BLASTX nr result
ID: Jatropha_contig00001877
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00001877
(554 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002720155.1| ycf2 [Jatropha curcas] gi|225544184|ref|YP_0... 339 5e-95
ref|YP_001671726.1| Ycf2 [Carica papaya] gi|167391866|ref|YP_001... 336 3e-93
ref|YP_004327722.1| hypothetical chloroplast RF2 [Hevea brasilie... 333 4e-93
ref|YP_004072505.1| Ycf2 protein [Corynocarpus laevigata] gi|317... 335 6e-93
gb|AEK71433.1| hypothetical chloroplast RF2 [Carica papaya] 334 1e-92
ref|YP_005090221.1| ycf2 gene product (chloroplast) [Ricinus com... 332 2e-92
gb|AEK71557.1| hypothetical chloroplast RF2 [Quillaja saponaria] 331 1e-91
gb|ABQ14899.1| Ycf2 [Peridiscus lucidus] 329 4e-91
ref|YP_006503485.1| Ycf2 (chloroplast) [Gossypium capitis-viridi... 328 9e-91
ref|YP_538978.1| Ycf2 [Gossypium hirsutum] gi|91208964|ref|YP_53... 328 9e-91
gb|ADZ74778.1| hypothetical chloroplast RF21 [Gossypium sturtianum] 328 9e-91
gb|ADZ74520.1| hypothetical chloroplast RF21 [Gossypium herbaceu... 328 9e-91
gb|ADZ74432.1| hypothetical chloroplast RF21 [Gossypium bickii] ... 328 9e-91
ref|YP_006503651.1| Ycf2 (chloroplast) [Gossypium robinsonii] gi... 328 9e-91
ref|YP_006503402.1| Ycf2 (chloroplast) [Gossypium somalense] gi|... 328 9e-91
ref|YP_006503319.1| Ycf2 (chloroplast) [Gossypium incanum] gi|39... 328 9e-91
gb|AEB90554.1| Ycf2 (chloroplast) [Gossypium hirsutum] gi|329317... 328 9e-91
ref|YP_006303533.1| Ycf2 (chloroplast) [Gossypium gossypioides] ... 328 9e-91
ref|YP_005088322.1| Ycf2 (chloroplast) [Gossypium tomentosum] gi... 328 9e-91
ref|YP_005088418.1| Ycf2 (chloroplast) [Gossypium herbaceum subs... 328 9e-91
>ref|YP_002720155.1| ycf2 [Jatropha curcas] gi|225544184|ref|YP_002720174.1| ycf2
[Jatropha curcas] gi|224979607|gb|ACN72734.1| ycf2
[Jatropha curcas] gi|224979625|gb|ACN72752.1| ycf2
[Jatropha curcas]
Length = 2298
Score = 339 bits (870), Expect(2) = 5e-95
Identities = 167/173 (96%), Positives = 169/173 (97%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP
Sbjct: 1235 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 1294
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1295 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1354
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1355 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1407
Score = 34.7 bits (78), Expect(2) = 5e-95
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGDFL
Sbjct: 1401 FWLKNLFLVALEQLGDFL 1418
>ref|YP_001671726.1| Ycf2 [Carica papaya] gi|167391866|ref|YP_001671743.1| Ycf2 [Carica
papaya] gi|205412850|sp|B1A978.1|YCF2_CARPA RecName:
Full=Protein ycf2 gi|166344176|gb|ABY86826.1| Ycf2
[Carica papaya] gi|166344193|gb|ABY86843.1| Ycf2 [Carica
papaya]
Length = 2298
Score = 336 bits (862), Expect(2) = 3e-93
Identities = 166/173 (95%), Positives = 168/173 (97%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP
Sbjct: 1239 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 1298
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHNLLLSEEMIHRNNE PLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1299 QWNLISEISSKCLHNLLLSEEMIHRNNESPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1358
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1359 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1411
Score = 31.6 bits (70), Expect(2) = 3e-93
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1405 FWLKNLFLVALEQLGDSL 1422
>ref|YP_004327722.1| hypothetical chloroplast RF2 [Hevea brasiliensis]
gi|326909454|ref|YP_004327705.1| hypothetical chloroplast
RF2 [Hevea brasiliensis] gi|308523548|gb|ADO33598.1|
hypothetical chloroplast RF2 [Hevea brasiliensis]
gi|308523568|gb|ADO33618.1| hypothetical chloroplast RF2
[Hevea brasiliensis]
Length = 2303
Score = 333 bits (853), Expect(2) = 4e-93
Identities = 165/173 (95%), Positives = 167/173 (96%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1238 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1297
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1298 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1357
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THL FVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1358 THLFFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1410
Score = 34.7 bits (78), Expect(2) = 4e-93
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGDFL
Sbjct: 1404 FWLKNLFLVALEQLGDFL 1421
