BLASTX nr result
ID: Jatropha_contig00001067
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00001067
(546 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002720170.1| ycf1 [Jatropha curcas] gi|224979621|gb|ACN72... 229 8e-62
ref|YP_004327719.1| hypothetical chloroplast RF1 [Hevea brasilie... 226 1e-60
ref|YP_001718494.1| hypothetical chloroplast RF1 [Manihot escule... 223 7e-60
ref|YP_005090236.1| ycf1 gene product (chloroplast) [Ricinus com... 222 1e-59
ref|YP_005090224.1| ycf1 gene product (chloroplast) [Ricinus com... 222 1e-59
ref|YP_007025526.1| hypothetical chloroplast RF1 (chloroplast) [... 222 2e-59
ref|YP_007025441.1| hypothetical chloroplast RF1 (chloroplast) [... 222 2e-59
ref|YP_004286160.1| hypothetical chloroplast RF1 [Fragaria vesca... 222 2e-59
ref|YP_006883382.1| hypothetical chloroplast RF1 [Fragaria mands... 222 2e-59
ref|YP_004286148.1| hypothetical chloroplast RF1 [Fragaria vesca... 222 2e-59
gb|AFS89536.1| putative RF1 protein, partial (chloroplast) [Frag... 222 2e-59
ref|YP_007025429.1| hypothetical chloroplast RF1 (chloroplast) [... 222 2e-59
gb|AFQ39574.1| putative chloroplast protein RF1, partial [Potent... 222 2e-59
gb|AFQ39573.1| putative chloroplast protein RF1, partial [Fragar... 222 2e-59
gb|AFQ39565.1| putative chloroplast protein RF1, partial [Fragar... 222 2e-59
gb|AFQ39555.1| putative chloroplast protein RF1, partial [Fragar... 222 2e-59
gb|ABG76917.1| putative RF1 [Fragaria x ananassa] 222 2e-59
ref|YP_004842295.1| hypothetical chloroplast RF1 [Pyrus pyrifoli... 221 3e-59
gb|AFU96757.1| Ycf1, partial (chloroplast) [Euphorbia maculata] 221 3e-59
gb|ACY07934.1| Ycf1 [Cynomorium songaricum] 221 3e-59
>ref|YP_002720170.1| ycf1 [Jatropha curcas] gi|224979621|gb|ACN72748.1| ycf1 [Jatropha
curcas]
Length = 1907
Score = 229 bits (585), Expect(2) = 8e-62
Identities = 120/133 (90%), Positives = 121/133 (90%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQFVF
Sbjct: 121 RNSMRNLSIQFVF 133
Score = 33.5 bits (75), Expect(2) = 8e-62
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQFVFLNNLIFQLFNHFIL 147
>ref|YP_004327719.1| hypothetical chloroplast RF1 [Hevea brasiliensis]
gi|308523562|gb|ADO33612.1| hypothetical chloroplast RF1
[Hevea brasiliensis]
Length = 1899
Score = 226 bits (575), Expect(2) = 1e-60
Identities = 118/133 (88%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MI SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MIFQSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQFVF
Sbjct: 121 RNSMRNLSIQFVF 133
Score = 33.5 bits (75), Expect(2) = 1e-60
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQFVFLNNLIFQLFNHFIL 147
>ref|YP_001718494.1| hypothetical chloroplast RF1 [Manihot esculenta]
gi|157695942|gb|ABV66211.1| hypothetical chloroplast RF1
[Manihot esculenta]
Length = 1856
Score = 223 bits (568), Expect(2) = 7e-60
Identities = 117/133 (87%), Positives = 118/133 (88%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MI SFI GNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MIFQSFIPGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQFVF
Sbjct: 121 RNSMRNLSIQFVF 133
Score = 33.5 bits (75), Expect(2) = 7e-60
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQFVFLNNLIFQLFNHFIL 147
