397 AISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNH 456
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GL++ G+ YF MR VY + +EHYACMVDLLGRGG+L +A+ LI+ MPM+PD+V+WG
Sbjct: 457 GGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWG 516
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
ALLGACR HG ++IGKQ++KQLLEL+ G++VL+SN+ Y+ +W
Sbjct: 517 ALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQW 562
Score = 73.6 bits (179), Expect = 2e-11
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
++ A D F ++P K+++SW A+I G EA+ L+ +M+ G+ PDE T +LS
Sbjct: 292 SIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLS 351
Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHE--IEHYACMVDLLGRGGRLDEAMMLIRGMPMKP 356
AC G + G+ +R + H + + ++D+ R G++D A+ L MP K
Sbjct: 352 ACGQLGDLASGKMIHDCIRDNF---HNPGVALFNSLLDMYARCGQVDTAISLFSEMPSK- 407
Query: 357 DIVIWGALLGACRTHG 404
+++ W A++GA HG
Sbjct: 408 NVISWNAIIGALAMHG 423
Score = 60.8 bits (146), Expect = 2e-07
Identities = 45/148 (30%), Positives = 72/148 (48%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
+LG + F++M +N+VSW ++I A G EA LFE M+ +G+ DE T LL
Sbjct: 160 SLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLF 219
Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
ACS G ++ G+ + V G ++ +VD+ G+ G L A MP K +
Sbjct: 220 ACSAEGNLEFGK-LVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFK-NA 277
Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLE 446
V W ++L A + + +Q+ E
Sbjct: 278 VSWTSMLCALAKRASIDAARDWFEQIPE 305
>ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 206 bits (523), Expect = 3e-51
Identities = 96/166 (57%), Positives = 124/166 (74%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
AI +F +M +N+VSW IIG LA+HG L+AI F M PD ITF LLS+CSH
Sbjct: 332 AIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSM-VRNTSPDGITFVALLSSCSH 390
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GL++ G+ YF MR VY + HE+EHYACMVDLLGR G L++A+ LI+ MPMKPD+V+WG
Sbjct: 391 GGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWG 450
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
ALLGACR HG+V+IGKQ++KQLLEL+ G++VL+SNL Y+ +W
Sbjct: 451 ALLGACRIHGNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQW 496
Score = 69.3 bits (168), Expect = 5e-10
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Frame = +3
Query: 27 FNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGLV 206
F+ MP +N VSW +I G EA+ L+++MQ+ G PDE T +LSAC G +
Sbjct: 235 FDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDL 294
Query: 207 DIGR-DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALL 383
+G+ + Y +++ +I ++D+ + G++D A+ L R M ++V W ++
Sbjct: 295 TVGKMVHLYIRDNIHN--PDISLINSLLDMYAKCGQVDTAIRLFREM-CNRNVVSWNVII 351
Query: 384 GACRTHGDVRIGKQILKQLL-ELKPSGSGVYVLLSN 488
G HG + ++ P G LLS+
Sbjct: 352 GGLAMHGRALDAITFFRSMVRNTSPDGITFVALLSS 387
>ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321335|gb|EFH51756.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 629
Score = 204 bits (520), Expect = 7e-51
Identities = 93/170 (54%), Positives = 125/170 (73%)
Frame = +3
Query: 3 ALGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLS 182
+L A D+FN MP K+LVSW ++ L +HG G EAI+LF +M+ EGI PD++TF +L
Sbjct: 365 SLKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLC 424
Query: 183 ACSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDI 362
+C+H GL+D G DYFY M VY +V ++EHY C+VDLLGRGGRL EA+ +++ MPM+P++
Sbjct: 425 SCNHAGLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNV 484
Query: 363 VIWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
VIWGALLGACR H +V I K++L L++L PS G Y LLSN+Y A W
