BLASTX nr result
ID: Glycyrrhiza36_contig00034642
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza36_contig00034642
(285 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP41353.1 Copia protein, partial [Cajanus cajan] 99 3e-25
KYP68195.1 Copia protein [Cajanus cajan] 99 5e-25
KHN15285.1 Copia protein, partial [Glycine soja] 94 1e-23
KYP67097.1 Copia protein, partial [Cajanus cajan] 94 3e-23
KYP76195.1 Copia protein [Cajanus cajan] 98 3e-23
KHN31718.1 Copia protein, partial [Glycine soja] 96 2e-22
KHM99415.1 Copia protein, partial [Glycine soja] 96 2e-22
KYP71882.1 Copia protein [Cajanus cajan] 97 2e-22
KHN06176.1 Copia protein, partial [Glycine soja] 91 3e-22
KYP34555.1 Copia protein [Cajanus cajan] 96 3e-22
KHN37184.1 Copia protein, partial [Glycine soja] 89 1e-21
KHN34625.1 Retrovirus-related Pol polyprotein from transposon TN... 94 1e-21
KYP42770.1 Copia protein, partial [Cajanus cajan] 92 1e-21
KYP49740.1 Copia protein [Cajanus cajan] 94 1e-21
KYP39624.1 Copia protein, partial [Cajanus cajan] 89 2e-21
GAU43223.1 hypothetical protein TSUD_241130 [Trifolium subterran... 97 2e-21
XP_012486681.1 PREDICTED: LOW QUALITY PROTEIN: retrovirus-relate... 96 4e-21
KHN07989.1 Copia protein, partial [Glycine soja] 92 5e-21
KYP41281.1 Copia protein [Cajanus cajan] 88 6e-21
XP_003593657.1 Pol-like polyprotein/retrotransposon, putative [M... 91 8e-21
>KYP41353.1 Copia protein, partial [Cajanus cajan]
Length = 78
Score = 98.6 bits (244), Expect = 3e-25
Identities = 46/63 (73%), Positives = 51/63 (80%)
Frame = -3
Query: 280 FHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLDI 101
FHER KHIELDCHIV EKL G+IHLLPV S QLADI+TKP+ L PF +I SKLGM+DI
Sbjct: 15 FHERTKHIELDCHIVREKLNQGLIHLLPVPSAQQLADIYTKPLTLAPFRSIFSKLGMIDI 74
Query: 100 HLP 92
H P
Sbjct: 75 HSP 77
>KYP68195.1 Copia protein [Cajanus cajan]
Length = 97
Score = 98.6 bits (244), Expect = 5e-25
Identities = 46/63 (73%), Positives = 51/63 (80%)
Frame = -3
Query: 280 FHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLDI 101
FHER KHIELDCHIV EKL G+IHLLPV S QLADI+TKP+ L PF +I SKLGM+DI
Sbjct: 34 FHERTKHIELDCHIVREKLNQGLIHLLPVPSAQQLADIYTKPLTLAPFRSIFSKLGMIDI 93
Query: 100 HLP 92
H P
Sbjct: 94 HSP 96
>KHN15285.1 Copia protein, partial [Glycine soja]
Length = 73
Score = 94.4 bits (233), Expect = 1e-23
Identities = 40/64 (62%), Positives = 54/64 (84%)
Frame = -3
Query: 283 VFHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLD 104
+FHER KHIE+DCH++ EK+Q+G+IHLLPV+S AQLAD+ TKP+ F+++ SKLG+LD
Sbjct: 4 IFHERTKHIEIDCHVIREKIQTGLIHLLPVSSAAQLADVLTKPLPAPSFNSLISKLGLLD 63
Query: 103 IHLP 92
IH P
Sbjct: 64 IHSP 67
>KYP67097.1 Copia protein, partial [Cajanus cajan]
Length = 78
Score = 93.6 bits (231), Expect = 3e-23
Identities = 40/64 (62%), Positives = 52/64 (81%)
Frame = -3
Query: 283 VFHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLD 104
VFHER KHIE+DCH V EK +SG +HL+P+TS+ Q+AD+ TKP+A GPF + SKLGM D
Sbjct: 14 VFHERTKHIEIDCHTVREKFESGFLHLMPITSKEQVADVLTKPLASGPFQVLISKLGMYD 73
Query: 103 IHLP 92
I++P
Sbjct: 74 IYIP 77
>KYP76195.1 Copia protein [Cajanus cajan]
Length = 250
Score = 98.2 bits (243), Expect = 3e-23
Identities = 49/67 (73%), Positives = 53/67 (79%)