>ref|YP_005090236.1| ycf1 gene product (chloroplast) [Ricinus communis]
gi|339516224|gb|AEJ82614.1| hypothetical chloroplast RF1
[Ricinus communis]
Length = 1805
Score = 222 bits (566), Expect(2) = 1e-59
Identities = 116/133 (87%), Positives = 118/133 (88%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MI SFILGNLVSLCMKIIN VV+VGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MIFKSFILGNLVSLCMKIINLVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYG+TT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGATT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQFVF
Sbjct: 121 RNSMRNLSIQFVF 133
Score = 33.5 bits (75), Expect(2) = 1e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQFVFLNNLIFQLFNHFIL 147
>ref|YP_005090224.1| ycf1 gene product (chloroplast) [Ricinus communis]
gi|339516212|gb|AEJ82602.1| hypothetical chloroplast RF1
[Ricinus communis]
Length = 398
Score = 222 bits (566), Expect(2) = 1e-59
Identities = 116/133 (87%), Positives = 118/133 (88%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MI SFILGNLVSLCMKIIN VV+VGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKK
Sbjct: 1 MIFKSFILGNLVSLCMKIINLVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYG+TT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGATT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQFVF
Sbjct: 121 RNSMRNLSIQFVF 133
Score = 33.5 bits (75), Expect(2) = 1e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQFVFLNNLIFQLFNHFIL 147
>ref|YP_007025526.1| hypothetical chloroplast RF1 (chloroplast) [Fragaria virginiana]
gi|357198883|gb|AET62798.1| hypothetical chloroplast RF1
(chloroplast) [Fragaria virginiana]
Length = 1916
Score = 222 bits (565), Expect(2) = 2e-59
Identities = 116/133 (87%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ +F
Sbjct: 121 RNSMRNLSIQCLF 133
Score = 33.1 bits (74), Expect(2) = 2e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQCLFLNNLIFQLFNHFIL 147
>ref|YP_007025441.1| hypothetical chloroplast RF1 (chloroplast) [Fragaria chiloensis]
gi|357198797|gb|AET62713.1| hypothetical chloroplast RF1
(chloroplast) [Fragaria chiloensis]
Length = 1916
Score = 222 bits (565), Expect(2) = 2e-59
Identities = 116/133 (87%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ +F
Sbjct: 121 RNSMRNLSIQCLF 133
Score = 33.1 bits (74), Expect(2) = 2e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQCLFLNNLIFQLFNHFIL 147
>ref|YP_004286160.1| hypothetical chloroplast RF1 [Fragaria vesca subsp. vesca]
gi|324022835|gb|ADY15409.1| hypothetical chloroplast RF1
[Fragaria vesca subsp. vesca]
Length = 1916
Score = 222 bits (565), Expect(2) = 2e-59
Identities = 116/133 (87%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ +F
Sbjct: 121 RNSMRNLSIQCLF 133
Score = 33.1 bits (74), Expect(2) = 2e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQCLFLNNLIFQLFNHFIL 147
>ref|YP_006883382.1| hypothetical chloroplast RF1 [Fragaria mandshurica]
gi|378554827|gb|AFC17761.1| hypothetical chloroplast RF1
[Fragaria mandshurica]
Length = 373
Score = 222 bits (565), Expect(2) = 2e-59
Identities = 116/133 (87%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ +F
Sbjct: 121 RNSMRNLSIQCLF 133
Score = 33.1 bits (74), Expect(2) = 2e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQCLFLNNLIFQLFNHFIL 147
