BLASTX nr result
ID: Jatropha_contig00001510
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00001510
(366 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308985.1| predicted protein [Populus trichocarpa] gi|2... 96 4e-18
ref|XP_002325223.1| predicted protein [Populus trichocarpa] gi|2... 96 5e-18
gb|ABK92543.1| unknown [Populus trichocarpa] 96 5e-18
ref|XP_002285234.1| PREDICTED: uncharacterized protein LOC100250... 91 1e-16
emb|CAN71764.1| hypothetical protein VITISV_039227 [Vitis vinifera] 91 1e-16
gb|EOY31081.1| Ribosomal protein L36, putative [Theobroma cacao] 87 3e-15
gb|ESR64164.1| hypothetical protein CICLE_v10010005mg [Citrus cl... 85 1e-14
gb|EMJ03916.1| hypothetical protein PRUPE_ppa012804mg [Prunus pe... 84 2e-14
gb|EMJ05950.1| hypothetical protein PRUPE_ppa013063mg [Prunus pe... 81 2e-13
ref|XP_006288954.1| hypothetical protein CARUB_v10002319mg [Caps... 73 4e-11
ref|XP_003609341.1| 50S ribosomal protein L36 [Medicago truncatu... 73 4e-11
ref|XP_003609340.1| 50S ribosomal protein L36 [Medicago truncatu... 73 4e-11
ref|NP_197518.1| ribosomal protein L36 [Arabidopsis thaliana] gi... 72 7e-11
ref|XP_002871926.1| ribosomal protein L36 family protein [Arabid... 71 1e-10
gb|ESQ42039.1| hypothetical protein EUTSA_v10015097mg [Eutrema s... 70 4e-10
ref|XP_004150587.1| PREDICTED: uncharacterized protein LOC101223... 69 5e-10
ref|XP_004150586.1| PREDICTED: uncharacterized protein LOC101223... 69 5e-10
ref|XP_004287309.1| PREDICTED: 50S ribosomal protein L36-like is... 69 6e-10
pdb|3BBO|6 Chain 6, Homology Model For The Spinach Chloroplast 5... 67 2e-09
ref|XP_004508491.1| PREDICTED: uncharacterized protein LOC101508... 67 2e-09
>ref|XP_002308985.1| predicted protein [Populus trichocarpa] gi|222854961|gb|EEE92508.1|
hypothetical protein POPTR_0006s06830g [Populus
trichocarpa]
Length = 97
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/78 (58%), Positives = 56/78 (71%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTTSTEISANQGITSNHDMGIGLASIIPKNIVPKKHEP 189
YV+C+SNPKHKQRQGF T AY G S E SA QGI + G+GLA++I PKKHEP
Sbjct: 24 YVICNSNPKHKQRQGFSTLAYGGLISAETSAPQGIIPSQSTGVGLATLI-----PKKHEP 78
Query: 190 SMIYGWSGNLASLLFKQG 243
S +YGW +L+S +FKQG
Sbjct: 79 SAMYGWRADLSSFVFKQG 96
>ref|XP_002325223.1| predicted protein [Populus trichocarpa] gi|222866657|gb|EEF03788.1|
hypothetical protein POPTR_0018s13090g [Populus
trichocarpa]
Length = 132
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/78 (60%), Positives = 55/78 (70%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTTSTEISANQGITSNHDMGIGLASIIPKNIVPKKHEP 189
