BLASTX nr result

ID: Jatropha_contig00000819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00000819
         (436 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005090401.1| sdh3 gene product (mitochondrion) [Boea hygr...    77   2e-12
ref|XP_003588305.1| hypothetical protein MTR_1g005670 [Medicago ...    59   8e-07

>ref|YP_005090401.1| sdh3 gene product (mitochondrion) [Boea hygrometrica]
           gi|340549504|gb|AEK53325.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Boea hygrometrica]
          Length = 150

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/50 (76%), Positives = 40/50 (80%)
 Frame = -3

Query: 434 SRRSKKATSGSNRCFGHSLTEPCCQSVLACCHAGKSRGFGRFYLLLDLNQ 285
           SR+SKKATSGSNRCF H    P    V ACCHAGKSRGFG+FYLLLDLNQ
Sbjct: 105 SRQSKKATSGSNRCFDHDSLLP----VRACCHAGKSRGFGKFYLLLDLNQ 150


>ref|XP_003588305.1| hypothetical protein MTR_1g005670 [Medicago truncatula]
           gi|355477353|gb|AES58556.1| hypothetical protein
           MTR_1g005670 [Medicago truncatula]
          Length = 250

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 32/43 (74%), Positives = 32/43 (74%)
 Frame = -3

Query: 434 SRRSKKATSGSNRCFGHSLTEPCCQSVLACCHAGKSRGFGRFY 306
           SRRSKKATSGSNR FGHS T P    V ACCHAGKSR FG  Y
Sbjct: 210 SRRSKKATSGSNRSFGHS-TPP----VRACCHAGKSRAFGLTY 247


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