BLASTX nr result

ID: Glycyrrhiza36_contig00037022 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00037022
         (209 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU50408.1 hypothetical protein TSUD_244550 [Trifolium subterran...    65   9e-11
GAU46403.1 hypothetical protein TSUD_28190 [Trifolium subterraneum]    60   3e-09
XP_003613114.1 PIF1 DNA helicase/replication A1-like protein, pu...    55   3e-08
XP_003595510.1 replication factor-A carboxy-terminal domain prot...    55   5e-07

>GAU50408.1 hypothetical protein TSUD_244550 [Trifolium subterraneum]
          Length = 340

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 30/50 (60%), Positives = 38/50 (76%)
 Frame = -3

Query: 204 MAAIHDSVSSIGPAKDNLSIVVKVVRLWTVTDMNRPNIKFSMEMVLMDDK 55
           MA  HD++S I PAK+N +++V+VVRLW V DM R  + FSMEMVLMD K
Sbjct: 1   MAPKHDAISEISPAKENWNLIVRVVRLWYVKDMARDKLPFSMEMVLMDSK 50


>GAU46403.1 hypothetical protein TSUD_28190 [Trifolium subterraneum]
          Length = 197

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 28/50 (56%), Positives = 37/50 (74%)
 Frame = -3

Query: 204 MAAIHDSVSSIGPAKDNLSIVVKVVRLWTVTDMNRPNIKFSMEMVLMDDK 55
           MA  HD++S I  AK+N +++V+VVRLW V DM R  + FSMEM+LMD K
Sbjct: 1   MAPKHDAISEISLAKENWNLIVRVVRLWYVKDMIRDKLPFSMEMMLMDSK 50


>XP_003613114.1 PIF1 DNA helicase/replication A1-like protein, putative [Medicago
           truncatula] AES96072.1 PIF1 DNA helicase/replication
           A1-like protein, putative [Medicago truncatula]
          Length = 96

 Score = 55.1 bits (131), Expect = 3e-08
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = -3

Query: 189 DSVSSIGPAKDNLSIVVKVVRLWTVTDMNRPNIKFSMEMVLMDDK 55
           D +S I P+K+N +I+V+VVRLW V D+ +    FS+EMVLMD+K
Sbjct: 6   DLISDISPSKENRTIIVRVVRLWFVRDIKKDQFPFSLEMVLMDNK 50


>XP_003595510.1 replication factor-A carboxy-terminal domain protein [Medicago
           truncatula] AES65761.1 replication factor-A
           carboxy-terminal domain protein [Medicago truncatula]
          Length = 549

 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 26/50 (52%), Positives = 36/50 (72%)
 Frame = -3

Query: 204 MAAIHDSVSSIGPAKDNLSIVVKVVRLWTVTDMNRPNIKFSMEMVLMDDK 55
           MA   D +S I P+K+N +I V+VVRLW V DM +  + +S+EMVLMD+K
Sbjct: 1   MAPKIDLISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMDNK 50


Top