BLASTX nr result

ID: Jatropha_contig00001510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00001510
         (366 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308985.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002325223.1| predicted protein [Populus trichocarpa] gi|2...    96   5e-18
gb|ABK92543.1| unknown [Populus trichocarpa]                           96   5e-18
ref|XP_002285234.1| PREDICTED: uncharacterized protein LOC100250...    91   1e-16
emb|CAN71764.1| hypothetical protein VITISV_039227 [Vitis vinifera]    91   1e-16
gb|EOY31081.1| Ribosomal protein L36, putative [Theobroma cacao]       87   3e-15
gb|ESR64164.1| hypothetical protein CICLE_v10010005mg [Citrus cl...    85   1e-14
gb|EMJ03916.1| hypothetical protein PRUPE_ppa012804mg [Prunus pe...    84   2e-14
gb|EMJ05950.1| hypothetical protein PRUPE_ppa013063mg [Prunus pe...    81   2e-13
ref|XP_006288954.1| hypothetical protein CARUB_v10002319mg [Caps...    73   4e-11
ref|XP_003609341.1| 50S ribosomal protein L36 [Medicago truncatu...    73   4e-11
ref|XP_003609340.1| 50S ribosomal protein L36 [Medicago truncatu...    73   4e-11
ref|NP_197518.1| ribosomal protein L36 [Arabidopsis thaliana] gi...    72   7e-11
ref|XP_002871926.1| ribosomal protein L36 family protein [Arabid...    71   1e-10
gb|ESQ42039.1| hypothetical protein EUTSA_v10015097mg [Eutrema s...    70   4e-10
ref|XP_004150587.1| PREDICTED: uncharacterized protein LOC101223...    69   5e-10
ref|XP_004150586.1| PREDICTED: uncharacterized protein LOC101223...    69   5e-10
ref|XP_004287309.1| PREDICTED: 50S ribosomal protein L36-like is...    69   6e-10
pdb|3BBO|6 Chain 6, Homology Model For The Spinach Chloroplast 5...    67   2e-09
ref|XP_004508491.1| PREDICTED: uncharacterized protein LOC101508...    67   2e-09

>ref|XP_002308985.1| predicted protein [Populus trichocarpa] gi|222854961|gb|EEE92508.1|
           hypothetical protein POPTR_0006s06830g [Populus
           trichocarpa]
          Length = 97

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 46/78 (58%), Positives = 56/78 (71%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTTSTEISANQGITSNHDMGIGLASIIPKNIVPKKHEP 189
           YV+C+SNPKHKQRQGF T AY G  S E SA QGI  +   G+GLA++I     PKKHEP
Sbjct: 24  YVICNSNPKHKQRQGFSTLAYGGLISAETSAPQGIIPSQSTGVGLATLI-----PKKHEP 78

Query: 190 SMIYGWSGNLASLLFKQG 243
           S +YGW  +L+S +FKQG
Sbjct: 79  SAMYGWRADLSSFVFKQG 96


>ref|XP_002325223.1| predicted protein [Populus trichocarpa] gi|222866657|gb|EEF03788.1|
           hypothetical protein POPTR_0018s13090g [Populus
           trichocarpa]
          Length = 132

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/78 (60%), Positives = 55/78 (70%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTTSTEISANQGITSNHDMGIGLASIIPKNIVPKKHEP 189
           YV+CSSNPKHKQRQGF TFAY G  S E +A   I  +  MGIGLAS++     PKK+EP
Sbjct: 59  YVICSSNPKHKQRQGFATFAYSGLISAETTAPPRIVPSQSMGIGLASLL-----PKKYEP 113

