BLASTX nr result

ID: Jatropha_contig00000432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00000432
         (464 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531778.1| Plasminogen activator inhibitor 1 RNA-bindin...    56   5e-06

>ref|XP_002531778.1| Plasminogen activator inhibitor 1 RNA-binding protein, putative
           [Ricinus communis] gi|223528571|gb|EEF30592.1|
           Plasminogen activator inhibitor 1 RNA-binding protein,
           putative [Ricinus communis]
          Length = 364

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 41/126 (32%), Positives = 48/126 (38%)
 Frame = +3

Query: 87  MATMNPFDLLGDDDNEDPSLLIAAAQLNVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 266
           MATMNPFDLLGDDD EDP+ LIAAA L V                               
Sbjct: 1   MATMNPFDLLGDDDYEDPTQLIAAAHLKV-VEKPKKPSAPAQAQAQPVKPAKLPTKPPPP 59

Query: 267 XQAVREAKTDXXXXXXXXXXXXXXXXXXXXXXFNRDSXXXXXXXXXXXXXXXXXRPSEEG 446
            QAVRE K++                      F+R+                  +PSEEG
Sbjct: 60  AQAVREGKSEGGRGGGRGGGRGTGRGRGGGRGFDRELNNNETTFGGNNGFSGGHKPSEEG 119

Query: 447 DAGKPS 464
           + GKPS
Sbjct: 120 EGGKPS 125


Top