BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00001140
         (605 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005088849.1| Ycf2 (chloroplast) [Millettia pinnata] gi|37...    57   4e-06
gb|AEK71557.1| hypothetical chloroplast RF2 [Quillaja saponaria]       56   6e-06

>ref|YP_005088849.1| Ycf2 (chloroplast) [Millettia pinnata]
            gi|374249596|ref|YP_005088866.1| Ycf2 (chloroplast)
            [Millettia pinnata] gi|356474868|gb|AET11386.1| Ycf2
            (chloroplast) [Millettia pinnata]
            gi|356474885|gb|AET11402.1| Ycf2 (chloroplast) [Millettia
            pinnata]
          Length = 2285

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 33/71 (46%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
 Frame = -2

Query: 277  SFHTGKNCRKSFGNTSSYFSMISDDQENSRETLS-FHRSEFL----------FLQSK*HF 131
            SFHT KNCRKSF NT SYFSMIS DQ N    +  FHRS  +           L ++ HF
Sbjct: 966  SFHTRKNCRKSFDNTDSYFSMISHDQNNWLNPVKPFHRSSLISSFYKANRLRLLNNRYHF 1025

Query: 130  LLICPWTGPIY 98
               C    P Y
Sbjct: 1026 SFYCNKRFPFY 1036


>gb|AEK71557.1| hypothetical chloroplast RF2 [Quillaja saponaria]
          Length = 2258

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 33/71 (46%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
 Frame = -2

Query: 277  SFHTGKNCRKSFGNTSSYFSMISDDQEN-SRETLSFHRSEFL----------FLQSK*HF 131
            SFHT KN RKSF NT SYFSMIS DQ+N      +FHRS  +          FL ++ HF
Sbjct: 965  SFHTRKNRRKSFDNTDSYFSMISHDQDNWLNPVKAFHRSSLISSFYKANRLRFLNNRHHF 1024

Query: 130  LLICPWTGPIY 98
               C    P Y
Sbjct: 1025 CFYCNKRFPFY 1035