Query: 190 SMIYGWSGNLASLLFKQG 243
           S +YGW   L+S LFKQG
Sbjct: 114 STMYGWRAGLSSFLFKQG 131


>gb|ABK92543.1| unknown [Populus trichocarpa]
          Length = 97

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/78 (60%), Positives = 55/78 (70%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTTSTEISANQGITSNHDMGIGLASIIPKNIVPKKHEP 189
           YV+CSSNPKHKQRQGF TFAY G  S E +A   I  +  MGIGLAS++     PKK+EP
Sbjct: 24  YVICSSNPKHKQRQGFATFAYSGLISAETTAPPRIVPSQSMGIGLASLL-----PKKYEP 78

Query: 190 SMIYGWSGNLASLLFKQG 243
           S +YGW   L+S LFKQG
Sbjct: 79  STMYGWRAGLSSFLFKQG 96


>ref|XP_002285234.1| PREDICTED: uncharacterized protein LOC100250810 isoform 2 [Vitis
           vinifera] gi|297738962|emb|CBI28207.3| unnamed protein
           product [Vitis vinifera]
          Length = 100

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/80 (60%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTT---STEISANQGITSNHDMGIGLASIIPKNIVPKK 180
           YV+C++NPKHKQRQG  TFA+EG     S+E++A Q I+ NH +  GLASIIPK     K
Sbjct: 24  YVLCTANPKHKQRQGMSTFAHEGPLPPMSSEMNAKQEISRNHRLQGGLASIIPK-----K 78

Query: 181 HEPSMIYGWSGNLASLLFKQ 240
            EPSM+YGW  +LASLLFKQ
Sbjct: 79  PEPSMMYGWRASLASLLFKQ 98


>emb|CAN71764.1| hypothetical protein VITISV_039227 [Vitis vinifera]
          Length = 100

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/80 (60%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTT---STEISANQGITSNHDMGIGLASIIPKNIVPKK 180
           YV+C++NPKHKQRQG  TFA+EG     S+E++A Q I+ NH +  GLASIIPK     K
Sbjct: 24  YVLCTANPKHKQRQGMSTFAHEGPLPPMSSEMNAKQEISXNHRLQGGLASIIPK-----K 78

Query: 181 HEPSMIYGWSGNLASLLFKQ 240
            EPSM+YGW  +LASLLFKQ
Sbjct: 79  PEPSMMYGWRASLASLLFKQ 98


>gb|EOY31081.1| Ribosomal protein L36, putative [Theobroma cacao]
          Length = 100

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGT---TSTEISANQGITSNHDMGIGLASIIPKNIVPKK 180
           YV+C+SNPKHKQRQG  TFA EG    TSTE +    I  +H M  GLAS++     PK+
Sbjct: 24  YVLCTSNPKHKQRQGISTFASEGALPPTSTETNVKHAIVPSHSMRPGLASLL-----PKR 78

Query: 181 HEPSMIYGWSGNLASLLFKQG 243
            EPS++ GW  NLASL+FK G
Sbjct: 79  QEPSLMLGWRANLASLIFKSG 99


>gb|ESR64164.1| hypothetical protein CICLE_v10010005mg [Citrus clementina]
           gi|557554151|gb|ESR64165.1| hypothetical protein
           CICLE_v10010005mg [Citrus clementina]
          Length = 101

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 48/82 (58%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGT---TSTEISANQGITSNHDMGIGLASIIPKNIVPKK 180
           YV+CS+N KHKQRQG  TFA EG    TS E +  Q I  NH++  GLAS+I     PKK
Sbjct: 24  YVICSANLKHKQRQGMSTFANEGLIPFTSVETNVKQEIAPNHNIRAGLASLI-----PKK 78

Query: 181 HEP-SMIYGWSGNLASLLFKQG 243
           HE  S+IYGW  +LASLLFKQG
Sbjct: 79  HESWSIIYGWRASLASLLFKQG 100


>gb|EMJ03916.1| hypothetical protein PRUPE_ppa012804mg [Prunus persica]
          Length = 154

