BLASTX nr result

ID: Jatropha_contig00001756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00001756
         (379 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517182.1| conserved hypothetical protein [Ricinus comm...    77   3e-12
ref|XP_002510688.1| conserved hypothetical protein [Ricinus comm...    58   5e-10
ref|XP_002307798.1| predicted protein [Populus trichocarpa] gi|2...    53   3e-08
gb|EOY15291.1| Uncharacterized protein TCM_034405 [Theobroma cacao]    50   1e-06

>ref|XP_002517182.1| conserved hypothetical protein [Ricinus communis]
           gi|223543817|gb|EEF45345.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 244

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/72 (50%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
 Frame = -3

Query: 374 GPPLIEKARKRHLH*KRDL-CRACEDRS*KNVRFAAYTFLSKDPTKVRAFFGYPVDERKE 198
           G  +I++AR+ H++ +R++     +    +++R+ AYTFL++DP +VRAFFGYPV+ERK+
Sbjct: 174 GNAIIDRARQ-HVYSEREVYAELVKIGLERHLRYTAYTFLTQDPVRVRAFFGYPVNERKD 232

Query: 197 FLIQMMYGPEDP 162
           FL+QMMYGP+DP
Sbjct: 233 FLLQMMYGPQDP 244


>ref|XP_002510688.1| conserved hypothetical protein [Ricinus communis]
           gi|223551389|gb|EEF52875.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 321

 Score = 57.8 bits (138), Expect(2) = 5e-10
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = -3

Query: 290 KNVRFAAYTFLSKDPTKVRAFFGYPVDERKEFLIQMMYGPED 165
           +++R+ AYTFL  +  + RAFFG P +ERKEFL+QMMY PED
Sbjct: 279 RHMRYKAYTFLIANAGRARAFFGCPSEERKEFLLQMMYSPED 320



 Score = 31.6 bits (70), Expect(2) = 5e-10
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = -1

Query: 340 IYTEREIYAELVKIGVER 287
           +Y+E+E++ ELVKIGVER
Sbjct: 262 VYSEQEVFTELVKIGVER 279


>ref|XP_002307798.1| predicted protein [Populus trichocarpa] gi|222857247|gb|EEE94794.1|
           hypothetical protein POPTR_0005s27380g [Populus
           trichocarpa]
          Length = 322

 Score = 53.1 bits (126), Expect(2) = 3e-08
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = -3

Query: 287 NVRFAAYTFLSKDPTKVRAFFGYPVDERKEFLIQMMYGPED 165
           ++R+ AYTFL  +  +VRAFFG P  ER+EFL+ MMY P+D
Sbjct: 277 HLRYKAYTFLVANSGRVRAFFGCPPGERREFLLHMMYSPDD 317



 Score = 30.0 bits (66), Expect(2) = 3e-08
 Identities = 11/17 (64%), Positives = 17/17 (100%)
 Frame = -1

Query: 340 IYTEREIYAELVKIGVE 290
           +Y+E+E+++ELVKIGVE
Sbjct: 259 VYSEQEVFSELVKIGVE 275


>gb|EOY15291.1| Uncharacterized protein TCM_034405 [Theobroma cacao]
          Length = 209

 Score = 50.1 bits (118), Expect(2) = 1e-06
 Identities = 23/40 (57%), Positives = 28/40 (70%)
 Frame = -3

Query: 284 VRFAAYTFLSKDPTKVRAFFGYPVDERKEFLIQMMYGPED 165
           +R  AYTFL  +  +VRA FG P +ERKE+L QMMY  ED
Sbjct: 167 LRHKAYTFLIANAARVRALFGCPAEERKEYLSQMMYSSED 206



 Score = 28.1 bits (61), Expect(2) = 1e-06
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -1

Query: 343 VIYTEREIYAELVKIGVE 290
           V Y+E+E++AELV IGV+
Sbjct: 147 VYYSEQEVFAELVNIGVD 164


Top