BLASTX nr result

ID: Jatropha_contig00000503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00000503
         (600 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173386.1| hypothetical protein NitaMp040 [Nicotiana tabac...   108   1e-21
ref|XP_006301510.1| hypothetical protein CARUB_v10021936mg, part...    66   6e-09

>ref|YP_173386.1| hypothetical protein NitaMp040 [Nicotiana tabacum]
           gi|56806549|dbj|BAD83450.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score =  108 bits (269), Expect = 1e-21
 Identities = 55/65 (84%), Positives = 56/65 (86%)
 Frame = +1

Query: 406 LGEEGISIAKDSDSIQPQVPLRLHCYDFTPVEDPTVVCANKTTKSLCSTSGTQKSWVIVG 585
           LGEE ISIAKDS  IQPQVPLRL CYDFTPVEDPTVVCANKTTK LC TS  QKSWVI+G
Sbjct: 40  LGEECISIAKDS--IQPQVPLRLPCYDFTPVEDPTVVCANKTTKGLCGTSVPQKSWVIIG 97

Query: 586 PMLWA 600
           PML A
Sbjct: 98  PMLRA 102


>ref|XP_006301510.1| hypothetical protein CARUB_v10021936mg, partial [Capsella rubella]
           gi|482570220|gb|EOA34408.1| hypothetical protein
           CARUB_v10021936mg, partial [Capsella rubella]
          Length = 72

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = +1

Query: 442 DSIQPQVPLRLHCYDFTPVEDPTVVCANKTTKSLCSTS 555
           DSIQPQVPL L CY+FT VEDP VVCANKT KSLC TS
Sbjct: 35  DSIQPQVPLWLPCYEFTRVEDPIVVCANKTIKSLCGTS 72


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