BLASTX nr result

ID: Jatropha_contig00001877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00001877
         (554 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002720155.1| ycf2 [Jatropha curcas] gi|225544184|ref|YP_0...   339   5e-95
ref|YP_001671726.1| Ycf2 [Carica papaya] gi|167391866|ref|YP_001...   336   3e-93
ref|YP_004327722.1| hypothetical chloroplast RF2 [Hevea brasilie...   333   4e-93
ref|YP_004072505.1| Ycf2 protein [Corynocarpus laevigata] gi|317...   335   6e-93
gb|AEK71433.1| hypothetical chloroplast RF2 [Carica papaya]           334   1e-92
ref|YP_005090221.1| ycf2 gene product (chloroplast) [Ricinus com...   332   2e-92
gb|AEK71557.1| hypothetical chloroplast RF2 [Quillaja saponaria]      331   1e-91
gb|ABQ14899.1| Ycf2 [Peridiscus lucidus]                              329   4e-91
ref|YP_006503485.1| Ycf2 (chloroplast) [Gossypium capitis-viridi...   328   9e-91
ref|YP_538978.1| Ycf2 [Gossypium hirsutum] gi|91208964|ref|YP_53...   328   9e-91
gb|ADZ74778.1| hypothetical chloroplast RF21 [Gossypium sturtianum]   328   9e-91
gb|ADZ74520.1| hypothetical chloroplast RF21 [Gossypium herbaceu...   328   9e-91
gb|ADZ74432.1| hypothetical chloroplast RF21 [Gossypium bickii] ...   328   9e-91
ref|YP_006503651.1| Ycf2 (chloroplast) [Gossypium robinsonii] gi...   328   9e-91
ref|YP_006503402.1| Ycf2 (chloroplast) [Gossypium somalense] gi|...   328   9e-91
ref|YP_006503319.1| Ycf2 (chloroplast) [Gossypium incanum] gi|39...   328   9e-91
gb|AEB90554.1| Ycf2 (chloroplast) [Gossypium hirsutum] gi|329317...   328   9e-91
ref|YP_006303533.1| Ycf2 (chloroplast) [Gossypium gossypioides] ...   328   9e-91
ref|YP_005088322.1| Ycf2 (chloroplast) [Gossypium tomentosum] gi...   328   9e-91
ref|YP_005088418.1| Ycf2 (chloroplast) [Gossypium herbaceum subs...   328   9e-91

>ref|YP_002720155.1| ycf2 [Jatropha curcas] gi|225544184|ref|YP_002720174.1| ycf2
            [Jatropha curcas] gi|224979607|gb|ACN72734.1| ycf2
            [Jatropha curcas] gi|224979625|gb|ACN72752.1| ycf2
            [Jatropha curcas]
          Length = 2298

 Score =  339 bits (870), Expect(2) = 5e-95
 Identities = 167/173 (96%), Positives = 169/173 (97%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP
Sbjct: 1235 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 1294

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1295 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1354

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1355 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1407



 Score = 34.7 bits (78), Expect(2) = 5e-95
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGDFL
Sbjct: 1401 FWLKNLFLVALEQLGDFL 1418


>ref|YP_001671726.1| Ycf2 [Carica papaya] gi|167391866|ref|YP_001671743.1| Ycf2 [Carica
            papaya] gi|205412850|sp|B1A978.1|YCF2_CARPA RecName:
            Full=Protein ycf2 gi|166344176|gb|ABY86826.1| Ycf2
            [Carica papaya] gi|166344193|gb|ABY86843.1| Ycf2 [Carica
            papaya]
          Length = 2298

 Score =  336 bits (862), Expect(2) = 3e-93
 Identities = 166/173 (95%), Positives = 168/173 (97%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP
Sbjct: 1239 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 1298

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHNLLLSEEMIHRNNE PLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1299 QWNLISEISSKCLHNLLLSEEMIHRNNESPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1358

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1359 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1411



 Score = 31.6 bits (70), Expect(2) = 3e-93
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1405 FWLKNLFLVALEQLGDSL 1422


>ref|YP_004327722.1| hypothetical chloroplast RF2 [Hevea brasiliensis]
            gi|326909454|ref|YP_004327705.1| hypothetical chloroplast
            RF2 [Hevea brasiliensis] gi|308523548|gb|ADO33598.1|
            hypothetical chloroplast RF2 [Hevea brasiliensis]
            gi|308523568|gb|ADO33618.1| hypothetical chloroplast RF2
            [Hevea brasiliensis]
          Length = 2303

 Score =  333 bits (853), Expect(2) = 4e-93
 Identities = 165/173 (95%), Positives = 167/173 (96%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1238 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1297