Sbjct: 485 VIWGALLGACRMHNEVDIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDW 534
Score = 58.9 bits (141), Expect = 6e-07
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Frame = +3
Query: 24 IFNKMP--TKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHC 197
+F+KMP KN+V+W II A G EA KL ++M A G+ D +L+AC+
Sbjct: 269 MFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAES 328
Query: 198 GLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGA 377
GL+ +G + + + ++D+ + G L +A + MP K D+V W
Sbjct: 329 GLLSLGM-RAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMP-KKDLVSWNT 386
Query: 378 LLGACRTHGDVRIGKQILKQLLELKPSG 461
+L HG GK+ ++ ++ G
Sbjct: 387 MLHGLGVHGH---GKEAIELFSRMRKEG 411
>ref|XP_006290777.1| hypothetical protein CARUB_v10016882mg [Capsella rubella]
gi|482559484|gb|EOA23675.1| hypothetical protein
CARUB_v10016882mg [Capsella rubella]
Length = 601
Score = 203 bits (516), Expect = 2e-50
Identities = 93/166 (56%), Positives = 123/166 (74%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A D+FN MP K+LVSW +++ L +HG G EAI+LF +M+ EGI PD++TF +L +C+H
Sbjct: 370 AFDVFNNMPKKDLVSWNSMLHGLGVHGHGKEAIELFLRMRKEGIQPDKVTFIAVLCSCNH 429
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GL+D G DYFY M VY +V +IEHY C+VDLLGRGGRL EA+ +++ MPM+P++VIWG
Sbjct: 430 AGLIDEGIDYFYSMEKVYDLVPQIEHYGCLVDLLGRGGRLKEAIKVVQTMPMQPNVVIWG 489
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
ALLGACR H V I K++L L++L PS G Y LLSN+Y A W
Sbjct: 490 ALLGACRMHNKVDIAKEVLDHLVKLDPSDPGNYTLLSNIYAAAEDW 535
Score = 61.2 bits (147), Expect = 1e-07
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = +3
Query: 24 IFNKMP--TKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHC 197
+F+KMP KN+V+W II A G EA +L ++M A G+ D +L+AC+
Sbjct: 270 MFDKMPLPAKNVVTWTIIIAGYAEKGLMKEADRLVDQMVASGLRFDAAAAISILAACAES 329
Query: 198 GLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGA 377
GL+ +G ++ + ++D+ + G +++A + MP K D+V W +
Sbjct: 330 GLLGLGMRVHSIIKRT-NLNSNASVLNALLDMYAKCGSVEKAFDVFNNMP-KKDLVSWNS 387
Query: 378 LLGACRTHGDVRIGKQILKQLLELKPSG 461
+L HG GK+ ++ L ++ G
Sbjct: 388 MLHGLGVHGH---GKEAIELFLRMRKEG 412
>gb|EMT03504.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 634
Score = 202 bits (513), Expect = 5e-50
Identities = 94/166 (56%), Positives = 122/166 (73%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
+I +F +MP KN +SW +IGALA+HG EA+ F M ++ PDEITF LLSACSH
Sbjct: 395 SISLFTEMPNKNTISWNVLIGALAMHGRAQEAVMFFRAMISDAFSPDEITFVGLLSACSH 454
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GL++ G+ YF MR VY + E+EHYACMVDLLGR G L +A+ LI+ MPMKPD+V+WG
Sbjct: 455 GGLLEDGQYYFKAMRHVYNVKPEVEHYACMVDLLGRRGHLAKAVDLIKDMPMKPDVVVWG 514
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
AL+GACR HG+V IGK +KQLLEL+ G++VL+SNL Y+ +W
Sbjct: 515 ALIGACRIHGNVEIGKLAIKQLLELEGMNGGLFVLISNLLYETHQW 560
Score = 64.7 bits (156), Expect = 1e-08
Identities = 46/136 (33%), Positives = 68/136 (50%)
Frame = +3
Query: 39 PTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGLVDIGR 218
P +N+VSW +IG A G E LF +M+ +G+ D TF LL CS G +++GR
Sbjct: 170 PDRNVVSWNTMIGGCAQAGETSEVCALFGEMRRQGVLADVFTFVSLLLVCSSEGNLEVGR 229
Query: 219 DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALLGACRT 398
M + V I A +VD+ G+ G L A MP+K ++V W ++L A
Sbjct: 230 LVHCHMLASGSRVDLILGNA-LVDMYGKCGDLWMAHRCFDMMPIK-NVVSWTSMLCALAK 287
Query: 399 HGDVRIGKQILKQLLE 446
HG V + +Q+ E
Sbjct: 288 HGSVDAARDWFEQMPE 303
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/130 (30%), Positives = 66/130 (50%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A D F +MP +N+VSW A+I G E + ++ +M++ G+ PDE T +LSA
Sbjct: 294 ARDWFEQMPERNIVSWNAMISCYVQGGRFRETLGIYNRMKSLGLTPDEATLAGVLSAHGQ 353