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/88 (54%), Positives = 56/88 (63%), Gaps = 9/88 (10%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTTST---EISANQGITSNHDMGIGLASIIPKNIVPKK 180
           YV+C++NPKHKQRQG  TFAYEGT S+   E SA    +S H +  GLAS+I     PKK
Sbjct: 72  YVLCTANPKHKQRQGMSTFAYEGTVSSIYAETSAKLENSSGHSVQAGLASLI-----PKK 126

Query: 181 HEPSM------IYGWSGNLASLLFKQGK 246
           HEPSM      I GW   LASLLF + K
Sbjct: 127 HEPSMPSIPSTILGWRVGLASLLFNEAK 154


>gb|EMJ05950.1| hypothetical protein PRUPE_ppa013063mg [Prunus persica]
          Length = 142

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 47/88 (53%), Positives = 55/88 (62%), Gaps = 9/88 (10%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTTST---EISANQGITSNHDMGIGLASIIPKNIVPKK 180
           YV+C++NPKHKQRQG  TFAYEGT S+   E SA    +S H +  GLAS+I     PKK
Sbjct: 60  YVLCTANPKHKQRQGMSTFAYEGTVSSMYAETSAKLENSSGHSVQAGLASLI-----PKK 114

Query: 181 HE------PSMIYGWSGNLASLLFKQGK 246
           HE      PS I GW   LASLLF + K
Sbjct: 115 HEPLMPSIPSTILGWRVGLASLLFNKAK 142


>ref|XP_006288954.1| hypothetical protein CARUB_v10002319mg [Capsella rubella]
           gi|482557660|gb|EOA21852.1| hypothetical protein
           CARUB_v10002319mg [Capsella rubella]
          Length = 103

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTTS----TEISANQGITSNHDMGI--GLASIIPKNIV 171
           YV+CSSNPKHKQRQGF +FAYEG T     +E   NQ +      G+  GLA+++     
Sbjct: 24  YVICSSNPKHKQRQGFSSFAYEGITPSPLFSESMVNQEVVRLPSQGVSAGLAALL----- 78

Query: 172 PKKHEPSMIYGWSGNLASLLFKQG 243
            K+  P+ ++GW   L+S+LFKQG
Sbjct: 79  HKRPMPTAVFGWRAGLSSILFKQG 102


>ref|XP_003609341.1| 50S ribosomal protein L36 [Medicago truncatula]
           gi|355510396|gb|AES91538.1| 50S ribosomal protein L36
           [Medicago truncatula] gi|388510640|gb|AFK43386.1|
           unknown [Medicago truncatula]
          Length = 101

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTT---STEIS---ANQGITSNHDMGIGLASIIPKNIV 171
           Y+MC++NPKHKQRQG  TFAYE  +   S EIS   A Q I   H    GLASII     
Sbjct: 24  YIMCTANPKHKQRQGMSTFAYEAPSHQLSVEISSSCAAQEIKPLHTSRTGLASII----- 78

Query: 172 PKKHEPSMIYGWSGNLASLLFKQ 240
           P++H  SM+YGW   LAS+L K+
Sbjct: 79  PQRHSLSMLYGWRVGLASILSKK 101


>ref|XP_003609340.1| 50S ribosomal protein L36 [Medicago truncatula]
           gi|355510395|gb|AES91537.1| 50S ribosomal protein L36
           [Medicago truncatula]
          Length = 92

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTT---STEIS---ANQGITSNHDMGIGLASIIPKNIV 171
           Y+MC++NPKHKQRQG  TFAYE  +   S EIS   A Q I   H    GLASII     
Sbjct: 15  YIMCTANPKHKQRQGMSTFAYEAPSHQLSVEISSSCAAQEIKPLHTSRTGLASII----- 69

