BLASTX nr result

ID: Jatropha_contig00000888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00000888
         (441 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX94904.1| Gamma histone variant H2AX [Theobroma cacao]           129   5e-28
ref|XP_004290709.1| PREDICTED: probable histone H2AXa-like [Frag...   128   8e-28
gb|EEE94961.2| hypothetical protein POPTR_0013s02990g [Populus t...   126   2e-27
gb|EOY11258.1| Histone superfamily protein [Theobroma cacao]          126   2e-27
ref|XP_002319038.1| histone 2 [Populus trichocarpa]                   126   2e-27
gb|EMJ02539.1| hypothetical protein PRUPE_ppa013134mg [Prunus pe...   125   5e-27
gb|ESR57430.1| hypothetical protein CICLE_v10022778mg [Citrus cl...   125   7e-27
gb|ESR46476.1| hypothetical protein CICLE_v10002804mg [Citrus cl...   125   7e-27
ref|XP_004302471.1| PREDICTED: probable histone H2AXa-like [Frag...   125   7e-27
gb|EMJ07316.1| hypothetical protein PRUPE_ppa013072mg [Prunus pe...   125   7e-27
ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|550309370...   125   7e-27
ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|3575121...   125   7e-27
ref|XP_004247603.1| PREDICTED: probable histone H2AXb-like [Sola...   124   2e-26
ref|XP_006363468.1| PREDICTED: probable histone H2AXb-like [Sola...   123   2e-26
ref|XP_004494649.1| PREDICTED: histone H2AX-like [Cicer arietinum]    123   2e-26
gb|AEQ33640.1| histone H2A [Lycium barbarum]                          123   2e-26
ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycin...   123   2e-26
ref|XP_003625881.1| Histone H2A [Medicago truncatula] gi|3555008...   123   3e-26
ref|XP_006356040.1| PREDICTED: probable histone H2AXb-like [Sola...   122   4e-26
ref|XP_004234016.1| PREDICTED: probable histone H2AXa-like [Sola...   122   4e-26

>gb|EOX94904.1| Gamma histone variant H2AX [Theobroma cacao]
          Length = 139

 Score =  129 bits (323), Expect = 5e-28
 Identities = 63/64 (98%), Positives = 64/64 (100%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKK+GKGKGDIGSA
Sbjct: 76  RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKIGKGKGDIGSA 135

Query: 259 SQEF 248
           SQEF
Sbjct: 136 SQEF 139


>ref|XP_004290709.1| PREDICTED: probable histone H2AXa-like [Fragaria vesca subsp.
           vesca]
          Length = 138

 Score =  128 bits (321), Expect = 8e-28
 Identities = 63/64 (98%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKK GKGKGDIGSA
Sbjct: 75  RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKTGKGKGDIGSA 134

Query: 259 SQEF 248
           SQEF
Sbjct: 135 SQEF 138


>gb|EEE94961.2| hypothetical protein POPTR_0013s02990g [Populus trichocarpa]
          Length = 185

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/64 (96%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLPKKMGKGKGDIGSA
Sbjct: 122 RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSA 181

Query: 259 SQEF 248
           SQEF
Sbjct: 182 SQEF 185


>gb|EOY11258.1| Histone superfamily protein [Theobroma cacao]
          Length = 140

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/64 (96%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLPKKMGKGKGDIGSA
Sbjct: 77  RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSA 136

Query: 259 SQEF 248
           SQEF
Sbjct: 137 SQEF 140


>ref|XP_002319038.1| histone 2 [Populus trichocarpa]
          Length = 142

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/64 (96%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLPKKMGKGKGDIGSA
Sbjct: 79  RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSA 138

Query: 259 SQEF 248
           SQEF
Sbjct: 139 SQEF 142


>gb|EMJ02539.1| hypothetical protein PRUPE_ppa013134mg [Prunus persica]
          Length = 138

 Score =  125 bits (314), Expect = 5e-27
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQ LLPKK+G+GKGDIGSA
Sbjct: 75  RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKIGRGKGDIGSA 134

Query: 259 SQEF 248
           SQEF
Sbjct: 135 SQEF 138


>gb|ESR57430.1| hypothetical protein CICLE_v10022778mg [Citrus clementina]
          Length = 139

 Score =  125 bits (313), Expect = 7e-27
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLP+KMGKG+ DIGSA
Sbjct: 76  RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGREDIGSA 135

Query: 259 SQEF 248
           SQEF
Sbjct: 136 SQEF 139


>gb|ESR46476.1| hypothetical protein CICLE_v10002804mg [Citrus clementina]
          Length = 140

 Score =  125 bits (313), Expect = 7e-27
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLPKK+GKGKGDIGSA
Sbjct: 77  RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSA 136

Query: 259 SQEF 248
           SQEF
Sbjct: 137 SQEF 140


>ref|XP_004302471.1| PREDICTED: probable histone H2AXa-like [Fragaria vesca subsp.
           vesca]
          Length = 141

 Score =  125 bits (313), Expect = 7e-27
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLPKK+GKGKGDIGSA
Sbjct: 78  RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSA 137

Query: 259 SQEF 248
           SQEF
Sbjct: 138 SQEF 141


>gb|EMJ07316.1| hypothetical protein PRUPE_ppa013072mg [Prunus persica]
          Length = 141

 Score =  125 bits (313), Expect = 7e-27
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLPKK+GKGKGDIGSA
Sbjct: 78  RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSA 137

