BLASTX nr result
ID: Jatropha_contig00001273
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00001273
(507 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320687.1| predicted protein [Populus trichocarpa] gi|1... 105 2e-21
gb|ABK58467.1| LIM domain protein WLIM1a [Populus tremula x Popu... 105 2e-21
ref|XP_002302405.1| predicted protein [Populus trichocarpa] gi|1... 105 2e-21
gb|ABK58468.1| LIM domain protein WLIM1b [Populus tremula x Popu... 105 2e-21
dbj|BAB84581.1| transcription factor LIM [Populus kitakamiensis] 105 6e-21
ref|XP_002510088.1| Pollen-specific protein SF3, putative [Ricin... 105 8e-21
ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Viti... 101 1e-20
gb|AFV60741.1| LIM domain protein LIM-2 [Gossypium hirsutum] 102 6e-20
gb|ESR46881.1| hypothetical protein CICLE_v10002540mg [Citrus cl... 101 8e-20
ref|XP_004501516.1| PREDICTED: pollen-specific protein SF3-like ... 100 2e-19
ref|NP_001238429.1| uncharacterized protein LOC100499947 [Glycin... 100 2e-19
ref|XP_006342667.1| PREDICTED: pollen-specific protein SF3-like ... 99 4e-19
ref|XP_004252738.1| PREDICTED: pollen-specific protein SF3-like ... 99 4e-19
gb|EOY15704.1| GATA type zinc finger transcription factor family... 99 5e-19
gb|AGE09584.1| LIM1-like protein [Eucalyptus cladocalyx] 99 5e-19
dbj|BAM05591.1| LIM transcription factor [Eucalyptus pyrocarpa] ... 99 5e-19
ref|NP_001237652.1| uncharacterized protein LOC100527547 [Glycin... 99 5e-19
ref|XP_004498991.1| PREDICTED: pollen-specific protein SF3-like ... 99 7e-19
gb|AFK47041.1| unknown [Lotus japonicus] 98 9e-19
gb|AFK42495.1| unknown [Lotus japonicus] 98 9e-19
>ref|XP_002320687.1| predicted protein [Populus trichocarpa] gi|18565116|dbj|BAB84582.1|
transcription factor LIM [Populus kitakamiensis]
gi|222861460|gb|EEE99002.1| transcription factor LIM
family protein [Populus trichocarpa]
gi|225626277|gb|ACN97188.1| LIM transcription factor
[Populus trichocarpa] gi|254047524|gb|ACT64134.1|
transcription factor Lim1 [Populus deltoides]
gi|254047526|gb|ACT64135.1| transcription factor Lim1
[Populus deltoides]
Length = 197
Score = 105 bits (261), Expect(2) = 2e-21
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKCIHGG ISPSNY+AHEGRLY KHHHNQLIKEKGNLSQLEGD EKDS
Sbjct: 131 HKSCFKCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGDIEKDS 183
Score = 23.1 bits (48), Expect(2) = 2e-21
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 348 LNEKANGREAAAE 310
+N K NGRE AAE
Sbjct: 184 MNNKTNGREVAAE 196
>gb|ABK58467.1| LIM domain protein WLIM1a [Populus tremula x Populus alba]
Length = 197
Score = 105 bits (261), Expect(2) = 2e-21
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKCIHGG ISPSNY+AHEGRLY KHHHNQLIKEKGNLSQLEGD EKDS
Sbjct: 131 HKSCFKCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGDIEKDS 183
Score = 23.1 bits (48), Expect(2) = 2e-21
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 348 LNEKANGREAAAE 310
+N K NGRE AAE
Sbjct: 184 MNNKTNGREVAAE 196
>ref|XP_002302405.1| predicted protein [Populus trichocarpa] gi|118483298|gb|ABK93551.1|
unknown [Populus trichocarpa]
gi|225626275|gb|ACN97187.1| LIM transcription factor
[Populus trichocarpa]
Length = 197
Score = 105 bits (261), Expect(2) = 2e-21
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKCIHGG ISPSNY+AHEGRLY KHHHNQLIKEKGNLSQLEGD EKDS
Sbjct: 131 HKSCFKCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGDVEKDS 183