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
G + GR ++ + + ++D+ R G++D ++ L MP K + + W
Sbjct: 354 NGDLASGRMIHCYIKDNFS-DPGVTLLNSLLDMYARCGQVDTSISLFTEMPNK-NTISWN 411
Query: 375 ALLGACRTHG 404
L+GA HG
Sbjct: 412 VLIGALAMHG 421
>dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 201 bits (512), Expect = 6e-50
Identities = 94/166 (56%), Positives = 121/166 (72%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
+I +F +MP KN +SW IIGALA+HG EA+ F M ++ PDEITF LLSACSH
Sbjct: 395 SISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACSH 454
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GL++ G+ YF MR +Y + E+EHYACMVDLLGR G L +A+ LI+ MPMKPD+V+WG
Sbjct: 455 GGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWG 514
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
AL+GACR HG V IGK +KQLLEL+ G++VL+SNL Y+ +W
Sbjct: 515 ALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQW 560
Score = 66.6 bits (161), Expect = 3e-09
Identities = 47/136 (34%), Positives = 69/136 (50%)
Frame = +3
Query: 39 PTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGLVDIGR 218
P +N+VSW +IG A G EA LF +M+ +G+ D TF LL CS G +++GR
Sbjct: 170 PHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGR 229
Query: 219 DYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALLGACRT 398
M + V I A +VD+ G+ G L A MP+K ++V W ++L A
Sbjct: 230 LVHCHMLASGSRVDLILGNA-LVDMYGKCGDLWMAHRCFDVMPIK-NVVSWTSMLCALAK 287
Query: 399 HGDVRIGKQILKQLLE 446
HG V + +Q+ E
Sbjct: 288 HGSVDAARDWFEQMPE 303
Score = 62.4 bits (150), Expect = 6e-08
Identities = 37/130 (28%), Positives = 66/130 (50%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A D F +MP +N++SW A+I G E + L+ +M++ G+ PDE+T +LS
Sbjct: 294 ARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQ 353
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
G + GR ++ + + ++D+ R G++D ++ L MP K + + W
Sbjct: 354 NGDLASGRMIHCYIQDSFS-DPGVTVLNSLIDMYARCGQVDTSISLFTEMPNK-NTISWN 411
Query: 375 ALLGACRTHG 404
++GA HG
Sbjct: 412 VIIGALAMHG 421
>ref|XP_004984117.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Setaria italica]
Length = 774
Score = 198 bits (504), Expect = 5e-49
Identities = 94/169 (55%), Positives = 120/169 (71%)
Frame = +3
Query: 6 LGLAIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSA 185
L A+ +F+ MP ++ +W AII L +HG G +A+ LF +MQ EGI PD +TF LL+A
Sbjct: 451 LAEAMLLFDHMPRRSTGTWNAIIAGLGVHGHGAKALDLFSEMQQEGIKPDHVTFVSLLAA 510
Query: 186 CSHCGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIV 365
CSH GLVD GR +F M++VYGIV +HYACMVD+LGR G+LDEA I+GMP+KPD
Sbjct: 511 CSHAGLVDQGRSFFDSMQTVYGIVPIAKHYACMVDMLGRAGQLDEAFEFIQGMPIKPDSA 570
Query: 366 IWGALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
+WGALLGACR HG+V +GK + L EL P G YVL+SN+Y GKW
Sbjct: 571 VWGALLGACRIHGNVEMGKLASQNLCELDPENVGYYVLMSNMYAKIGKW 619
Score = 62.0 bits (149), Expect = 7e-08
Identities = 37/136 (27%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A +F++MP +++ +W A++ L + ++A+ LF +M G+ D +T + +L C
Sbjct: 149 AYRVFDEMPERDVPAWNAMLSGLCRNARAVDAVALFGRMVGLGLDGDAVTLSSVLPMC-- 206
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEI--EHYAC--MVDLLGRGGRLDEAMMLIRGMPMKPDI 362
V +G + VY + H + E + C ++D+ G+ G L+EA + GM ++ D+
Sbjct: 207 ---VLLGDRALALVMHVYAVKHGLDGELFVCNALIDVYGKLGMLEEAQWVFDGMALR-DL 262
Query: 363 VIWGALLGACRTHGDV 410
V W +++ A G V
Sbjct: 263 VTWNSIISAYEQGGKV 278
Score = 58.9 bits (141), Expect = 6e-07
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Frame = +3
Query: 24 IFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQA-EGICPDEITFTLLLSACSHCG 200
+F+ +++VSW +I +G EAI + MQ EG+ P + TF +L A S+ G
Sbjct: 355 VFDNFLARDVVSWNTLITGYMQNGLSNEAINAYNHMQKHEGLKPVQGTFVSVLPAYSNLG 414