>ref|YP_004286148.1| hypothetical chloroplast RF1 [Fragaria vesca subsp. vesca]
gi|324022823|gb|ADY15397.1| hypothetical chloroplast RF1
[Fragaria vesca subsp. vesca]
Length = 373
Score = 222 bits (565), Expect(2) = 2e-59
Identities = 116/133 (87%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ +F
Sbjct: 121 RNSMRNLSIQCLF 133
Score = 33.1 bits (74), Expect(2) = 2e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQCLFLNNLIFQLFNHFIL 147
>gb|AFS89536.1| putative RF1 protein, partial (chloroplast) [Fragaria chiloensis]
Length = 370
Score = 222 bits (565), Expect(2) = 2e-59
Identities = 116/133 (87%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ +F
Sbjct: 121 RNSMRNLSIQCLF 133
Score = 33.1 bits (74), Expect(2) = 2e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQCLFLNNLIFQLFNHFIL 147
>ref|YP_007025429.1| hypothetical chloroplast RF1 (chloroplast) [Fragaria chiloensis]
gi|428697332|ref|YP_007025514.1| hypothetical
chloroplast RF1 (chloroplast) [Fragaria virginiana]
gi|357198785|gb|AET62701.1| hypothetical chloroplast RF1
(chloroplast) [Fragaria chiloensis]
gi|357198871|gb|AET62786.1| hypothetical chloroplast RF1
(chloroplast) [Fragaria virginiana]
Length = 367
Score = 222 bits (565), Expect(2) = 2e-59
Identities = 116/133 (87%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ +F
Sbjct: 121 RNSMRNLSIQCLF 133
Score = 33.1 bits (74), Expect(2) = 2e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQCLFLNNLIFQLFNHFIL 147
>gb|AFQ39574.1| putative chloroplast protein RF1, partial [Potentilla villosa]
Length = 353
Score = 222 bits (565), Expect(2) = 2e-59
Identities = 116/133 (87%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ +F
Sbjct: 121 RNSMRNLSIQCLF 133
Score = 33.1 bits (74), Expect(2) = 2e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQCLFLNNLIFQLFNHFIL 147
>gb|AFQ39573.1| putative chloroplast protein RF1, partial [Fragaria iinumae]
Length = 352
Score = 222 bits (565), Expect(2) = 2e-59
Identities = 116/133 (87%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKNFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ +F
Sbjct: 121 RNSMRNLSIQCLF 133
Score = 33.1 bits (74), Expect(2) = 2e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQCLFLNNLIFQLFNHFIL 147
>gb|AFQ39565.1| putative chloroplast protein RF1, partial [Fragaria nipponica]
gi|402239332|gb|AFQ39566.1| putative chloroplast protein
RF1, partial [Fragaria chinensis]
gi|402239334|gb|AFQ39567.1| putative chloroplast protein
RF1, partial [Fragaria moupinensis]
gi|402239336|gb|AFQ39568.1| putative chloroplast protein
RF1, partial [Fragaria tibetica]
gi|402239338|gb|AFQ39569.1| putative chloroplast protein
RF1, partial [Fragaria daltoniana]
gi|402239340|gb|AFQ39570.1| putative chloroplast protein
RF1, partial [Fragaria corymbosa]
gi|402239342|gb|AFQ39571.1| putative chloroplast protein
RF1, partial [Fragaria gracilis]
Length = 352
Score = 222 bits (565), Expect(2) = 2e-59
Identities = 116/133 (87%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ +F
Sbjct: 121 RNSMRNLSIQCLF 133
Score = 33.1 bits (74), Expect(2) = 2e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQCLFLNNLIFQLFNHFIL 147
>gb|AFQ39555.1| putative chloroplast protein RF1, partial [Fragaria vesca subsp.
