BLASTX nr result

ID: Jatropha_contig00000705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00000705
         (510 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37971.1| unknown [Lotus japonicus]                               59   5e-07
ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus ...    58   1e-06

>gb|AFK37971.1| unknown [Lotus japonicus]
          Length = 27

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = -3

Query: 106 IHLYRYHHLHPESRMLWKKLVQFGKRF 26
           +HLYRYHHLHPESRMLWKKLVQFG+ F
Sbjct: 1   MHLYRYHHLHPESRMLWKKLVQFGRGF 27


>ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus communis]
          gi|223546055|gb|EEF47558.1| 50S ribosomal protein L2,
          putative [Ricinus communis]
          Length = 111

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -2

Query: 80 TPRKPYALEEACTVWEEVLIDQKEES 3
          TPRKPYALEEACTVWEE+LIDQKEES
Sbjct: 9  TPRKPYALEEACTVWEEILIDQKEES 34


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