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1298 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1357

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THL FVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1358 THLFFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1410



 Score = 34.7 bits (78), Expect(2) = 4e-93
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGDFL
Sbjct: 1404 FWLKNLFLVALEQLGDFL 1421


>ref|YP_004072505.1| Ycf2 protein [Corynocarpus laevigata]
            gi|317046232|ref|YP_004072521.1| Ycf2 protein
            [Corynocarpus laevigata] gi|309252933|gb|ADO60353.1| Ycf2
            protein [Corynocarpus laevigata]
            gi|309252949|gb|ADO60369.1| Ycf2 protein [Corynocarpus
            laevigata]
          Length = 2316

 Score =  335 bits (860), Expect(2) = 6e-93
 Identities = 165/173 (95%), Positives = 168/173 (97%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP
Sbjct: 1249 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 1308

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHNLLLSEEMIHRNNE PLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1309 QWNLISEISSKCLHNLLLSEEMIHRNNESPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1368

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRK+LDRYPTSEL SFWL+  F
Sbjct: 1369 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKILDRYPTSELNSFWLKNLF 1421



 Score = 31.6 bits (70), Expect(2) = 6e-93
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1415 FWLKNLFLVALEQLGDSL 1432


>gb|AEK71433.1| hypothetical chloroplast RF2 [Carica papaya]
          Length = 2276

 Score =  334 bits (857), Expect(2) = 1e-92
 Identities = 165/173 (95%), Positives = 167/173 (96%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSD LPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP
Sbjct: 1230 YMPWFLTSTGYKYLNLIFLDTFSDXLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 1289

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHNLLLSEEMIHRNNE PLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1290 QWNLISEISSKCLHNLLLSEEMIHRNNESPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1349

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1350 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1402



 Score = 31.6 bits (70), Expect(2) = 1e-92
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1396 FWLKNLFLVALEQLGDSL 1413


>ref|YP_005090221.1| ycf2 gene product (chloroplast) [Ricinus communis]
            gi|372450201|ref|YP_005090239.1| ycf2 gene product
            (chloroplast) [Ricinus communis]
            gi|339516209|gb|AEJ82599.1| Ycf2 [Ricinus communis]
            gi|339516227|gb|AEJ82617.1| Ycf2 [Ricinus communis]
          Length = 2286

 Score =  332 bits (851), Expect(2) = 2e-92
 Identities = 164/173 (94%), Positives = 168/173 (97%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY +L+L+FLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1239 YMPWFLTSTGYKFLNLLFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1298

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1299 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1358

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1359 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1411



 Score = 33.5 bits (75), Expect(2) = 2e-92
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLV+LEQLGDFL
Sbjct: 1405 FWLKNLFLVSLEQLGDFL 1422


>gb|AEK71557.1| hypothetical chloroplast RF2 [Quillaja saponaria]
          Length = 2258

 Score =  331 bits (849), Expect(2) = 1e-91
 Identities = 163/173 (94%), Positives = 167/173 (96%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            Y+PWFLTSTGY YL+LIFLDTFSD LPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP
Sbjct: 1228 YIPWFLTSTGYKYLNLIFLDTFSDXLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 1287

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHNLLLSEE+IHRNNE PLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1288 QWNLISEISSKCLHNLLLSEEIIHRNNESPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1347

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1348 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1400



 Score = 31.6 bits (70), Expect(2) = 1e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1394 FWLKNLFLVALEQLGDSL 1411


>gb|ABQ14899.1| Ycf2 [Peridiscus lucidus]
          Length = 2286

 Score =  329 bits (844), Expect(2) = 4e-91
 Identities = 164/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1235 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1294

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEIS KCLHNLLLSEEMIHRNNE PLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1295 QWNLISEISRKCLHNLLLSEEMIHRNNESPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1354

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1355 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1407



 Score = 31.6 bits (70), Expect(2) = 4e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1401 FWLKNLFLVALEQLGDSL 1418


>ref|YP_006503485.1| Ycf2 (chloroplast) [Gossypium capitis-viridis]
            gi|394830856|ref|YP_006503502.1| Ycf2 (chloroplast)
            [Gossypium capitis-viridis] gi|326457080|gb|ADZ74344.1|
            hypothetical chloroplast RF21 [Gossypium anomalum]
            gi|326457105|gb|ADZ74369.1| hypothetical chloroplast RF21
            [Gossypium anomalum] gi|335354540|gb|AEH43158.1| Ycf2
            (chloroplast) [Gossypium capitis-viridis]
            gi|335354556|gb|AEH43174.1| Ycf2 (chloroplast) [Gossypium
            capitis-viridis]
          Length = 2302

