BLASTX nr result

ID: Jatropha_contig00000820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00000820
         (539 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321880.1| predicted protein [Populus trichocarpa]            75   9e-12
gb|EEF06007.2| hydroxyproline-rich glycoprotein [Populus trichoc...    75   1e-11
ref|XP_002523666.1| conserved hypothetical protein [Ricinus comm...    61   1e-07
ref|XP_002274822.2| PREDICTED: uncharacterized protein LOC100253...    58   2e-06

>ref|XP_002321880.1| predicted protein [Populus trichocarpa]
          Length = 466

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 56/153 (36%), Positives = 70/153 (45%), Gaps = 35/153 (22%)
 Frame = +2

Query: 107 APSKPDTNDSKTESSDRPQQPAGIGHGRGRP----PILPAFXXXXXXXXXXXXATGRGRG 274
           AP KPD ++SKTESS+   QP+G+GHGRG+P    PILPAF              GRGRG
Sbjct: 61  APGKPDLDESKTESSE--SQPSGLGHGRGKPVGTGPILPAFSTFISSVKNSQPGAGRGRG 118

Query: 275 ------------------------NLPSAVESGVGRGKLDKPV--AAPTNQEDEENRHIR 376
                                   NLP ++ SG+G     KPV    P     EENRH+R
Sbjct: 119 TTEPGPSRSTESRPESEPPKKAEANLPPSILSGLGGAGRGKPVKQEVPIEPAKEENRHLR 178

Query: 377 FR--PTVEPGVGRGKP---DKPVAASTNQEDEE 460
            R  P  +P   + K    D  V A+T    +E
Sbjct: 179 ARSQPRSQPRTRQQKTPDGDDAVPATTKMGTQE 211


>gb|EEF06007.2| hydroxyproline-rich glycoprotein [Populus trichocarpa]
          Length = 466

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 56/153 (36%), Positives = 70/153 (45%), Gaps = 35/153 (22%)
 Frame = +2

Query: 107 APSKPDTNDSKTESSDRPQQPAGIGHGRGRP----PILPAFXXXXXXXXXXXXATGRGRG 274
           AP KPD ++SKTESS+   QP+G+GHGRG+P    PILPAF              GRGRG
Sbjct: 61  APGKPDLDESKTESSE--SQPSGLGHGRGKPVGTGPILPAFSTFISSVKNSQPGAGRGRG 118

Query: 275 ------------------------NLPSAVESGVGRGKLDKPV--AAPTNQEDEENRHIR 376
                                   NLP ++ SG+G     KPV    P     EENRH+R
Sbjct: 119 TTEPGPSRSTESRPESEPPKKAEANLPPSILSGLGGAGRGKPVKQEVPIEPAKEENRHLR 178

Query: 377 FR--PTVEPGVGRGKP---DKPVAASTNQEDEE 460
            R  P  +P   + K    D  V A+T    +E
Sbjct: 179 ARSQPRSQPRTRQQKTPDGDDAVPATTKMGRQE 211


>ref|XP_002523666.1| conserved hypothetical protein [Ricinus communis]
           gi|223537066|gb|EEF38701.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 436

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 57/167 (34%), Positives = 70/167 (41%), Gaps = 27/167 (16%)
 Frame = +2

Query: 95  FDFT--APSKPDTNDSKTESSDRPQQPA-----GIGHGRGRP-PILPAFXXXXXXXXXXX 250
           FDFT  AP+KP+++D        P  P      G+GHG G   PILPAF           
Sbjct: 52  FDFTGKAPAKPESSDVAKPHYPPPPPPPPPPRNGVGHGHGGGNPILPAFSSFVSSIGRGR 111

Query: 251 XATGRGRGN------------LPSAVES---GVGRGKLDKPVAAPTNQEDEENRHIRFR- 382
             T    G             LPS + S   G GRG+ DKPV  PT Q  EENRHIR R 
Sbjct: 112 AITDPEPGPSRQPTESQSDSVLPSTIHSSLSGFGRGEPDKPVV-PTPQVKEENRHIRDRS 170

Query: 383 ---PTVEPGVGRGKPDKPVAASTNQEDEENRXIRFRPTVEPGVGRGK 514
              P  E    R KP        ++E+   R +      + G G G+
Sbjct: 171 RAKPKTEEAEVRAKP------KISREEAVKRAVSILSQGDTGEGMGR 211


>ref|XP_002274822.2| PREDICTED: uncharacterized protein LOC100253300 [Vitis vinifera]
          Length = 482

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 51/163 (31%), Positives = 68/163 (41%), Gaps = 26/163 (15%)
 Frame = +2

Query: 95  FDFT--APSKPD-TNDSKTESSDRPQQPAGIGHGRGRPPILPAFXXXXXXXXXXXXATGR 265
           FDF   AP K + T D  +ESS+ P  P G+GHGRG+PP  P+               GR
Sbjct: 45  FDFASGAPEKTEPTADPNSESSESPF-PLGLGHGRGKPPSQPSAPTLPSFSSFASTGIGR 103

Query: 266 GRGNLPSAVESGVGRGKLD----KPV---------AAP-------TNQEDEENRHIRFRP 385
           GRG L +     V +   D    KP+         +AP       T   +E N  +    
Sbjct: 104 GRGRLTAHPTDSVPQQSPDFAPKKPIFFSKEDAADSAPKPQSQLGTTPPEENNLPVSILS 163

Query: 386 TVEPGVGRGKPDKPVAASTNQEDEENRXIR---FRPTVEPGVG 505
            +  G GRG+P K   A   +E+   R  R   FR   +P  G
Sbjct: 164 ALSGGAGRGQPLKQTPAPPKEENRHLRQPRQPVFRSPQQPVAG 206


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