BLASTX nr result
ID: Jatropha_contig00001535
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00001535
(542 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana] ... 59 3e-16
gb|ESR58767.1| hypothetical protein CICLE_v10004111mg [Citrus cl... 78 1e-12
gb|ESW29322.1| hypothetical protein PHAVU_002G060900g [Phaseolus... 49 3e-11
gb|AFK44984.1| unknown [Medicago truncatula] 48 2e-09
ref|XP_002886888.1| hypothetical protein ARALYDRAFT_475597 [Arab... 51 3e-09
ref|XP_002535497.1| conserved hypothetical protein [Ricinus comm... 65 1e-08
ref|NP_042462.1| ORF54b [Pinus thunbergii] gi|1262702|dbj|BAA044... 49 5e-06
ref|XP_003618685.1| Photosystem I assembly protein ycf3 [Medicag... 56 6e-06
>ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana]
gi|330251116|gb|AEC06210.1| uncharacterized protein
AT2G12905 [Arabidopsis thaliana]
Length = 72
Score = 58.5 bits (140), Expect(2) = 3e-16
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +1
Query: 103 FFIWIGTKKNGWDNKHPSRLYFGYPYNH 186
FF+ IGT +NGW+NKHPSR YFGYPYNH
Sbjct: 45 FFVGIGTNQNGWNNKHPSRSYFGYPYNH 72
Score = 52.0 bits (123), Expect(2) = 3e-16
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 26 TNRRHRGRSTTPRNQQHENFVRNYPFSLF 112
TNRRHRGRSTTPRNQQH+NF++N S F
Sbjct: 16 TNRRHRGRSTTPRNQQHKNFLKNDSLSFF 44
>gb|ESR58767.1| hypothetical protein CICLE_v10004111mg [Citrus clementina]
Length = 58
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/46 (78%), Positives = 36/46 (78%)
Frame = +1
Query: 64 ESTTRKLC*KLSLFFIWIGTKKNGWDNKHPSRLYFGYPYNHRRSLK 201
ES TRKLC KL F IGTKKNGWDNKHPSR Y GYPYNHRR LK
Sbjct: 13 ESATRKLCYKLPPFLSGIGTKKNGWDNKHPSRSYCGYPYNHRRLLK 58
>gb|ESW29322.1| hypothetical protein PHAVU_002G060900g [Phaseolus vulgaris]
Length = 106
Score = 49.3 bits (116), Expect(2) = 3e-11
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 165 LWIPV*PSKIVEVTNS*KLKKIEDKEIVEV 254
+WIP+ PSKI+EVTNS KL +EDKEIVEV
Sbjct: 61 IWIPIEPSKIIEVTNSRKLSSVEDKEIVEV 90
Score = 44.3 bits (103), Expect(2) = 3e-11
Identities = 24/43 (55%), Positives = 27/43 (62%)
Frame = +2
Query: 32 RRHRGRSTTPRNQQHENFVRNYPFSLFGSGLRRMVGTTSIHLV 160
++H RSTT NQ HENFV Y L GL MVGT +IHLV
Sbjct: 17 KKHWERSTTLGNQGHENFVSIYIHGLSRLGLTGMVGTINIHLV 59
>gb|AFK44984.1| unknown [Medicago truncatula]
Length = 63
Score = 47.8 bits (112), Expect(2) = 2e-09
Identities = 20/28 (71%), Positives = 26/28 (92%)
Frame = -3
Query: 186 MVIRVSKVQTRWMLVVPTILLSPDPNKE 103
MVI VSK++TRWM +VPTIL+SPDP+K+
Sbjct: 1 MVIWVSKIRTRWMFIVPTILVSPDPHKK 28
Score = 40.0 bits (92), Expect(2) = 2e-09
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -2
Query: 76 VLLIPRRSASSSMSPIGTSRVGLT 5
VLLIP+RSASS M PIGTS VGLT
Sbjct: 40 VLLIPKRSASSPMPPIGTSGVGLT 63
>ref|XP_002886888.1| hypothetical protein ARALYDRAFT_475597 [Arabidopsis lyrata subsp.
lyrata] gi|297332729|gb|EFH63147.1| hypothetical protein
ARALYDRAFT_475597 [Arabidopsis lyrata subsp. lyrata]
Length = 60
Score = 50.8 bits (120), Expect(2) = 3e-09
Identities = 21/29 (72%), Positives = 28/29 (96%)
Frame = -3
Query: 186 MVIRVSKVQTRWMLVVPTILLSPDPNKEK 100
MVIRVSKV+TRWM +VPT+L+SP+PN+E+
Sbjct: 1 MVIRVSKVRTRWMFIVPTMLISPNPNEEE 29
Score = 36.2 bits (82), Expect(2) = 3e-09
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = -2
Query: 100 GIISNKVFVLLIPRRSASSSMSPI 29
GII KVFVLLI RRSASS M PI
Sbjct: 33 GIIFKKVFVLLISRRSASSPMPPI 56
>ref|XP_002535497.1| conserved hypothetical protein [Ricinus communis]
gi|223522895|gb|EEF26886.1| conserved hypothetical
protein [Ricinus communis]
Length = 110
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +3
Query: 3 QVNPTLLVPIGDIEEEALRLGINNTKTLLEIIPFLYLDRD 122
+VNPT LVPIG I+EEALRLGINNTK LLEI PF Y DRD
Sbjct: 71 KVNPTPLVPIGGIKEEALRLGINNTKPLLEIFPFPYWDRD 110
>ref|NP_042462.1| ORF54b [Pinus thunbergii] gi|1262702|dbj|BAA04417.1| ORF54b [Pinus
thunbergii] gi|145048796|gb|ABP35414.1| ORF54e [Pinus
koraiensis]
Length = 54
Score = 48.9 bits (115), Expect(2) = 5e-06
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 127 KNGWDNKHPSRLYFGYPYN 183
+NGWDNKHPSRLYFGYPYN
Sbjct: 30 ENGWDNKHPSRLYFGYPYN 48
Score = 26.9 bits (58), Expect(2) = 5e-06
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 3/24 (12%)
Frame = +2
Query: 41 RGRSTTPRNQQHENFV---RNYPF 103
RG STT N+QH++FV +YPF
Sbjct: 2 RGESTTYGNRQHKSFVIAHMHYPF 25
>ref|XP_003618685.1| Photosystem I assembly protein ycf3 [Medicago truncatula]
gi|358344504|ref|XP_003636329.1| Photosystem I assembly
protein ycf3 [Medicago truncatula]
gi|358349399|ref|XP_003638725.1| Photosystem I assembly
protein ycf3 [Medicago truncatula]
gi|355493700|gb|AES74903.1| Photosystem I assembly
protein ycf3 [Medicago truncatula]
gi|355502264|gb|AES83467.1| Photosystem I assembly
protein ycf3 [Medicago truncatula]
gi|355504660|gb|AES85863.1| Photosystem I assembly
protein ycf3 [Medicago truncatula]
Length = 66
Score = 55.8 bits (133), Expect = 6e-06
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +1
Query: 130 NGWDNKHPSRLYFGYPYNHRRSLK 201
NGWDNKHPSR YFGYPYNHRR LK
Sbjct: 43 NGWDNKHPSRSYFGYPYNHRRLLK 66