americana] gi|402239316|gb|AFQ39558.1| putative
chloroplast protein RF1, partial [Fragaria iturupensis]
gi|402239318|gb|AFQ39559.1| putative chloroplast protein
RF1, partial [Fragaria x ananassa subsp. cuneifolia]
gi|402239320|gb|AFQ39560.1| putative chloroplast protein
RF1, partial [Fragaria virginiana]
gi|402239322|gb|AFQ39561.1| putative chloroplast protein
RF1, partial [Fragaria bucharica]
gi|402239324|gb|AFQ39562.1| putative chloroplast protein
RF1, partial [Fragaria orientalis]
gi|402239326|gb|AFQ39563.1| putative chloroplast protein
RF1, partial [Fragaria viridis]
Length = 352
Score = 222 bits (565), Expect(2) = 2e-59
Identities = 116/133 (87%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ +F
Sbjct: 121 RNSMRNLSIQCLF 133
Score = 33.1 bits (74), Expect(2) = 2e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQCLFLNNLIFQLFNHFIL 147
>gb|ABG76917.1| putative RF1 [Fragaria x ananassa]
Length = 268
Score = 222 bits (565), Expect(2) = 2e-59
Identities = 116/133 (87%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ +F
Sbjct: 121 RNSMRNLSIQCLF 133
Score = 33.1 bits (74), Expect(2) = 2e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 127 LSIQCLFLNNLIFQLFNHFIL 147
>ref|YP_004842295.1| hypothetical chloroplast RF1 [Pyrus pyrifolia]
gi|345433618|dbj|BAK69440.1| hypothetical chloroplast
RF1 [Pyrus pyrifolia]
Length = 1879
Score = 221 bits (564), Expect(2) = 3e-59
Identities = 115/133 (86%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYY PLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYVPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ++F
Sbjct: 121 RNSMRNLSIQWLF 133
Score = 32.7 bits (73), Expect(2) = 3e-59
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -3
Query: 43 LNNLIFQLFNHFIL 2
LNNLIFQLFNHFIL
Sbjct: 134 LNNLIFQLFNHFIL 147
>gb|AFU96757.1| Ycf1, partial (chloroplast) [Euphorbia maculata]
Length = 977
Score = 221 bits (562), Expect(2) = 3e-59
Identities = 114/129 (88%), Positives = 116/129 (89%)
Frame = -2
Query: 431 SFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKKVSAT 252
SFILGNLVSLCMKI+NSVV+VGLYYGFLTTFS GPSYLFLLRARVIEEGEEGTEKKVSAT
Sbjct: 4 SFILGNLVSLCMKILNSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKKVSAT 63
Query: 251 TGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTTRNSM 72
TGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLL FDYGST RNSM
Sbjct: 64 TGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTNRNSM 123
Query: 71 RNLSIQFVF 45
RNLSIQFVF
Sbjct: 124 RNLSIQFVF 132
Score = 33.5 bits (75), Expect(2) = 3e-59
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 LAFNLYSLNNLIFQLFNHFIL 2
L+ LNNLIFQLFNHFIL
Sbjct: 126 LSIQFVFLNNLIFQLFNHFIL 146
>gb|ACY07934.1| Ycf1 [Cynomorium songaricum]
Length = 286
Score = 221 bits (564), Expect(2) = 3e-59
Identities = 115/133 (86%), Positives = 119/133 (89%)
Frame = -2
Query: 443 MILISFILGNLVSLCMKIINSVVLVGLYYGFLTTFSTGPSYLFLLRARVIEEGEEGTEKK 264
MIL SFILGNLVSLCMKIINSVV+VGLYYGFLTTFS GPSYLFLLRARV+EEGEEGTEKK
Sbjct: 1 MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGEEGTEKK 60
Query: 263 VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLXXXXXXXXXXXFDYGSTT 84
VSATTGFITGQLMMFISIYY PLHLALGRPHTITVLALPYLL FDYGSTT
Sbjct: 61 VSATTGFITGQLMMFISIYYVPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT 120
Query: 83 RNSMRNLSIQFVF 45
RNSMRNLSIQ++F
Sbjct: 121 RNSMRNLSIQWLF 133
Score = 32.7 bits (73), Expect(2) = 3e-59
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -3
Query: 43 LNNLIFQLFNHFIL 2
LNNLIFQLFNHFIL
Sbjct: 134 LNNLIFQLFNHFIL 147