>ref|YP_004072505.1| Ycf2 protein [Corynocarpus laevigata]
gi|317046232|ref|YP_004072521.1| Ycf2 protein
[Corynocarpus laevigata] gi|309252933|gb|ADO60353.1| Ycf2
protein [Corynocarpus laevigata]
gi|309252949|gb|ADO60369.1| Ycf2 protein [Corynocarpus
laevigata]
Length = 2316
Score = 335 bits (860), Expect(2) = 6e-93
Identities = 165/173 (95%), Positives = 168/173 (97%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP
Sbjct: 1249 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 1308
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHNLLLSEEMIHRNNE PLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1309 QWNLISEISSKCLHNLLLSEEMIHRNNESPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1368
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRK+LDRYPTSEL SFWL+ F
Sbjct: 1369 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKILDRYPTSELNSFWLKNLF 1421
Score = 31.6 bits (70), Expect(2) = 6e-93
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1415 FWLKNLFLVALEQLGDSL 1432
>gb|AEK71433.1| hypothetical chloroplast RF2 [Carica papaya]
Length = 2276
Score = 334 bits (857), Expect(2) = 1e-92
Identities = 165/173 (95%), Positives = 167/173 (96%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSD LPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP
Sbjct: 1230 YMPWFLTSTGYKYLNLIFLDTFSDXLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 1289
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHNLLLSEEMIHRNNE PLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1290 QWNLISEISSKCLHNLLLSEEMIHRNNESPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1349
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1350 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1402
Score = 31.6 bits (70), Expect(2) = 1e-92
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1396 FWLKNLFLVALEQLGDSL 1413
>ref|YP_005090221.1| ycf2 gene product (chloroplast) [Ricinus communis]
gi|372450201|ref|YP_005090239.1| ycf2 gene product
(chloroplast) [Ricinus communis]
gi|339516209|gb|AEJ82599.1| Ycf2 [Ricinus communis]
gi|339516227|gb|AEJ82617.1| Ycf2 [Ricinus communis]
Length = 2286
Score = 332 bits (851), Expect(2) = 2e-92
Identities = 164/173 (94%), Positives = 168/173 (97%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY +L+L+FLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1239 YMPWFLTSTGYKFLNLLFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1298
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1299 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1358
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1359 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1411
Score = 33.5 bits (75), Expect(2) = 2e-92
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLV+LEQLGDFL
Sbjct: 1405 FWLKNLFLVSLEQLGDFL 1422
>gb|AEK71557.1| hypothetical chloroplast RF2 [Quillaja saponaria]
Length = 2258
Score = 331 bits (849), Expect(2) = 1e-91
Identities = 163/173 (94%), Positives = 167/173 (96%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
Y+PWFLTSTGY YL+LIFLDTFSD LPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP
Sbjct: 1228 YIPWFLTSTGYKYLNLIFLDTFSDXLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 1287
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHNLLLSEE+IHRNNE PLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1288 QWNLISEISSKCLHNLLLSEEIIHRNNESPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1347
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1348 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1400
Score = 31.6 bits (70), Expect(2) = 1e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1394 FWLKNLFLVALEQLGDSL 1411
>gb|ABQ14899.1| Ycf2 [Peridiscus lucidus]
Length = 2286
Score = 329 bits (844), Expect(2) = 4e-91
Identities = 164/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1235 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1294
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEIS KCLHNLLLSEEMIHRNNE PLISTHLRSPNVREFLYSILFLLLVAGYLVR
Sbjct: 1295 QWNLISEISRKCLHNLLLSEEMIHRNNESPLISTHLRSPNVREFLYSILFLLLVAGYLVR 1354
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1355 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1407
Score = 31.6 bits (70), Expect(2) = 4e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1401 FWLKNLFLVALEQLGDSL 1418
>ref|YP_006503485.1| Ycf2 (chloroplast) [Gossypium capitis-viridis]
gi|394830856|ref|YP_006503502.1| Ycf2 (chloroplast)
[Gossypium capitis-viridis] gi|326457080|gb|ADZ74344.1|