 Score =  328 bits (841), Expect(2) = 9e-91
 Identities = 163/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409



 Score = 31.6 bits (70), Expect(2) = 9e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420


>ref|YP_538978.1| Ycf2 [Gossypium hirsutum] gi|91208964|ref|YP_538997.1| Ycf2
            [Gossypium hirsutum] gi|372291071|ref|YP_005087831.1|
            Ycf2 (chloroplast) [Gossypium darwinii]
            gi|372291087|ref|YP_005087848.1| Ycf2 (chloroplast)
            [Gossypium darwinii] gi|372291814|ref|YP_005088958.1|
            Ycf2 (chloroplast) [Gossypium mustelinum]
            gi|372291829|ref|YP_005088975.1| Ycf2 (chloroplast)
            [Gossypium mustelinum]
            gi|109896299|sp|Q2L949.1|YCF2_GOSHI RecName: Full=Protein
            ycf2 gi|85687457|gb|ABC73669.1| hypothetical chloroplast
            RF2 [Gossypium hirsutum] gi|85687478|gb|ABC73690.1|
            hypothetical chloroplast RF2 [Gossypium hirsutum]
            gi|318084439|gb|ADV38914.1| Ycf2 (chloroplast) [Gossypium
            darwinii] gi|318084455|gb|ADV38930.1| Ycf2 (chloroplast)
            [Gossypium darwinii] gi|318084609|gb|ADV39082.1| Ycf2
            (chloroplast) [Gossypium mustelinum]
            gi|318084624|gb|ADV39097.1| Ycf2 (chloroplast) [Gossypium
            mustelinum] gi|329317280|gb|AEB90637.1| ycf2
            (chloroplast) [Gossypium hirsutum]
            gi|329317296|gb|AEB90653.1| Ycf2 (chloroplast) [Gossypium
            hirsutum] gi|329317364|gb|AEB90720.1| ycf2 (chloroplast)
            [Gossypium barbadense] gi|329317380|gb|AEB90736.1| Ycf2
            (chloroplast) [Gossypium barbadense]
            gi|329317448|gb|AEB90803.1| Ycf2 (chloroplast) [Gossypium
            barbadense] gi|329317464|gb|AEB90819.1| Ycf2
            (chloroplast) [Gossypium barbadense]
            gi|329317532|gb|AEB90886.1| ycf2 (chloroplast) [Gossypium
            barbadense] gi|329317548|gb|AEB90902.1| Ycf2
            (chloroplast) [Gossypium barbadense]
          Length = 2298

 Score =  328 bits (841), Expect(2) = 9e-91
 Identities = 163/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1235 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1294

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1295 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1354

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1355 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1407



 Score = 31.6 bits (70), Expect(2) = 9e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1401 FWLKNLFLVALEQLGDSL 1418


>gb|ADZ74778.1| hypothetical chloroplast RF21 [Gossypium sturtianum]
          Length = 2298

 Score =  328 bits (841), Expect(2) = 9e-91
 Identities = 163/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409



 Score = 31.6 bits (70), Expect(2) = 9e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420


>gb|ADZ74520.1| hypothetical chloroplast RF21 [Gossypium herbaceum]
            gi|326457279|gb|ADZ74541.1| hypothetical chloroplast RF21
            [Gossypium herbaceum]
          Length = 2298

 Score =  328 bits (841), Expect(2) = 9e-91
 Identities = 163/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409



 Score = 31.6 bits (70), Expect(2) = 9e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420


>gb|ADZ74432.1| hypothetical chloroplast RF21 [Gossypium bickii]
            gi|326457193|gb|ADZ74456.1| hypothetical chloroplast RF21
            [Gossypium bickii]
          Length = 2298

 Score =  328 bits (841), Expect(2) = 9e-91
 Identities = 163/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409



 Score = 31.6 bits (70), Expect(2) = 9e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420


>ref|YP_006503651.1| Ycf2 (chloroplast) [Gossypium robinsonii]
            gi|394831032|ref|YP_006503668.1| Ycf2 (chloroplast)
            [Gossypium robinsonii] gi|335354708|gb|AEH43324.1| Ycf2
            [Gossypium robinsonii] gi|335354724|gb|AEH43340.1| Ycf2
            [Gossypium robinsonii]
          Length = 2298

 Score =  328 bits (841), Expect(2) = 9e-91
 Identities = 163/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409



 Score = 31.6 bits (70), Expect(2) = 9e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420