YV+CSSNPKHKQRQGF TFAY G S E +A I + MGIGLAS++ PKK+EP
Sbjct: 59 YVICSSNPKHKQRQGFATFAYSGLISAETTAPPRIVPSQSMGIGLASLL-----PKKYEP 113
Query: 190 SMIYGWSGNLASLLFKQG 243
S +YGW L+S LFKQG
Sbjct: 114 STMYGWRAGLSSFLFKQG 131
>gb|ABK92543.1| unknown [Populus trichocarpa]
Length = 97
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/78 (60%), Positives = 55/78 (70%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTTSTEISANQGITSNHDMGIGLASIIPKNIVPKKHEP 189
YV+CSSNPKHKQRQGF TFAY G S E +A I + MGIGLAS++ PKK+EP
Sbjct: 24 YVICSSNPKHKQRQGFATFAYSGLISAETTAPPRIVPSQSMGIGLASLL-----PKKYEP 78
Query: 190 SMIYGWSGNLASLLFKQG 243
S +YGW L+S LFKQG
Sbjct: 79 STMYGWRAGLSSFLFKQG 96
>ref|XP_002285234.1| PREDICTED: uncharacterized protein LOC100250810 isoform 2 [Vitis
vinifera] gi|297738962|emb|CBI28207.3| unnamed protein
product [Vitis vinifera]
Length = 100
Score = 90.9 bits (224), Expect = 1e-16
Identities = 48/80 (60%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTT---STEISANQGITSNHDMGIGLASIIPKNIVPKK 180
YV+C++NPKHKQRQG TFA+EG S+E++A Q I+ NH + GLASIIPK K
Sbjct: 24 YVLCTANPKHKQRQGMSTFAHEGPLPPMSSEMNAKQEISRNHRLQGGLASIIPK-----K 78
Query: 181 HEPSMIYGWSGNLASLLFKQ 240
EPSM+YGW +LASLLFKQ
Sbjct: 79 PEPSMMYGWRASLASLLFKQ 98
>emb|CAN71764.1| hypothetical protein VITISV_039227 [Vitis vinifera]
Length = 100
Score = 90.9 bits (224), Expect = 1e-16
Identities = 48/80 (60%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTT---STEISANQGITSNHDMGIGLASIIPKNIVPKK 180
YV+C++NPKHKQRQG TFA+EG S+E++A Q I+ NH + GLASIIPK K
Sbjct: 24 YVLCTANPKHKQRQGMSTFAHEGPLPPMSSEMNAKQEISXNHRLQGGLASIIPK-----K 78
Query: 181 HEPSMIYGWSGNLASLLFKQ 240
EPSM+YGW +LASLLFKQ
Sbjct: 79 PEPSMMYGWRASLASLLFKQ 98
>gb|EOY31081.1| Ribosomal protein L36, putative [Theobroma cacao]
Length = 100
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGT---TSTEISANQGITSNHDMGIGLASIIPKNIVPKK 180
YV+C+SNPKHKQRQG TFA EG TSTE + I +H M GLAS++ PK+
Sbjct: 24 YVLCTSNPKHKQRQGISTFASEGALPPTSTETNVKHAIVPSHSMRPGLASLL-----PKR 78
Query: 181 HEPSMIYGWSGNLASLLFKQG 243
EPS++ GW NLASL+FK G
Sbjct: 79 QEPSLMLGWRANLASLIFKSG 99
>gb|ESR64164.1| hypothetical protein CICLE_v10010005mg [Citrus clementina]
gi|557554151|gb|ESR64165.1| hypothetical protein
CICLE_v10010005mg [Citrus clementina]
Length = 101
Score = 84.7 bits (208), Expect = 1e-14
Identities = 48/82 (58%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGT---TSTEISANQGITSNHDMGIGLASIIPKNIVPKK 180
YV+CS+N KHKQRQG TFA EG TS E + Q I NH++ GLAS+I PKK
Sbjct: 24 YVICSANLKHKQRQGMSTFANEGLIPFTSVETNVKQEIAPNHNIRAGLASLI-----PKK 78
Query: 181 HEP-SMIYGWSGNLASLLFKQG 243
HE S+IYGW +LASLLFKQG
Sbjct: 79 HESWSIIYGWRASLASLLFKQG 100