hypothetical chloroplast RF21 [Gossypium anomalum]
gi|326457105|gb|ADZ74369.1| hypothetical chloroplast RF21
[Gossypium anomalum] gi|335354540|gb|AEH43158.1| Ycf2
(chloroplast) [Gossypium capitis-viridis]
gi|335354556|gb|AEH43174.1| Ycf2 (chloroplast) [Gossypium
capitis-viridis]
Length = 2302
Score = 328 bits (841), Expect(2) = 9e-91
Identities = 163/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409
Score = 31.6 bits (70), Expect(2) = 9e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420
>ref|YP_538978.1| Ycf2 [Gossypium hirsutum] gi|91208964|ref|YP_538997.1| Ycf2
[Gossypium hirsutum] gi|372291071|ref|YP_005087831.1|
Ycf2 (chloroplast) [Gossypium darwinii]
gi|372291087|ref|YP_005087848.1| Ycf2 (chloroplast)
[Gossypium darwinii] gi|372291814|ref|YP_005088958.1|
Ycf2 (chloroplast) [Gossypium mustelinum]
gi|372291829|ref|YP_005088975.1| Ycf2 (chloroplast)
[Gossypium mustelinum]
gi|109896299|sp|Q2L949.1|YCF2_GOSHI RecName: Full=Protein
ycf2 gi|85687457|gb|ABC73669.1| hypothetical chloroplast
RF2 [Gossypium hirsutum] gi|85687478|gb|ABC73690.1|
hypothetical chloroplast RF2 [Gossypium hirsutum]
gi|318084439|gb|ADV38914.1| Ycf2 (chloroplast) [Gossypium
darwinii] gi|318084455|gb|ADV38930.1| Ycf2 (chloroplast)
[Gossypium darwinii] gi|318084609|gb|ADV39082.1| Ycf2
(chloroplast) [Gossypium mustelinum]
gi|318084624|gb|ADV39097.1| Ycf2 (chloroplast) [Gossypium
mustelinum] gi|329317280|gb|AEB90637.1| ycf2
(chloroplast) [Gossypium hirsutum]
gi|329317296|gb|AEB90653.1| Ycf2 (chloroplast) [Gossypium
hirsutum] gi|329317364|gb|AEB90720.1| ycf2 (chloroplast)
[Gossypium barbadense] gi|329317380|gb|AEB90736.1| Ycf2
(chloroplast) [Gossypium barbadense]
gi|329317448|gb|AEB90803.1| Ycf2 (chloroplast) [Gossypium
barbadense] gi|329317464|gb|AEB90819.1| Ycf2
(chloroplast) [Gossypium barbadense]
gi|329317532|gb|AEB90886.1| ycf2 (chloroplast) [Gossypium
barbadense] gi|329317548|gb|AEB90902.1| Ycf2
(chloroplast) [Gossypium barbadense]
Length = 2298
Score = 328 bits (841), Expect(2) = 9e-91
Identities = 163/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1235 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1294
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1295 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1354
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1355 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1407
Score = 31.6 bits (70), Expect(2) = 9e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1401 FWLKNLFLVALEQLGDSL 1418
>gb|ADZ74778.1| hypothetical chloroplast RF21 [Gossypium sturtianum]
Length = 2298
Score = 328 bits (841), Expect(2) = 9e-91
Identities = 163/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409
Score = 31.6 bits (70), Expect(2) = 9e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420
>gb|ADZ74520.1| hypothetical chloroplast RF21 [Gossypium herbaceum]
gi|326457279|gb|ADZ74541.1| hypothetical chloroplast RF21
[Gossypium herbaceum]
Length = 2298
Score = 328 bits (841), Expect(2) = 9e-91
Identities = 163/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409
Score = 31.6 bits (70), Expect(2) = 9e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420
>gb|ADZ74432.1| hypothetical chloroplast RF21 [Gossypium bickii]
gi|326457193|gb|ADZ74456.1| hypothetical chloroplast RF21
[Gossypium bickii]
Length = 2298
Score = 328 bits (841), Expect(2) = 9e-91
Identities = 163/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409
Score = 31.6 bits (70), Expect(2) = 9e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420
>ref|YP_006503651.1| Ycf2 (chloroplast) [Gossypium robinsonii]
gi|394831032|ref|YP_006503668.1| Ycf2 (chloroplast)
[Gossypium robinsonii] gi|335354708|gb|AEH43324.1| Ycf2
[Gossypium robinsonii] gi|335354724|gb|AEH43340.1| Ycf2
[Gossypium robinsonii]
Length = 2298
Score = 328 bits (841), Expect(2) = 9e-91
Identities = 163/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409
Score = 31.6 bits (70), Expect(2) = 9e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420
>ref|YP_006503402.1| Ycf2 (chloroplast) [Gossypium somalense]
gi|394830770|ref|YP_006503419.1| Ycf2 (chloroplast)
[Gossypium somalense] gi|394830929|ref|YP_006503568.1|
Ycf2 (chloroplast) [Gossypium areysianum]
gi|394830945|ref|YP_006503585.1| Ycf2 (chloroplast)
[Gossypium areysianum] gi|335354456|gb|AEH43075.1| Ycf2
[Gossypium somalense] gi|335354472|gb|AEH43091.1| Ycf2
[Gossypium somalense] gi|335354624|gb|AEH43241.1| Ycf2