>ref|YP_006503402.1| Ycf2 (chloroplast) [Gossypium somalense]
            gi|394830770|ref|YP_006503419.1| Ycf2 (chloroplast)
            [Gossypium somalense] gi|394830929|ref|YP_006503568.1|
            Ycf2 (chloroplast) [Gossypium areysianum]
            gi|394830945|ref|YP_006503585.1| Ycf2 (chloroplast)
            [Gossypium areysianum] gi|335354456|gb|AEH43075.1| Ycf2
            [Gossypium somalense] gi|335354472|gb|AEH43091.1| Ycf2
            [Gossypium somalense] gi|335354624|gb|AEH43241.1| Ycf2
            (chloroplast) [Gossypium areysianum]
            gi|335354640|gb|AEH43257.1| Ycf2 (chloroplast) [Gossypium
            areysianum]
          Length = 2298

 Score =  328 bits (841), Expect(2) = 9e-91
 Identities = 163/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409



 Score = 31.6 bits (70), Expect(2) = 9e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420


>ref|YP_006503319.1| Ycf2 (chloroplast) [Gossypium incanum]
            gi|394830683|ref|YP_006503336.1| Ycf2 (chloroplast)
            [Gossypium incanum] gi|335354372|gb|AEH42992.1| Ycf2
            [Gossypium incanum] gi|335354388|gb|AEH43008.1| Ycf2
            [Gossypium incanum]
          Length = 2298

 Score =  328 bits (841), Expect(2) = 9e-91
 Identities = 163/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409



 Score = 31.6 bits (70), Expect(2) = 9e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420


>gb|AEB90554.1| Ycf2 (chloroplast) [Gossypium hirsutum] gi|329317212|gb|AEB90570.1|
            Ycf2 (chloroplast) [Gossypium hirsutum]
          Length = 2298

 Score =  328 bits (841), Expect(2) = 9e-91
 Identities = 163/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1235 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1294

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1295 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1354

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1355 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1407



 Score = 31.6 bits (70), Expect(2) = 9e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1401 FWLKNLFLVALEQLGDSL 1418


>ref|YP_006303533.1| Ycf2 (chloroplast) [Gossypium gossypioides]
            gi|386800894|ref|YP_006303550.1| Ycf2 (chloroplast)
            [Gossypium gossypioides] gi|329317112|gb|AEB90471.1| Ycf2
            (chloroplast) [Gossypium gossypioides]
            gi|329317128|gb|AEB90487.1| Ycf2 (chloroplast) [Gossypium
            gossypioides]
          Length = 2298

 Score =  328 bits (841), Expect(2) = 9e-91
 Identities = 163/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409



 Score = 31.6 bits (70), Expect(2) = 9e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420


>ref|YP_005088322.1| Ycf2 (chloroplast) [Gossypium tomentosum]
            gi|372291443|ref|YP_005088339.1| Ycf2 (chloroplast)
            [Gossypium tomentosum] gi|318084777|gb|ADV39248.1| Ycf2
            (chloroplast) [Gossypium tomentosum]
            gi|318084794|gb|ADV39265.1| Ycf2 (chloroplast) [Gossypium
            tomentosum]
          Length = 2298

 Score =  328 bits (841), Expect(2) = 9e-91
 Identities = 163/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1235 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1294

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1295 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1354

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1355 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1407



 Score = 31.6 bits (70), Expect(2) = 9e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1401 FWLKNLFLVALEQLGDSL 1418


>ref|YP_005088418.1| Ycf2 (chloroplast) [Gossypium herbaceum subsp. africanum]
            gi|372291541|ref|YP_005088435.1| Ycf2 (chloroplast)
            [Gossypium herbaceum subsp. africanum]
            gi|372291898|ref|YP_005089041.1| Ycf2 (chloroplast)
            [Gossypium arboreum] gi|372291913|ref|YP_005089058.1|
            Ycf2 (chloroplast) [Gossypium arboreum]
            gi|318084357|gb|ADV38833.1| Ycf2 (chloroplast) [Gossypium
            arboreum] gi|318084372|gb|ADV38848.1| Ycf2 (chloroplast)
            [Gossypium arboreum] gi|318084525|gb|ADV38999.1| Ycf2
            (chloroplast) [Gossypium herbaceum subsp. africanum]
            gi|318084542|gb|ADV39016.1| Ycf2 (chloroplast) [Gossypium
            herbaceum subsp. africanum]
          Length = 2298

 Score =  328 bits (841), Expect(2) = 9e-91
 Identities = 163/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 552  YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
            YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296

Query: 372  QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
            QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356

Query: 192  THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
            THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+  F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409



 Score = 31.6 bits (70), Expect(2) = 9e-91
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 55   FLVKNLFLVALEQLGDFL 2
            F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420