BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00036004
         (556 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAW63130.1 31 kDa putative protein [Strawberry latent ringspot v...   149   3e-41
NP_620833.1 36 kDa protein [Strawberry latent ringspot virus sat...    99   2e-21

>AAW63130.1 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  149 bits (376), Expect = 3e-41
 Identities = 77/137 (56%), Positives = 92/137 (67%)
 Frame = -1

Query: 529 VAIPGQTPQEAASLSREFAKRALVFSGRRLMPVGLPEDHSTDPFASPLPRGPVPARRVVH 350
           V  PGQT  EA +L REF KR L FSGRRL   GLP    +DPFASP P  P    +V H
Sbjct: 153 VPCPGQTLPEAEALQREFHKRTLAFSGRRLSVSGLPS--GSDPFASPSPVRPALTPKVAH 210

Query: 349 VEPFTWDNMSYGQCSRTLALYKQLTSCFGSKMFQATLYKEAVKKVCKLTDAVPVSIPEFM 170
           V+P +W+ MS+GQCSR L LYKQL SCFG KMF ++LY  AV+KV +L +  PV+IPE  
Sbjct: 211 VDPVSWEGMSFGQCSRALTLYKQLCSCFGVKMFSSSLYGMAVRKVLRLREDFPVAIPENF 270

Query: 169 GRLGQVDFGAAPAHVYV 119
            RLGQVD  A   H++V
Sbjct: 271 ARLGQVDRDARAVHLFV 287


>NP_620833.1 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           pir||JQ2018 hypothetical 36.5K protein - strawberry
           latent ringspot virus [Strawberry latent ringspot virus]
           CAA49480.1 36 kDa protein [Strawberry latent ringspot
           virus satellite RNA]
          Length = 331

 Score = 99.0 bits (245), Expect = 2e-21
 Identities = 55/109 (50%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = -1

Query: 529 VAIPGQTPQEAASLSREFAKRALVFSGRRLMPVGLPEDHSTDPFASPLPR-GPVPARRVV 353
           V  PGQT  EA SL REF KRA  FSG+RL   GLPE     P  S L R       +  
Sbjct: 153 VPCPGQTLSEAESLQREFHKRAFAFSGKRLSVSGLPEG----PIPSLLLRQSACNCPKGC 208

Query: 352 HVEPFTWDNMSYGQCSRTLALYKQLTSCFGSKMFQATLYKEAVKKVCKL 206
           HV+P +W+ MS+GQCSR L LY+QL  CFG KMF ++LY  AV++   L
Sbjct: 209 HVDPVSWEGMSFGQCSRALTLYRQLCGCFGMKMFSSSLYGMAVRRFSAL 257