BLASTX nr result

ID: Glycyrrhiza36_contig00035941 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00035941
         (295 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU29525.1 hypothetical protein TSUD_115470 [Trifolium subterran...    62   4e-09
KYP61911.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]        55   1e-06
KOM58233.1 hypothetical protein LR48_Vigan11g126700 [Vigna angul...    54   2e-06
BAT97165.1 hypothetical protein VIGAN_09053500 [Vigna angularis ...    54   2e-06

>GAU29525.1 hypothetical protein TSUD_115470 [Trifolium subterraneum]
          Length = 1556

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 44/99 (44%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
 Frame = -1

Query: 295 QKSLSLIQAVSIARLFEDKFNPTKPSTSPIISNSKSLSTNTVTPNRSLSSQGSNTFSTSR 116
           Q   +L QAVS+ARLFE+KF PTK  T P++  SK  + N+    RS +SQG  +  T R
Sbjct: 215 QHPTTLGQAVSVARLFEEKFQPTKAVTQPLL--SKGPTYNSQYQARSTNSQGYTSNLTQR 272

Query: 115 -NSXXXXXXXXXXXXTAFNPKSPNIKSISPAEMQLRREK 2
            NS             A    + ++K ISPAEMQLRREK
Sbjct: 273 PNSTPLLPTPINRPPMA----NRSVKRISPAEMQLRREK 307


>KYP61911.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
          Length = 963

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
 Frame = -1

Query: 295 QKSLSLIQAVSIARLFEDKFNPTKPSTSPIISNSKSLSTNTVTPNRSLSSQGSNTFSTSR 116
           Q   SL++AVS+A+L+E+K++    ST P           T T +R L++  S   +T++
Sbjct: 147 QSPHSLLKAVSLAKLYEEKYST---STKPAY---------TTTYSRHLNTTPSPYLNTNQ 194

Query: 115 NSXXXXXXXXXXXXTAFN--PKSPNIKSISPAEMQLRREK 2
            +              F   PKSPNIK ISPAEMQ+RREK
Sbjct: 195 QTPSIPAILPNPSQKPFTHLPKSPNIKKISPAEMQIRREK 234


>KOM58233.1 hypothetical protein LR48_Vigan11g126700 [Vigna angularis]
          Length = 472

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = -1

Query: 283 SLIQAVSIARLFEDKFNPTKPSTSPIISNSKSLSTNTVTPNR-SLSSQGSNTFSTSRNSX 107
           SL++AV++A+LFE+K+NP   + +P+     S    T+ PNR S +++   + S  +++ 
Sbjct: 223 SLVKAVALAKLFEEKYNPPNAAKNPVYLPRSS----TIVPNRTSYNTKTDTSSSLPKSTL 278

Query: 106 XXXXXXXXXXXTAFNPKSPNIKSISPAEMQLRREK 2
                       +   K   I+ +SPAEMQLRREK
Sbjct: 279 PPLLPNPNIKPLSQTNKHHQIRKLSPAEMQLRREK 313


>BAT97165.1 hypothetical protein VIGAN_09053500 [Vigna angularis var.
           angularis]
          Length = 651

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = -1

Query: 283 SLIQAVSIARLFEDKFNPTKPSTSPIISNSKSLSTNTVTPNR-SLSSQGSNTFSTSRNSX 107
           SL++AV++A+LFE+K+NP   + +P+     S    T+ PNR S +++   + S  +++ 
Sbjct: 223 SLVKAVALAKLFEEKYNPPNAAKNPVYLPRSS----TIVPNRTSYNTKTDTSSSLPKSTL 278

Query: 106 XXXXXXXXXXXTAFNPKSPNIKSISPAEMQLRREK 2
                       +   K   I+ +SPAEMQLRREK
Sbjct: 279 PPLLPNPNIKPLSQTNKHHQIRKLSPAEMQLRREK 313


Top