Query: 259 SQEF 248
           SQEF
Sbjct: 138 SQEF 141


>ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|550309370|gb|ERP46977.1|
           hypothetical protein POPTR_0369s00210g [Populus
           trichocarpa] gi|550338028|gb|ERP60460.1| histone H2A
           family protein [Populus trichocarpa]
          Length = 142

 Score =  125 bits (313), Expect = 7e-27
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLPKK+GKGKGDIGSA
Sbjct: 79  RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSA 138

Query: 259 SQEF 248
           SQEF
Sbjct: 139 SQEF 142


>ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|357512107|ref|XP_003626342.1|
           Histone H2A [Medicago truncatula]
           gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold
           [Medicago truncatula] gi|124360160|gb|ABN08176.1|
           Histone H2A; Histone-fold [Medicago truncatula]
           gi|355501355|gb|AES82558.1| Histone H2A [Medicago
           truncatula] gi|355501357|gb|AES82560.1| Histone H2A
           [Medicago truncatula] gi|388498640|gb|AFK37386.1|
           unknown [Medicago truncatula]
          Length = 139

 Score =  125 bits (313), Expect = 7e-27
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQ LLPKK+GKGKG+IGSA
Sbjct: 76  RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKVGKGKGEIGSA 135

Query: 259 SQEF 248
           SQEF
Sbjct: 136 SQEF 139


>ref|XP_004247603.1| PREDICTED: probable histone H2AXb-like [Solanum lycopersicum]
          Length = 142

 Score =  124 bits (310), Expect = 2e-26
 Identities = 61/64 (95%), Positives = 61/64 (95%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLPKK G GKGDIGSA
Sbjct: 79  RDNKKNRIVPRHIQLAVRNDEELSKLLGQVTIANGGVLPNIHQNLLPKKAGSGKGDIGSA 138

Query: 259 SQEF 248
           SQEF
Sbjct: 139 SQEF 142


>ref|XP_006363468.1| PREDICTED: probable histone H2AXb-like [Solanum tuberosum]
          Length = 142

 Score =  123 bits (309), Expect = 2e-26
 Identities = 61/64 (95%), Positives = 61/64 (95%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLPKK G GKGDIGSA
Sbjct: 79  RDNKKNRIVPRHIQLAVRNDEELSKLLGHVTIANGGVLPNIHQNLLPKKAGSGKGDIGSA 138

Query: 259 SQEF 248
           SQEF
Sbjct: 139 SQEF 142


>ref|XP_004494649.1| PREDICTED: histone H2AX-like [Cicer arietinum]
          Length = 139

 Score =  123 bits (309), Expect = 2e-26
 Identities = 60/64 (93%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLPKK+GKGKG+IGSA
Sbjct: 76  RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGEIGSA 135

Query: 259 SQEF 248
           SQEF
Sbjct: 136 SQEF 139


>gb|AEQ33640.1| histone H2A [Lycium barbarum]
          Length = 142

 Score =  123 bits (309), Expect = 2e-26
 Identities = 61/64 (95%), Positives = 61/64 (95%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLPKK G GKGDIGSA
Sbjct: 79  RDNKKNRIVPRHIQLAVRNDEELSKLLGHVTIANGGVLPNIHQNLLPKKAGSGKGDIGSA 138

Query: 259 SQEF 248
           SQEF
Sbjct: 139 SQEF 142


>ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycine max]
           gi|255625587|gb|ACU13138.1| unknown [Glycine max]
           gi|561020316|gb|ESW19087.1| hypothetical protein
           PHAVU_006G095800g [Phaseolus vulgaris]
          Length = 140

 Score =  123 bits (309), Expect = 2e-26
 Identities = 60/64 (93%), Positives = 63/64 (98%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLPKK+GKGKG+IGSA
Sbjct: 77  RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGEIGSA 136

Query: 259 SQEF 248
           SQEF
Sbjct: 137 SQEF 140


>ref|XP_003625881.1| Histone H2A [Medicago truncatula] gi|355500896|gb|AES82099.1|
           Histone H2A [Medicago truncatula]
           gi|388495504|gb|AFK35818.1| unknown [Medicago
           truncatula]
          Length = 142

 Score =  123 bits (308), Expect = 3e-26
 Identities = 60/64 (93%), Positives = 62/64 (96%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LLPKK+GKGKG+IGSA
Sbjct: 79  RDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQTLLPKKVGKGKGEIGSA 138

Query: 259 SQEF 248
           SQEF
Sbjct: 139 SQEF 142


>ref|XP_006356040.1| PREDICTED: probable histone H2AXb-like [Solanum tuberosum]
          Length = 142

 Score =  122 bits (307), Expect = 4e-26
 Identities = 60/64 (93%), Positives = 61/64 (95%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLP+K G GKGDIGSA
Sbjct: 79  RDNKKNRIVPRHIQLAVRNDEELSKLLGQVTIANGGVLPNIHQNLLPRKAGSGKGDIGSA 138

Query: 259 SQEF 248
           SQEF
Sbjct: 139 SQEF 142


>ref|XP_004234016.1| PREDICTED: probable histone H2AXa-like [Solanum lycopersicum]
          Length = 142

 Score =  122 bits (307), Expect = 4e-26
 Identities = 60/64 (93%), Positives = 61/64 (95%)
 Frame = -3

Query: 439 RDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGDIGSA 260
           RDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLP+K G GKGDIGSA
Sbjct: 79  RDNKKNRIVPRHIQLAVRNDEELSKLLGQVTIANGGVLPNIHQNLLPRKAGSGKGDIGSA 138

Query: 259 SQEF 248
           SQEF
Sbjct: 139 SQEF 142


Top