BLASTX nr result

ID: Jatropha_contig00001637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00001637
         (181 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS46143.1| ribosomal protein L36 [Oryza sativa Japonica Grou...    59   5e-07
ref|YP_008757474.1| ribosomal protein L36 (chloroplast) [Oryza r...    59   6e-07
gb|ADD63060.1| ribosomal protein L36 [Potamophila parviflora]          59   6e-07
gb|ADD63126.1| ribosomal protein L36 [Microlaena stipoides]            57   2e-06

>gb|AAS46143.1| ribosomal protein L36 [Oryza sativa Japonica Group]
           gi|42795641|gb|AAS46206.1| ribosomal protein L36 [Oryza
           sativa Japonica Group] gi|290790597|gb|ADD62857.1|
           ribosomal protein L36 [Oryza sativa Japonica Group]
           gi|290790666|gb|ADD62925.1| ribosomal protein L36 [Oryza
           meridionalis] gi|290790735|gb|ADD62993.1| ribosomal
           protein L36 [Oryza australiensis]
          Length = 70

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = -3

Query: 152 HVKKILYF*LFVHRIL*SVFT*KDYPCLCLCLGLKQITIIRPRLRISRHF 3
           H +   +F     ++L S    KDYPCLCLC GL+Q+T+IRPRLRISRHF
Sbjct: 5   HFRGYFFFYFLESQVLFS----KDYPCLCLCFGLEQMTLIRPRLRISRHF 50


>ref|YP_008757474.1| ribosomal protein L36 (chloroplast) [Oryza rufipogon]
           gi|552954512|gb|AGY48980.1| ribosomal protein L36
           (chloroplast) [Oryza rufipogon]
          Length = 67

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = -3

Query: 86  KDYPCLCLCLGLKQITIIRPRLRISRHF 3
           KDYPCLCLC GL+Q+T+IRPRLRISRHF
Sbjct: 20  KDYPCLCLCFGLEQMTLIRPRLRISRHF 47


>gb|ADD63060.1| ribosomal protein L36 [Potamophila parviflora]
          Length = 70

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = -3

Query: 86  KDYPCLCLCLGLKQITIIRPRLRISRHF 3
           KDYPCLCLC GL+Q+T+IRPRLRISRHF
Sbjct: 23  KDYPCLCLCFGLEQMTLIRPRLRISRHF 50


>gb|ADD63126.1| ribosomal protein L36 [Microlaena stipoides]
          Length = 70

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = -3

Query: 152 HVKKILYF*LFVHRIL*SVFT*KDYPCLCLCLGLKQITIIRPRLRISRHF 3
           H ++  +F     ++L S    K YPCLCLC GL+Q+T+IRPRLRISRHF
Sbjct: 5   HFREYFFFYFLESKVLFS----KYYPCLCLCFGLEQMTLIRPRLRISRHF 50


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