Query: 172 PKKHEPSMIYGWSGNLASLLFKQ 240
           P++H  SM+YGW   LAS+L K+
Sbjct: 70  PQRHSLSMLYGWRVGLASILSKK 92


>ref|NP_197518.1| ribosomal protein L36 [Arabidopsis thaliana]
           gi|30687686|ref|NP_850857.1| ribosomal protein L36
           [Arabidopsis thaliana] gi|17065488|gb|AAL32898.1|
           Unknown protein [Arabidopsis thaliana]
           gi|20148663|gb|AAM10222.1| unknown protein [Arabidopsis
           thaliana] gi|21555484|gb|AAM63869.1| ribosomal protein
           L36-like [Arabidopsis thaliana]
           gi|222424094|dbj|BAH20007.1| AT5G20180 [Arabidopsis
           thaliana] gi|332005426|gb|AED92809.1| ribosomal protein
           L36 [Arabidopsis thaliana] gi|332005427|gb|AED92810.1|
           ribosomal protein L36 [Arabidopsis thaliana]
          Length = 103

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTTST----EISANQGITSNHDMGI--GLASIIPKNIV 171
           YV+CSSNPKHKQRQGF +FAYEG T +    E  A+Q +      G+  GLAS++ K  +
Sbjct: 24  YVICSSNPKHKQRQGFSSFAYEGITPSPLFAEPIASQELVRLPGQGVSAGLASLLHKRPM 83

Query: 172 PKKHEPSMIYGWSGNLASLLFKQG 243
           P  +     +GW   LAS+LFKQG
Sbjct: 84  PTAY-----FGWRSGLASILFKQG 102


>ref|XP_002871926.1| ribosomal protein L36 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317763|gb|EFH48185.1| ribosomal protein
           L36 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 103

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTTS----TEISANQGITSNHDMGI--GLASIIPKNIV 171
           Y++CSSNPKHKQRQGF +FAYEG       +E  A+Q +T     G+  GLAS++     
Sbjct: 24  YIICSSNPKHKQRQGFSSFAYEGIIPSPLLSESIASQEMTRLPGQGVSAGLASLL----- 78

Query: 172 PKKHEPSMIYGWSGNLASLLFKQG 243
            K+  P+  +GW   LAS+LFKQG
Sbjct: 79  HKRPMPTAFFGWRSGLASILFKQG 102


>gb|ESQ42039.1| hypothetical protein EUTSA_v10015097mg [Eutrema salsugineum]
          Length = 103

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEG----TTSTEISANQGITSNHDMGI--GLASIIPKNIV 171
           YV+CSSNPKHKQRQG+ + A++G       +E  ANQ +      G+  GLAS++     
Sbjct: 24  YVICSSNPKHKQRQGYCSIAHDGIIPPPLMSESIANQEVLKLPGQGVSAGLASLL----- 78

Query: 172 PKKHEPSMIYGWSGNLASLLFKQG 243
            K+ EP+ ++GW   LAS+LFKQG
Sbjct: 79  HKRTEPAAVFGWRAGLASILFKQG 102


>ref|XP_004150587.1| PREDICTED: uncharacterized protein LOC101223220 isoform 2 [Cucumis
           sativus] gi|449465745|ref|XP_004150588.1| PREDICTED:
           uncharacterized protein LOC101223220 isoform 3 [Cucumis
           sativus] gi|449465747|ref|XP_004150589.1| PREDICTED:
           uncharacterized protein LOC101223220 isoform 4 [Cucumis
           sativus] gi|449523620|ref|XP_004168821.1| PREDICTED:
           uncharacterized LOC101223220 isoform 2 [Cucumis sativus]
           gi|449523622|ref|XP_004168822.1| PREDICTED:
           uncharacterized LOC101223220 isoform 3 [Cucumis sativus]
           gi|449523624|ref|XP_004168823.1| PREDICTED:
           uncharacterized LOC101223220 isoform 4 [Cucumis sativus]
          Length = 100

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTTSTEIS---ANQGITSNHDMGIGLASIIPKNIVPKK 180
           Y+ CSSNPKHKQRQG  TFA EG + +  S     Q I  +  +  GLAS+I     P+K
Sbjct: 24  YIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSQSLRTGLASLI-----PQK 78