>gb|EMJ03916.1| hypothetical protein PRUPE_ppa012804mg [Prunus persica]
Length = 154
Score = 83.6 bits (205), Expect = 2e-14
Identities = 48/88 (54%), Positives = 56/88 (63%), Gaps = 9/88 (10%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTTST---EISANQGITSNHDMGIGLASIIPKNIVPKK 180
YV+C++NPKHKQRQG TFAYEGT S+ E SA +S H + GLAS+I PKK
Sbjct: 72 YVLCTANPKHKQRQGMSTFAYEGTVSSIYAETSAKLENSSGHSVQAGLASLI-----PKK 126
Query: 181 HEPSM------IYGWSGNLASLLFKQGK 246
HEPSM I GW LASLLF + K
Sbjct: 127 HEPSMPSIPSTILGWRVGLASLLFNEAK 154
>gb|EMJ05950.1| hypothetical protein PRUPE_ppa013063mg [Prunus persica]
Length = 142
Score = 80.9 bits (198), Expect = 2e-13
Identities = 47/88 (53%), Positives = 55/88 (62%), Gaps = 9/88 (10%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTTST---EISANQGITSNHDMGIGLASIIPKNIVPKK 180
YV+C++NPKHKQRQG TFAYEGT S+ E SA +S H + GLAS+I PKK
Sbjct: 60 YVLCTANPKHKQRQGMSTFAYEGTVSSMYAETSAKLENSSGHSVQAGLASLI-----PKK 114
Query: 181 HE------PSMIYGWSGNLASLLFKQGK 246
HE PS I GW LASLLF + K
Sbjct: 115 HEPLMPSIPSTILGWRVGLASLLFNKAK 142
>ref|XP_006288954.1| hypothetical protein CARUB_v10002319mg [Capsella rubella]
gi|482557660|gb|EOA21852.1| hypothetical protein
CARUB_v10002319mg [Capsella rubella]
Length = 103
Score = 72.8 bits (177), Expect = 4e-11
Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTTS----TEISANQGITSNHDMGI--GLASIIPKNIV 171
YV+CSSNPKHKQRQGF +FAYEG T +E NQ + G+ GLA+++
Sbjct: 24 YVICSSNPKHKQRQGFSSFAYEGITPSPLFSESMVNQEVVRLPSQGVSAGLAALL----- 78
Query: 172 PKKHEPSMIYGWSGNLASLLFKQG 243
K+ P+ ++GW L+S+LFKQG
Sbjct: 79 HKRPMPTAVFGWRAGLSSILFKQG 102
>ref|XP_003609341.1| 50S ribosomal protein L36 [Medicago truncatula]
gi|355510396|gb|AES91538.1| 50S ribosomal protein L36
[Medicago truncatula] gi|388510640|gb|AFK43386.1|
unknown [Medicago truncatula]
Length = 101
Score = 72.8 bits (177), Expect = 4e-11
Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTT---STEIS---ANQGITSNHDMGIGLASIIPKNIV 171
Y+MC++NPKHKQRQG TFAYE + S EIS A Q I H GLASII
Sbjct: 24 YIMCTANPKHKQRQGMSTFAYEAPSHQLSVEISSSCAAQEIKPLHTSRTGLASII----- 78
Query: 172 PKKHEPSMIYGWSGNLASLLFKQ 240
P++H SM+YGW LAS+L K+
Sbjct: 79 PQRHSLSMLYGWRVGLASILSKK 101
>ref|XP_003609340.1| 50S ribosomal protein L36 [Medicago truncatula]
gi|355510395|gb|AES91537.1| 50S ribosomal protein L36
[Medicago truncatula]
Length = 92
Score = 72.8 bits (177), Expect = 4e-11
Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTT---STEIS---ANQGITSNHDMGIGLASIIPKNIV 171
Y+MC++NPKHKQRQG TFAYE + S EIS A Q I H GLASII
Sbjct: 15 YIMCTANPKHKQRQGMSTFAYEAPSHQLSVEISSSCAAQEIKPLHTSRTGLASII----- 69