Query: 201 LVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGAL 380
+ G + + G+ ++ C++DL + G+L EAM+L MP + W A+
Sbjct: 415 ALQQGMR-MHALSIKTGLNLDVYVSTCLIDLYAKCGKLAEAMLLFDHMPRR-STGTWNAI 472
Query: 381 LGACRTHGDVRIGKQILKQLLELKPSG 461
+ HG G + L E++ G
Sbjct: 473 IAGLGVHGH---GAKALDLFSEMQQEG 496
>ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 197 bits (500), Expect = 1e-48
Identities = 91/166 (54%), Positives = 119/166 (71%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
AI +F +MP KN++SW IIGALA+HG E + F M ++ PDEITF LLSACSH
Sbjct: 401 AIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSACSH 460
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GL++ G YF M VY + E+EHY CMVDLLGR G L +A+ LI+ M +KPD+V+WG
Sbjct: 461 GGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWG 520
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
ALLGACR HG+V IGK ++KQLLEL+ G++VL+ NL+Y+ +W
Sbjct: 521 ALLGACRIHGNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQW 566
Score = 68.9 bits (167), Expect = 6e-10
Identities = 41/128 (32%), Positives = 67/128 (52%)
Frame = +3
Query: 21 DIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCG 200
D F +MP +N+VSW A+I G E + L+ +M++ GI PDE T +LSAC G
Sbjct: 302 DWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNG 361
Query: 201 LVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGAL 380
+ G+ +R + + ++D+ R G++D A+ L MP K +++ W +
Sbjct: 362 DLASGKMIHCYVRDNFN-DPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNK-NVISWNVI 419
Query: 381 LGACRTHG 404
+GA HG
Sbjct: 420 IGALAMHG 427
Score = 63.2 bits (152), Expect = 3e-08
Identities = 47/140 (33%), Positives = 70/140 (50%)
Frame = +3
Query: 27 FNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHCGLV 206
F +M +N+VSW +IG A G EA LF +M+ +G+ D T LL ACS G +
Sbjct: 172 FGEMADRNVVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNL 231
Query: 207 DIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWGALLG 386
++GR M V I A ++D+ G+ G L A MP+K ++V W ++L
Sbjct: 232 EVGRLVHCHMLVSGSRVDRILGNA-LLDMYGKCGDLWMAHRCFDMMPIK-NVVTWTSMLC 289
Query: 387 ACRTHGDVRIGKQILKQLLE 446
A HG V + +Q+ E
Sbjct: 290 AQAKHGSVDAVRDWFEQMPE 309
>ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g29230 gi|9293916|dbj|BAB01819.1| unnamed protein
product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 196 bits (499), Expect = 2e-48
Identities = 89/166 (53%), Positives = 121/166 (72%)
Frame = +3
Query: 15 AIDIFNKMPTKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSH 194
A D+FN +P K+LVSW ++ L +HG G EAI+LF +M+ EGI PD++TF +L +C+H
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNH 428
Query: 195 CGLVDIGRDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GL+D G DYFY M VY +V ++EHY C+VDLLGR GRL EA+ +++ MPM+P++VIWG
Sbjct: 429 AGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWG 488
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSGSGVYVLLSNLYYDAGKW 512
ALLGACR H +V I K++L L++L P G Y LLSN+Y A W
Sbjct: 489 ALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDW 534
Score = 58.9 bits (141), Expect = 6e-07
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Frame = +3
Query: 24 IFNKMP--TKNLVSWKAIIGALALHGCGLEAIKLFEKMQAEGICPDEITFTLLLSACSHC 197
+F+KMP KN+V+W II A G EA +L ++M A G+ D +L+AC+
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 198 GLVDIG-RDYFYKMRSVYGIVHEIEHYACMVDLLGRGGRLDEAMMLIRGMPMKPDIVIWG 374
GL+ +G R + RS G + + ++D+ + G L +A + +P K D+V W
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLN--ALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWN 385
Query: 375 ALLGACRTHGDVRIGKQILKQLLELKPSG 461
+L HG GK+ ++ ++ G
Sbjct: 386 TMLHGLGVHGH---GKEAIELFSRMRREG 411