Query: 181 HEPSMIYGWSGNLASLLFKQ 240
           +EP+M  GW   LAS+L K+
Sbjct: 79  NEPTMFLGWRMGLASILLKK 98


>ref|XP_004150586.1| PREDICTED: uncharacterized protein LOC101223220 isoform 1 [Cucumis
           sativus] gi|449523618|ref|XP_004168820.1| PREDICTED:
           uncharacterized LOC101223220 isoform 1 [Cucumis sativus]
          Length = 117

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTTSTEIS---ANQGITSNHDMGIGLASIIPKNIVPKK 180
           Y+ CSSNPKHKQRQG  TFA EG + +  S     Q I  +  +  GLAS+I     P+K
Sbjct: 41  YIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSQSLRTGLASLI-----PQK 95

Query: 181 HEPSMIYGWSGNLASLLFKQ 240
           +EP+M  GW   LAS+L K+
Sbjct: 96  NEPTMFLGWRMGLASILLKK 115


>ref|XP_004287309.1| PREDICTED: 50S ribosomal protein L36-like isoform 1 [Fragaria vesca
           subsp. vesca] gi|470101706|ref|XP_004287310.1|
           PREDICTED: 50S ribosomal protein L36-like isoform 2
           [Fragaria vesca subsp. vesca]
           gi|470101708|ref|XP_004287311.1| PREDICTED: 50S
           ribosomal protein L36-like isoform 3 [Fragaria vesca
           subsp. vesca]
          Length = 106

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTTSTEISANQGITSNHDMGIGLASIIP-KNIVPKKHE 186
           YV C++NPKHKQRQGF TFAY+G+ +    +   I +  ++  G +S +   +++P+K+E
Sbjct: 24  YVYCTANPKHKQRQGFSTFAYQGSDAPIFRSTPTIVTKQEINFGQSSHVGLASLIPRKNE 83

Query: 187 ---PSMIYGWSGNLASLLFKQ 240
              PS   GW   LASLLFK+
Sbjct: 84  LSLPSPTLGWRVGLASLLFKK 104


>pdb|3BBO|6 Chain 6, Homology Model For The Spinach Chloroplast 50s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
          Length = 104

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQ-GFFTFAYEGTTST----EISANQGITSNHDMGI--GLASIIPKNI 168
           YV+CSSNPKHKQRQ GF +FAYEG T +    E  A+Q +      G+  GLAS++ K  
Sbjct: 24  YVICSSNPKHKQRQGGFSSFAYEGITPSPLFAEPIASQELVRLPGQGVSAGLASLLHKRP 83

Query: 169 VPKKHEPSMIYGWSGNLASLLFKQG 243
           +P  +     +GW   LAS+LFKQG
Sbjct: 84  MPTAY-----FGWRSGLASILFKQG 103


>ref|XP_004508491.1| PREDICTED: uncharacterized protein LOC101508273 isoform X2 [Cicer
           arietinum] gi|502151543|ref|XP_004508492.1| PREDICTED:
           uncharacterized protein LOC101508273 isoform X3 [Cicer
           arietinum]
          Length = 101

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
 Frame = +1

Query: 10  YVMCSSNPKHKQRQGFFTFAYEGTT---STEISAN---QGITSNHDMGIGLASIIPKNIV 171
           YV+C+SNPKHKQRQG  TFA E  +   S EIS +     I   H +  GLASII     
Sbjct: 24  YVLCTSNPKHKQRQGMSTFANEAPSHQPSLEISTSCTKHEIGPIHTLRTGLASII----- 78

Query: 172 PKKHEPSMIYGWSGNLASLLFKQ 240
           P++H  SM+YGW   LAS++ K+
Sbjct: 79  PQRHSLSMLYGWRVGLASIMSKK 101


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