Score = 22.7 bits (47), Expect(2) = 2e-21
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 348 LNEKANGREAAAE 310
+N+K NGRE +AE
Sbjct: 184 MNDKTNGREVSAE 196
>gb|ABK58468.1| LIM domain protein WLIM1b [Populus tremula x Populus alba]
gi|550344814|gb|EEE81678.2| hypothetical protein
POPTR_0002s11880g [Populus trichocarpa]
Length = 197
Score = 105 bits (261), Expect(2) = 2e-21
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKCIHGG ISPSNY+AHEGRLY KHHHNQLIKEKGNLSQLEGD EKDS
Sbjct: 131 HKSCFKCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGDVEKDS 183
Score = 22.7 bits (47), Expect(2) = 2e-21
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 348 LNEKANGREAAAE 310
+N+K NGRE +AE
Sbjct: 184 MNDKTNGREVSAE 196
>dbj|BAB84581.1| transcription factor LIM [Populus kitakamiensis]
Length = 197
Score = 105 bits (261), Expect(2) = 6e-21
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKCIHGG ISPSNY+AHEGRLY KHHHNQLIKEKGNLSQLEGD EKDS
Sbjct: 131 HKSCFKCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGDIEKDS 183
Score = 21.2 bits (43), Expect(2) = 6e-21
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 348 LNEKANGREAAAE 310
++ K NGRE AAE
Sbjct: 184 MSNKTNGREVAAE 196
>ref|XP_002510088.1| Pollen-specific protein SF3, putative [Ricinus communis]
gi|223550789|gb|EEF52275.1| Pollen-specific protein SF3,
putative [Ricinus communis]
Length = 197
Score = 105 bits (261), Expect = 8e-21
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKCIHGG VISPSNY+AHEGRLY KHHHNQLIKEKGNLSQLEGD EK+S
Sbjct: 131 HKSCFKCIHGGCVISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGDVEKES 183
>ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
gi|147785329|emb|CAN72849.1| hypothetical protein
VITISV_013939 [Vitis vinifera]
gi|302142193|emb|CBI19396.3| unnamed protein product
[Vitis vinifera]
Length = 197
Score = 101 bits (251), Expect(2) = 1e-20
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKC HGG ISPSNY+AHEGRLY KHHH QLIKEKGNLSQLEGD+EKD+
Sbjct: 131 HKSCFKCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGDHEKDT 183
Score = 24.3 bits (51), Expect(2) = 1e-20
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1
Query: 345 NEKANGREAAAE 310
NEK NGRE AAE
Sbjct: 185 NEKVNGREVAAE 196
>gb|AFV60741.1| LIM domain protein LIM-2 [Gossypium hirsutum]
Length = 190
Score = 102 bits (253), Expect = 6e-20
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKD 351
H+SCFKC HGG VISPSNY+AHEGRLY KHHH QLIKEKGNLSQLEGD EKD
Sbjct: 131 HKSCFKCTHGGCVISPSNYIAHEGRLYCKHHHGQLIKEKGNLSQLEGDREKD 182
>gb|ESR46881.1| hypothetical protein CICLE_v10002540mg [Citrus clementina]
Length = 199
Score = 101 bits (252), Expect = 8e-20
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKC HGG VISPSNY+AHEGRLY KHHHNQLIKEKGNLSQLEG++EK S
Sbjct: 133 HKSCFKCSHGGCVISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGEHEKTS 185
>ref|XP_004501516.1| PREDICTED: pollen-specific protein SF3-like [Cicer arietinum]
Length = 191
Score = 100 bits (249), Expect = 2e-19
Identities = 44/53 (83%), Positives = 50/53 (94%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKCIHGG VISPSNY+AHEG+LY KHHH QLIKEKGNLSQLEGD+EK++
Sbjct: 131 HKSCFKCIHGGCVISPSNYIAHEGKLYCKHHHVQLIKEKGNLSQLEGDHEKNA 183
>ref|NP_001238429.1| uncharacterized protein LOC100499947 [Glycine max]
gi|255627907|gb|ACU14298.1| unknown [Glycine max]
Length = 196
