BLASTX nr result
ID: Jatropha_contig00001637
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Jatropha_contig00001637 (181 letters) Database: NCBI-nr (updated 2014/02/11) 35,149,712 sequences; 12,374,887,350 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAS46143.1| ribosomal protein L36 [Oryza sativa Japonica Grou... 59 5e-07 ref|YP_008757474.1| ribosomal protein L36 (chloroplast) [Oryza r... 59 6e-07 gb|ADD63060.1| ribosomal protein L36 [Potamophila parviflora] 59 6e-07 gb|ADD63126.1| ribosomal protein L36 [Microlaena stipoides] 57 2e-06 >gb|AAS46143.1| ribosomal protein L36 [Oryza sativa Japonica Group] gi|42795641|gb|AAS46206.1| ribosomal protein L36 [Oryza sativa Japonica Group] gi|290790597|gb|ADD62857.1| ribosomal protein L36 [Oryza sativa Japonica Group] gi|290790666|gb|ADD62925.1| ribosomal protein L36 [Oryza meridionalis] gi|290790735|gb|ADD62993.1| ribosomal protein L36 [Oryza australiensis] Length = 70 Score = 59.3 bits (142), Expect = 5e-07 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = -3 Query: 152 HVKKILYF*LFVHRIL*SVFT*KDYPCLCLCLGLKQITIIRPRLRISRHF 3 H + +F ++L S KDYPCLCLC GL+Q+T+IRPRLRISRHF Sbjct: 5 HFRGYFFFYFLESQVLFS----KDYPCLCLCFGLEQMTLIRPRLRISRHF 50 >ref|YP_008757474.1| ribosomal protein L36 (chloroplast) [Oryza rufipogon] gi|552954512|gb|AGY48980.1| ribosomal protein L36 (chloroplast) [Oryza rufipogon] Length = 67 Score = 58.9 bits (141), Expect = 6e-07 Identities = 24/28 (85%), Positives = 27/28 (96%) Frame = -3 Query: 86 KDYPCLCLCLGLKQITIIRPRLRISRHF 3 KDYPCLCLC GL+Q+T+IRPRLRISRHF Sbjct: 20 KDYPCLCLCFGLEQMTLIRPRLRISRHF 47 >gb|ADD63060.1| ribosomal protein L36 [Potamophila parviflora] Length = 70 Score = 58.9 bits (141), Expect = 6e-07 Identities = 24/28 (85%), Positives = 27/28 (96%) Frame = -3 Query: 86 KDYPCLCLCLGLKQITIIRPRLRISRHF 3 KDYPCLCLC GL+Q+T+IRPRLRISRHF Sbjct: 23 KDYPCLCLCFGLEQMTLIRPRLRISRHF 50 >gb|ADD63126.1| ribosomal protein L36 [Microlaena stipoides] Length = 70 Score = 57.4 bits (137), Expect = 2e-06 Identities = 27/50 (54%), Positives = 35/50 (70%) Frame = -3 Query: 152 HVKKILYF*LFVHRIL*SVFT*KDYPCLCLCLGLKQITIIRPRLRISRHF 3 H ++ +F ++L S K YPCLCLC GL+Q+T+IRPRLRISRHF Sbjct: 5 HFREYFFFYFLESKVLFS----KYYPCLCLCFGLEQMTLIRPRLRISRHF 50