(chloroplast) [Gossypium areysianum]
gi|335354640|gb|AEH43257.1| Ycf2 (chloroplast) [Gossypium
areysianum]
Length = 2298
Score = 328 bits (841), Expect(2) = 9e-91
Identities = 163/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409
Score = 31.6 bits (70), Expect(2) = 9e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420
>ref|YP_006503319.1| Ycf2 (chloroplast) [Gossypium incanum]
gi|394830683|ref|YP_006503336.1| Ycf2 (chloroplast)
[Gossypium incanum] gi|335354372|gb|AEH42992.1| Ycf2
[Gossypium incanum] gi|335354388|gb|AEH43008.1| Ycf2
[Gossypium incanum]
Length = 2298
Score = 328 bits (841), Expect(2) = 9e-91
Identities = 163/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409
Score = 31.6 bits (70), Expect(2) = 9e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420
>gb|AEB90554.1| Ycf2 (chloroplast) [Gossypium hirsutum] gi|329317212|gb|AEB90570.1|
Ycf2 (chloroplast) [Gossypium hirsutum]
Length = 2298
Score = 328 bits (841), Expect(2) = 9e-91
Identities = 163/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1235 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1294
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1295 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1354
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1355 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1407
Score = 31.6 bits (70), Expect(2) = 9e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1401 FWLKNLFLVALEQLGDSL 1418
>ref|YP_006303533.1| Ycf2 (chloroplast) [Gossypium gossypioides]
gi|386800894|ref|YP_006303550.1| Ycf2 (chloroplast)
[Gossypium gossypioides] gi|329317112|gb|AEB90471.1| Ycf2
(chloroplast) [Gossypium gossypioides]
gi|329317128|gb|AEB90487.1| Ycf2 (chloroplast) [Gossypium
gossypioides]
Length = 2298
Score = 328 bits (841), Expect(2) = 9e-91
Identities = 163/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409
Score = 31.6 bits (70), Expect(2) = 9e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420
>ref|YP_005088322.1| Ycf2 (chloroplast) [Gossypium tomentosum]
gi|372291443|ref|YP_005088339.1| Ycf2 (chloroplast)
[Gossypium tomentosum] gi|318084777|gb|ADV39248.1| Ycf2
(chloroplast) [Gossypium tomentosum]
gi|318084794|gb|ADV39265.1| Ycf2 (chloroplast) [Gossypium
tomentosum]
Length = 2298
Score = 328 bits (841), Expect(2) = 9e-91
Identities = 163/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1235 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1294
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1295 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1354
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1355 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1407
Score = 31.6 bits (70), Expect(2) = 9e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1401 FWLKNLFLVALEQLGDSL 1418
>ref|YP_005088418.1| Ycf2 (chloroplast) [Gossypium herbaceum subsp. africanum]
gi|372291541|ref|YP_005088435.1| Ycf2 (chloroplast)
[Gossypium herbaceum subsp. africanum]
gi|372291898|ref|YP_005089041.1| Ycf2 (chloroplast)
[Gossypium arboreum] gi|372291913|ref|YP_005089058.1|
Ycf2 (chloroplast) [Gossypium arboreum]
gi|318084357|gb|ADV38833.1| Ycf2 (chloroplast) [Gossypium
arboreum] gi|318084372|gb|ADV38848.1| Ycf2 (chloroplast)
[Gossypium arboreum] gi|318084525|gb|ADV38999.1| Ycf2
(chloroplast) [Gossypium herbaceum subsp. africanum]
gi|318084542|gb|ADV39016.1| Ycf2 (chloroplast) [Gossypium
herbaceum subsp. africanum]
Length = 2298
Score = 328 bits (841), Expect(2) = 9e-91
Identities = 163/173 (94%), Positives = 166/173 (95%)
Frame = -3
Query: 552 YMPWFLTSTGYLYLDLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKWCLP 373
YMPWFLTSTGY YL+LIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKK CLP
Sbjct: 1237 YMPWFLTSTGYKYLNLIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLP 1296
Query: 372 QWNLISEISSKCLHNLLLSEEMIHRNNEPPLISTHLRSPNVREFLYSILFLLLVAGYLVR 193
QWNLISEISSKCLHN LLSEEMIHRNNE PLISTHLRSPNV+EFLYSILFLLLVAGYLVR
Sbjct: 1297 QWNLISEISSKCLHNFLLSEEMIHRNNESPLISTHLRSPNVQEFLYSILFLLLVAGYLVR 1356
Query: 192 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELTSFWLRISF 34
THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEL SFWL+ F
Sbjct: 1357 THLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLF 1409
Score = 31.6 bits (70), Expect(2) = 9e-91
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 55 FLVKNLFLVALEQLGDFL 2
F +KNLFLVALEQLGD L
Sbjct: 1403 FWLKNLFLVALEQLGDSL 1420