Score = 100 bits (248), Expect = 2e-19
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKC HGG VISPSNY+AHEG+LY KHHH QLIKEKGNLSQLEGDNEK +
Sbjct: 130 HKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHVQLIKEKGNLSQLEGDNEKSA 182
>ref|XP_006342667.1| PREDICTED: pollen-specific protein SF3-like [Solanum tuberosum]
Length = 187
Score = 99.4 bits (246), Expect = 4e-19
Identities = 44/53 (83%), Positives = 49/53 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKC HGG VISPSNY+AHEGRLY KHHH QLIKEKGNLSQLEGD++K+S
Sbjct: 128 HKSCFKCSHGGCVISPSNYIAHEGRLYCKHHHVQLIKEKGNLSQLEGDHDKNS 180
>ref|XP_004252738.1| PREDICTED: pollen-specific protein SF3-like [Solanum lycopersicum]
Length = 187
Score = 99.4 bits (246), Expect = 4e-19
Identities = 44/53 (83%), Positives = 49/53 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKC HGG VISPSNY+AHEGRLY KHHH QLIKEKGNLSQLEGD++K+S
Sbjct: 128 HKSCFKCSHGGCVISPSNYIAHEGRLYCKHHHVQLIKEKGNLSQLEGDHDKNS 180
>gb|EOY15704.1| GATA type zinc finger transcription factor family protein
[Theobroma cacao]
Length = 193
Score = 99.0 bits (245), Expect = 5e-19
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKD 351
H+SCFKC HGG VISPSNY+AHEGRLY KHHH QLIKEKGNLSQLEG+ EK+
Sbjct: 131 HKSCFKCTHGGCVISPSNYVAHEGRLYCKHHHGQLIKEKGNLSQLEGEREKE 182
>gb|AGE09584.1| LIM1-like protein [Eucalyptus cladocalyx]
Length = 188
Score = 99.0 bits (245), Expect = 5e-19
Identities = 42/53 (79%), Positives = 49/53 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKC HGG VISPSNY+AHEG+LY +HHH QLIKEKGNLSQLEGD+EK++
Sbjct: 131 HKSCFKCTHGGCVISPSNYIAHEGKLYCRHHHTQLIKEKGNLSQLEGDHEKET 183
>dbj|BAM05591.1| LIM transcription factor [Eucalyptus pyrocarpa]
gi|383081879|dbj|BAM05592.1| LIM transcription factor
[Eucalyptus globulus subsp. globulus]
Length = 188
Score = 99.0 bits (245), Expect = 5e-19
Identities = 42/53 (79%), Positives = 49/53 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKC HGG VISPSNY+AHEG+LY +HHH QLIKEKGNLSQLEGD+EK++
Sbjct: 131 HKSCFKCTHGGCVISPSNYVAHEGKLYCRHHHTQLIKEKGNLSQLEGDHEKET 183
>ref|NP_001237652.1| uncharacterized protein LOC100527547 [Glycine max]
gi|255632586|gb|ACU16643.1| unknown [Glycine max]
Length = 196
Score = 99.0 bits (245), Expect = 5e-19
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKC HGG VISPSNY+AHEG+LY KHHH QLIKEKGNL+QLEGDNEK +
Sbjct: 130 HKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHVQLIKEKGNLTQLEGDNEKSA 182
>ref|XP_004498991.1| PREDICTED: pollen-specific protein SF3-like [Cicer arietinum]
Length = 195
Score = 98.6 bits (244), Expect = 7e-19
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKDS 348
H+SCFKC HGG VISPSNY+AHEG+LY KHHH QLIKEKGNLSQLEGD+EK++
Sbjct: 131 HKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGDHEKNA 183
>gb|AFK47041.1| unknown [Lotus japonicus]
Length = 195
Score = 98.2 bits (243), Expect = 9e-19
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKD 351
H+SCFKC HGG VISPSNY+AHEG+LY KHHH QLIKEKGNLSQLEGD+EK+
Sbjct: 131 HKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGDHEKN 182
>gb|AFK42495.1| unknown [Lotus japonicus]
Length = 195
Score = 98.2 bits (243), Expect = 9e-19
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = -2
Query: 506 HRSCFKCIHGGGVISPSNYMAHEGRLYXKHHHNQLIKEKGNLSQLEGDNEKD 351
H+SCFKC HGG VISPSNY+AHEG+LY KHHH QLIKEKGNLSQLEGD+EK+
Sbjct: 131 HKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGDHEKN 182