BLASTX nr result
ID: Jatropha_contig00000290
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00000290
(280 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEO51756.1| chloroplast chlorophyll A/B binding protein [Dimo... 60 1e-09
ref|XP_002528105.1| chlorophyll A/B binding protein, putative [R... 59 3e-09
gb|ACO51068.1| chloroplast chlorophyll A-B binding protein [Goss... 60 4e-09
ref|XP_002309134.1| light-harvesting complex II protein Lhcb4 [P... 57 4e-09
gb|EOY07231.1| Light-harvesting complex II protein Lhcb4 [Theobr... 59 9e-09
ref|XP_002323575.1| predicted protein [Populus trichocarpa] gi|2... 59 9e-09
gb|ABK96503.1| unknown [Populus trichocarpa x Populus deltoides] 59 9e-09
gb|ABK95186.1| unknown [Populus trichocarpa] 59 9e-09
ref|XP_004147887.1| PREDICTED: chlorophyll a-b binding protein C... 57 1e-08
gb|EMT21651.1| Chlorophyll a-b binding protein CP29.2, chloropla... 60 2e-08
gb|EMS60898.1| Chlorophyll a-b binding protein CP29.2, chloropla... 60 2e-08
ref|XP_003604653.1| Chlorophyll a-b binding protein [Medicago tr... 59 2e-08
ref|XP_002873005.1| chlorophyll a/b-binding protein CP29 [Arabid... 59 2e-08
gb|ACU19827.1| unknown [Glycine max] 59 2e-08
gb|ACJ84724.1| unknown [Medicago truncatula] gi|388501002|gb|AFK... 59 2e-08
gb|ESR42597.1| hypothetical protein CICLE_v10012370mg [Citrus cl... 60 3e-08
gb|ESR42596.1| hypothetical protein CICLE_v10012370mg [Citrus cl... 60 3e-08
ref|XP_002279834.1| PREDICTED: chlorophyll a-b binding protein C... 57 3e-08
ref|XP_006289419.1| hypothetical protein CARUB_v10002918mg [Caps... 59 3e-08
ref|XP_004506774.1| PREDICTED: LOW QUALITY PROTEIN: chlorophyll ... 58 4e-08
>gb|AEO51756.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 286
Score = 59.7 bits (143), Expect(2) = 1e-09
Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEK+ T ARL +V FLGFAVQAAVTGKGPLNN
Sbjct: 222 PLGLAADPEKKATLQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNN 267
Score = 28.1 bits (61), Expect(2) = 1e-09
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IID LTS
Sbjct: 273 SDPLHTTIIDTLTS 286
>ref|XP_002528105.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223532494|gb|EEF34284.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 285
Score = 59.3 bits (142), Expect(2) = 3e-09
Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLA DPEK+ T ARL +VAFLGFAVQAAVTGKGPLNN
Sbjct: 221 PLGLAEDPEKKATLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNN 266
Score = 27.3 bits (59), Expect(2) = 3e-09
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IIDN +S
Sbjct: 272 SDPLHTTIIDNFSS 285
>gb|ACO51068.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
Length = 285
Score = 59.7 bits (143), Expect(2) = 4e-09
Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEK+ T ARL +VAFLGFAVQAA TGKGPLNN
Sbjct: 221 PLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNN 266
Score = 26.6 bits (57), Expect(2) = 4e-09
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IID TS
Sbjct: 272 SDPLHTTIIDTFTS 285
>ref|XP_002309134.1| light-harvesting complex II protein Lhcb4 [Populus trichocarpa]
gi|118489077|gb|ABK96345.1| unknown [Populus trichocarpa
x Populus deltoides] gi|222855110|gb|EEE92657.1|
chlorophyll a/b binding protein CP29 [Populus
trichocarpa]
Length = 285
Score = 57.4 bits (137), Expect(2) = 4e-09
Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLA+DPEK+ T ARL +VAFLGFAVQA VTGKGPLNN
Sbjct: 221 PLGLASDPEKKATLQLAEIKHARLAMVAFLGFAVQAWVTGKGPLNN 266
Score = 28.9 bits (63), Expect(2) = 4e-09
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IIDNL+S
Sbjct: 272 SDPLHTTIIDNLSS 285
>gb|EOY07231.1| Light-harvesting complex II protein Lhcb4 [Theobroma cacao]
Length = 284
Score = 58.5 bits (140), Expect(2) = 9e-09
Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLA+DPEK+ T ARL +VAFLGFAVQAA TGKGPLNN
Sbjct: 220 PLGLASDPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNN 265
Score = 26.6 bits (57), Expect(2) = 9e-09
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IID TS
Sbjct: 271 SDPLHTTIIDTFTS 284
>ref|XP_002323575.1| predicted protein [Populus trichocarpa] gi|222868205|gb|EEF05336.1|
chlorophyll a/b binding protein CP29 [Populus
trichocarpa]
Length = 283
Score = 58.5 bits (140), Expect(2) = 9e-09
Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEK+ T ARL +VAFLGFAVQA VTGKGPLNN
Sbjct: 219 PLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAWVTGKGPLNN 264
Score = 26.6 bits (57), Expect(2) = 9e-09
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IID L+S
Sbjct: 270 SDPLHTTIIDTLSS 283
>gb|ABK96503.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 283
Score = 58.5 bits (140), Expect(2) = 9e-09
Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEK+ T ARL +VAFLGFAVQA VTGKGPLNN
Sbjct: 219 PLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAWVTGKGPLNN 264
Score = 26.6 bits (57), Expect(2) = 9e-09
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IID L+S
Sbjct: 270 SDPLHTTIIDTLSS 283
>gb|ABK95186.1| unknown [Populus trichocarpa]
Length = 142
Score = 58.5 bits (140), Expect(2) = 9e-09
Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEK+ T ARL +VAFLGFAVQA VTGKGPLNN
Sbjct: 78 PLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAWVTGKGPLNN 123
Score = 26.6 bits (57), Expect(2) = 9e-09
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IID L+S
Sbjct: 129 SDPLHTTIIDTLSS 142
>ref|XP_004147887.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Cucumis sativus]
gi|449516143|ref|XP_004165107.1| PREDICTED: chlorophyll
a-b binding protein CP29.2, chloroplastic-like [Cucumis
sativus]
Length = 284
Score = 57.4 bits (137), Expect(2) = 1e-08
Identities = 32/46 (69%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLA DPEK+ ARL +VAFLGFAVQAAVTGKGPLNN
Sbjct: 220 PLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNN 265
Score = 27.3 bits (59), Expect(2) = 1e-08
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IIDN +S
Sbjct: 271 SDPLHTTIIDNFSS 284
>gb|EMT21651.1| Chlorophyll a-b binding protein CP29.2, chloroplastic [Aegilops
tauschii]
Length = 286
Score = 60.1 bits (144), Expect(2) = 2e-08
Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEK+ T ARL +VAFLGFAVQAA TGKGPLNN
Sbjct: 221 PLGLAADPEKKETLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNN 266
Score = 23.9 bits (50), Expect(2) = 2e-08
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT I D L S
Sbjct: 272 SDPLHTTIFDTLGS 285
>gb|EMS60898.1| Chlorophyll a-b binding protein CP29.2, chloroplastic [Triticum
urartu]
Length = 206
Score = 60.1 bits (144), Expect(2) = 2e-08
Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEK+ T ARL +VAFLGFAVQAA TGKGPLNN
Sbjct: 141 PLGLAADPEKKETLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNN 186
Score = 23.9 bits (50), Expect(2) = 2e-08
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT I D L S
Sbjct: 192 SDPLHTTIFDTLGS 205
>ref|XP_003604653.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355505708|gb|AES86850.1| Chlorophyll a-b binding
protein [Medicago truncatula]
Length = 347
Score = 58.5 bits (140), Expect(2) = 2e-08
Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLA+DPEK+ T ARL +VAFLGFAVQAA TGKGPLNN
Sbjct: 282 PLGLASDPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNN 327
Score = 25.0 bits (53), Expect(2) = 2e-08
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IID +S
Sbjct: 333 SDPLHTTIIDTFSS 346
>ref|XP_002873005.1| chlorophyll a/b-binding protein CP29 [Arabidopsis lyrata subsp.