Query: 172 PKKHEPSMIYGWSGNLASLLFKQ 240
P++H SM+YGW LAS+L K+
Sbjct: 70 PQRHSLSMLYGWRVGLASILSKK 92
>ref|NP_197518.1| ribosomal protein L36 [Arabidopsis thaliana]
gi|30687686|ref|NP_850857.1| ribosomal protein L36
[Arabidopsis thaliana] gi|17065488|gb|AAL32898.1|
Unknown protein [Arabidopsis thaliana]
gi|20148663|gb|AAM10222.1| unknown protein [Arabidopsis
thaliana] gi|21555484|gb|AAM63869.1| ribosomal protein
L36-like [Arabidopsis thaliana]
gi|222424094|dbj|BAH20007.1| AT5G20180 [Arabidopsis
thaliana] gi|332005426|gb|AED92809.1| ribosomal protein
L36 [Arabidopsis thaliana] gi|332005427|gb|AED92810.1|
ribosomal protein L36 [Arabidopsis thaliana]
Length = 103
Score = 72.0 bits (175), Expect = 7e-11
Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTTST----EISANQGITSNHDMGI--GLASIIPKNIV 171
YV+CSSNPKHKQRQGF +FAYEG T + E A+Q + G+ GLAS++ K +
Sbjct: 24 YVICSSNPKHKQRQGFSSFAYEGITPSPLFAEPIASQELVRLPGQGVSAGLASLLHKRPM 83
Query: 172 PKKHEPSMIYGWSGNLASLLFKQG 243
P + +GW LAS+LFKQG
Sbjct: 84 PTAY-----FGWRSGLASILFKQG 102
>ref|XP_002871926.1| ribosomal protein L36 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297317763|gb|EFH48185.1| ribosomal protein
L36 family protein [Arabidopsis lyrata subsp. lyrata]
Length = 103
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTTS----TEISANQGITSNHDMGI--GLASIIPKNIV 171
Y++CSSNPKHKQRQGF +FAYEG +E A+Q +T G+ GLAS++
Sbjct: 24 YIICSSNPKHKQRQGFSSFAYEGIIPSPLLSESIASQEMTRLPGQGVSAGLASLL----- 78
Query: 172 PKKHEPSMIYGWSGNLASLLFKQG 243
K+ P+ +GW LAS+LFKQG
Sbjct: 79 HKRPMPTAFFGWRSGLASILFKQG 102
>gb|ESQ42039.1| hypothetical protein EUTSA_v10015097mg [Eutrema salsugineum]
Length = 103
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEG----TTSTEISANQGITSNHDMGI--GLASIIPKNIV 171
YV+CSSNPKHKQRQG+ + A++G +E ANQ + G+ GLAS++
Sbjct: 24 YVICSSNPKHKQRQGYCSIAHDGIIPPPLMSESIANQEVLKLPGQGVSAGLASLL----- 78
Query: 172 PKKHEPSMIYGWSGNLASLLFKQG 243
K+ EP+ ++GW LAS+LFKQG
Sbjct: 79 HKRTEPAAVFGWRAGLASILFKQG 102
>ref|XP_004150587.1| PREDICTED: uncharacterized protein LOC101223220 isoform 2 [Cucumis
sativus] gi|449465745|ref|XP_004150588.1| PREDICTED:
uncharacterized protein LOC101223220 isoform 3 [Cucumis
sativus] gi|449465747|ref|XP_004150589.1| PREDICTED:
uncharacterized protein LOC101223220 isoform 4 [Cucumis
sativus] gi|449523620|ref|XP_004168821.1| PREDICTED:
uncharacterized LOC101223220 isoform 2 [Cucumis sativus]
gi|449523622|ref|XP_004168822.1| PREDICTED:
uncharacterized LOC101223220 isoform 3 [Cucumis sativus]
gi|449523624|ref|XP_004168823.1| PREDICTED:
uncharacterized LOC101223220 isoform 4 [Cucumis sativus]
Length = 100
