BLASTX nr result

ID: Jatropha_contig00000564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00000564
         (277 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517473.1| structure-specific recognition protein, puta...    58   1e-06
ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, ...    57   2e-06
ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [...    57   2e-06
sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1...    57   3e-06
gb|ESW23191.1| hypothetical protein PHAVU_004G026200g [Phaseolus...    56   4e-06
ref|XP_004490989.1| PREDICTED: FACT complex subunit SSRP1-like i...    56   4e-06
ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [...    56   4e-06
ref|XP_004499164.1| PREDICTED: FACT complex subunit SSRP1-like [...    55   7e-06
ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [...    55   9e-06

>ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
           gi|223543484|gb|EEF45015.1| structure-specific
           recognition protein, putative [Ricinus communis]
          Length = 640

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/29 (82%), Positives = 29/29 (100%)
 Frame = -3

Query: 275 DKKRYEEEVSGYKNPQPVNVDSGNESDTE 189
           DKKRY+EEVSGYKNPQP+++DSGNESD+E
Sbjct: 612 DKKRYKEEVSGYKNPQPMDIDSGNESDSE 640


>ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
           sativus]
          Length = 303

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/28 (82%), Positives = 28/28 (100%)
 Frame = -3

Query: 275 DKKRYEEEVSGYKNPQPVNVDSGNESDT 192
           DKKRY+EE+SGYKNPQP+N+DSGNESD+
Sbjct: 275 DKKRYKEEISGYKNPQPMNIDSGNESDS 302


>ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [Cucumis sativus]
          Length = 642

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/28 (82%), Positives = 28/28 (100%)
 Frame = -3

Query: 275 DKKRYEEEVSGYKNPQPVNVDSGNESDT 192
           DKKRY+EE+SGYKNPQP+N+DSGNESD+
Sbjct: 614 DKKRYKEEISGYKNPQPMNIDSGNESDS 641


>sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
           chromatin transcription complex subunit SSRP1; AltName:
           Full=Recombination signal sequence recognition protein 1
           gi|2104679|emb|CAA66480.1| transcription factor [Vicia
           faba var. minor]
          Length = 642

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/28 (82%), Positives = 28/28 (100%)
 Frame = -3

Query: 275 DKKRYEEEVSGYKNPQPVNVDSGNESDT 192
           DKKRY++E+SGYKNPQP+NVDSGNESD+
Sbjct: 614 DKKRYKDEISGYKNPQPMNVDSGNESDS 641


>gb|ESW23191.1| hypothetical protein PHAVU_004G026200g [Phaseolus vulgaris]
          Length = 640

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 22/28 (78%), Positives = 28/28 (100%)
 Frame = -3

Query: 275 DKKRYEEEVSGYKNPQPVNVDSGNESDT 192
           DKKRY++E+SGYKNPQP+N+DSGNESD+
Sbjct: 612 DKKRYKDEISGYKNPQPMNIDSGNESDS 639


>ref|XP_004490989.1| PREDICTED: FACT complex subunit SSRP1-like isoform X1 [Cicer
           arietinum]
          Length = 643

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 22/28 (78%), Positives = 28/28 (100%)
 Frame = -3

Query: 275 DKKRYEEEVSGYKNPQPVNVDSGNESDT 192
           DKKRY++E+SGYKNPQP+N+DSGNESD+
Sbjct: 615 DKKRYKDEISGYKNPQPMNIDSGNESDS 642


>ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 640

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 22/28 (78%), Positives = 28/28 (100%)
 Frame = -3

Query: 275 DKKRYEEEVSGYKNPQPVNVDSGNESDT 192
           DKKRY++E+SGYKNPQP+N+DSGNESD+
Sbjct: 612 DKKRYKDEISGYKNPQPMNIDSGNESDS 639


>ref|XP_004499164.1| PREDICTED: FACT complex subunit SSRP1-like [Cicer arietinum]
          Length = 641

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 22/28 (78%), Positives = 28/28 (100%)
 Frame = -3

Query: 275 DKKRYEEEVSGYKNPQPVNVDSGNESDT 192
           DKKRY++E+SGYKNPQP+N+DSGNESD+
Sbjct: 613 DKKRYKDELSGYKNPQPMNIDSGNESDS 640


>ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 614

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 22/28 (78%), Positives = 27/28 (96%)
 Frame = -3

Query: 275 DKKRYEEEVSGYKNPQPVNVDSGNESDT 192
           DKKRY +E+SGYKNPQP+N+DSGNESD+
Sbjct: 586 DKKRYMDEISGYKNPQPMNIDSGNESDS 613


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