lyrata] gi|297318842|gb|EFH49264.1| chlorophyll
a/b-binding protein CP29 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 58.5 bits (140), Expect(2) = 2e-08
Identities = 33/46 (71%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEKR ARL +VAFLGFAVQAA TGKGPLNN
Sbjct: 226 PLGLAADPEKRAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNN 271
Score = 25.0 bits (53), Expect(2) = 2e-08
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IID +S
Sbjct: 277 SDPLHTTIIDTFSS 290
>gb|ACU19827.1| unknown [Glycine max]
Length = 290
Score = 58.5 bits (140), Expect(2) = 2e-08
Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLA+DPEK+ T ARL +V FLGFAVQAAVTGKGPLNN
Sbjct: 224 PLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNN 269
Score = 25.0 bits (53), Expect(2) = 2e-08
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IID +S
Sbjct: 275 SDPLHTTIIDTFSS 288
>gb|ACJ84724.1| unknown [Medicago truncatula] gi|388501002|gb|AFK38567.1| unknown
[Medicago truncatula]
Length = 289
Score = 58.5 bits (140), Expect(2) = 2e-08
Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLA+DPEK+ T ARL +VAFLGFAVQAA TGKGPLNN
Sbjct: 224 PLGLASDPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNN 269
Score = 25.0 bits (53), Expect(2) = 2e-08
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IID +S
Sbjct: 275 SDPLHTTIIDTFSS 288
>gb|ESR42597.1| hypothetical protein CICLE_v10012370mg [Citrus clementina]
Length = 288
Score = 59.7 bits (143), Expect(2) = 3e-08
Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEK+ T ARL +VAFLGFAVQA VTGKGPLNN
Sbjct: 224 PLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNN 269
Score = 23.5 bits (49), Expect(2) = 3e-08
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT I+D S
Sbjct: 275 SDPLHTTILDTFIS 288
>gb|ESR42596.1| hypothetical protein CICLE_v10012370mg [Citrus clementina]
Length = 288
Score = 59.7 bits (143), Expect(2) = 3e-08
Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEK+ T ARL +VAFLGFAVQA VTGKGPLNN
Sbjct: 224 PLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNN 269
Score = 23.5 bits (49), Expect(2) = 3e-08
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT I+D S
Sbjct: 275 SDPLHTTILDTFIS 288
>ref|XP_002279834.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic
[Vitis vinifera] gi|147784938|emb|CAN77492.1|
hypothetical protein VITISV_010727 [Vitis vinifera]
Length = 288
Score = 57.4 bits (137), Expect(2) = 3e-08
Identities = 31/46 (67%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEK+ ARL ++ FLGFAVQAAVTGKGPLNN
Sbjct: 223 PLGLAADPEKKAVLQLAEIKHARLAMIGFLGFAVQAAVTGKGPLNN 268
Score = 25.8 bits (55), Expect(2) = 3e-08
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 214 SDPLHTNIIDNL 249
SDPLHT IIDN+
Sbjct: 274 SDPLHTTIIDNV 285
>ref|XP_006289419.1| hypothetical protein CARUB_v10002918mg [Capsella rubella]
gi|482558125|gb|EOA22317.1| hypothetical protein
CARUB_v10002918mg [Capsella rubella]
Length = 286
Score = 58.5 bits (140), Expect(2) = 3e-08
Identities = 33/46 (71%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEKR ARL +VAFLGFAVQAA TGKGPLNN
Sbjct: 222 PLGLAADPEKRAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNN 267
Score = 24.6 bits (52), Expect(2) = 3e-08
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IID S
Sbjct: 273 SDPLHTTIIDTFNS 286
>ref|XP_004506774.1| PREDICTED: LOW QUALITY PROTEIN: chlorophyll a-b binding protein
CP29.1, chloroplastic-like [Cicer arietinum]
Length = 343
Score = 57.8 bits (138), Expect(2) = 4e-08
Identities = 32/46 (69%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +2
Query: 65 PLGLAADPEKRRTF--VGR*AARLPVVAFLGFAVQAAVTGKGPLNN 196
PLGLAADPEK+ ARL +VAFLGFAVQAA TGKGPLNN
Sbjct: 278 PLGLAADPEKKAVLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNN 323
Score = 25.0 bits (53), Expect(2) = 4e-08
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 214 SDPLHTNIIDNLTS 255
SDPLHT IID +S
Sbjct: 329 SDPLHTTIIDTFSS 342