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTTSTEIS---ANQGITSNHDMGIGLASIIPKNIVPKK 180
Y+ CSSNPKHKQRQG TFA EG + + S Q I + + GLAS+I P+K
Sbjct: 24 YIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSQSLRTGLASLI-----PQK 78
Query: 181 HEPSMIYGWSGNLASLLFKQ 240
+EP+M GW LAS+L K+
Sbjct: 79 NEPTMFLGWRMGLASILLKK 98
>ref|XP_004150586.1| PREDICTED: uncharacterized protein LOC101223220 isoform 1 [Cucumis
sativus] gi|449523618|ref|XP_004168820.1| PREDICTED:
uncharacterized LOC101223220 isoform 1 [Cucumis sativus]
Length = 117
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTTSTEIS---ANQGITSNHDMGIGLASIIPKNIVPKK 180
Y+ CSSNPKHKQRQG TFA EG + + S Q I + + GLAS+I P+K
Sbjct: 41 YIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSQSLRTGLASLI-----PQK 95
Query: 181 HEPSMIYGWSGNLASLLFKQ 240
+EP+M GW LAS+L K+
Sbjct: 96 NEPTMFLGWRMGLASILLKK 115
>ref|XP_004287309.1| PREDICTED: 50S ribosomal protein L36-like isoform 1 [Fragaria vesca
subsp. vesca] gi|470101706|ref|XP_004287310.1|
PREDICTED: 50S ribosomal protein L36-like isoform 2
[Fragaria vesca subsp. vesca]
gi|470101708|ref|XP_004287311.1| PREDICTED: 50S
ribosomal protein L36-like isoform 3 [Fragaria vesca
subsp. vesca]
Length = 106
Score = 68.9 bits (167), Expect = 6e-10
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTTSTEISANQGITSNHDMGIGLASIIP-KNIVPKKHE 186
YV C++NPKHKQRQGF TFAY+G+ + + I + ++ G +S + +++P+K+E
Sbjct: 24 YVYCTANPKHKQRQGFSTFAYQGSDAPIFRSTPTIVTKQEINFGQSSHVGLASLIPRKNE 83
Query: 187 ---PSMIYGWSGNLASLLFKQ 240
PS GW LASLLFK+
Sbjct: 84 LSLPSPTLGWRVGLASLLFKK 104
>pdb|3BBO|6 Chain 6, Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 104
Score = 67.4 bits (163), Expect = 2e-09
Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQ-GFFTFAYEGTTST----EISANQGITSNHDMGI--GLASIIPKNI 168
YV+CSSNPKHKQRQ GF +FAYEG T + E A+Q + G+ GLAS++ K
Sbjct: 24 YVICSSNPKHKQRQGGFSSFAYEGITPSPLFAEPIASQELVRLPGQGVSAGLASLLHKRP 83
Query: 169 VPKKHEPSMIYGWSGNLASLLFKQG 243
+P + +GW LAS+LFKQG
Sbjct: 84 MPTAY-----FGWRSGLASILFKQG 103
>ref|XP_004508491.1| PREDICTED: uncharacterized protein LOC101508273 isoform X2 [Cicer
arietinum] gi|502151543|ref|XP_004508492.1| PREDICTED:
uncharacterized protein LOC101508273 isoform X3 [Cicer
arietinum]
Length = 101
Score = 67.0 bits (162), Expect = 2e-09
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Frame = +1
Query: 10 YVMCSSNPKHKQRQGFFTFAYEGTT---STEISAN---QGITSNHDMGIGLASIIPKNIV 171
YV+C+SNPKHKQRQG TFA E + S EIS + I H + GLASII
Sbjct: 24 YVLCTSNPKHKQRQGMSTFANEAPSHQPSLEISTSCTKHEIGPIHTLRTGLASII----- 78
Query: 172 PKKHEPSMIYGWSGNLASLLFKQ 240
P++H SM+YGW LAS++ K+
Sbjct: 79 PQRHSLSMLYGWRVGLASIMSKK 101