Frame = -3
Query: 280 FHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLDI 101
FHER KHIELDCHIV EKL SG+IHLLPV+S QLADI TKP+A F +I SKLGMLDI
Sbjct: 180 FHERTKHIELDCHIVREKLLSGLIHLLPVSSSNQLADILTKPLASSSFYHILSKLGMLDI 239
Query: 100 HLPA*RG 80
H PA G
Sbjct: 240 HSPACEG 246
>KHN31718.1 Copia protein, partial [Glycine soja]
Length = 249
Score = 96.3 bits (238), Expect = 2e-22
Identities = 45/75 (60%), Positives = 59/75 (78%)
Frame = -3
Query: 283 VFHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLD 104
+FHER KHIE+DCH++ EK+Q+G+IHLLPV+S AQLAD+ TKP+ F+++ SKLG+LD
Sbjct: 179 IFHERTKHIEIDCHVIREKIQTGLIHLLPVSSAAQLADVLTKPLPAPSFNSLISKLGLLD 238
Query: 103 IHLPA*RGC*S*LLH 59
IH PA G LLH
Sbjct: 239 IHSPACGG----LLH 249
>KHM99415.1 Copia protein, partial [Glycine soja]
Length = 249
Score = 96.3 bits (238), Expect = 2e-22
Identities = 45/75 (60%), Positives = 59/75 (78%)
Frame = -3
Query: 283 VFHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLD 104
+FHER KHIE+DCH++ EK+Q+G+IHLLPV+S AQLAD+ TKP+ F+++ SKLG+LD
Sbjct: 179 IFHERTKHIEIDCHVIREKIQTGLIHLLPVSSAAQLADVLTKPLPAPSFNSLISKLGLLD 238
Query: 103 IHLPA*RGC*S*LLH 59
IH PA G LLH
Sbjct: 239 IHSPACGG----LLH 249
>KYP71882.1 Copia protein [Cajanus cajan]
Length = 279
Score = 96.7 bits (239), Expect = 2e-22
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = -3
Query: 283 VFHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLD 104
VFHER KHIE+DCH + EK+Q+GI+HLLPV S QLAD+FTKP+A GPF SKLGM +
Sbjct: 215 VFHERTKHIEIDCHSIREKVQAGIVHLLPVRSAHQLADVFTKPLASGPFHLNISKLGMCN 274
Query: 103 IHLPA 89
IHLPA
Sbjct: 275 IHLPA 279
>KHN06176.1 Copia protein, partial [Glycine soja]
Length = 69
Score = 90.9 bits (224), Expect = 3e-22
Identities = 40/63 (63%), Positives = 53/63 (84%)
Frame = -3
Query: 283 VFHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLD 104
VFHER KHIE++CH+V +K+QS +IHLLP+++ QLADI TKP+ G F++I SKLGMLD
Sbjct: 7 VFHERTKHIEINCHVVRDKVQSDLIHLLPISTYEQLADILTKPLHAGLFNHIHSKLGMLD 66
Query: 103 IHL 95
IH+
Sbjct: 67 IHI 69
>KYP34555.1 Copia protein [Cajanus cajan]
Length = 246
Score = 95.5 bits (236), Expect = 3e-22
Identities = 47/63 (74%), Positives = 51/63 (80%)
Frame = -3
Query: 280 FHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLDI 101
FHER KHIELDCHIV EKL SG+IHLLPV+S QLADI TKP+A FS+I SKL MLDI
Sbjct: 180 FHERTKHIELDCHIVREKLLSGLIHLLPVSSSNQLADILTKPLASSSFSHILSKLDMLDI 239
Query: 100 HLP 92
H P
Sbjct: 240 HSP 242
>KHN37184.1 Copia protein, partial [Glycine soja]
Length = 65
Score = 89.4 bits (220), Expect = 1e-21
Identities = 40/61 (65%), Positives = 48/61 (78%)
Frame = -3
Query: 280 FHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLDI 101
FHE KHI+LDCHIV EKL G+IHLLPV S QL DI+TKP+ L PF +I SK+GM++I
Sbjct: 5 FHEHTKHIKLDCHIVREKLDQGLIHLLPVPSTQQLTDIYTKPLTLAPFGSIFSKMGMINI 64
Query: 100 H 98
H
Sbjct: 65 H 65
>KHN34625.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 215
Score = 93.6 bits (231), Expect = 1e-21
Identities = 41/64 (64%), Positives = 54/64 (84%)
Frame = -3
Query: 283 VFHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLD 104
VFHERIKHIE+DCH+V +K+QSG+IHLLP+++ QL DI TK + + F++I SKLGMLD
Sbjct: 152 VFHERIKHIEMDCHVVRDKVQSGMIHLLPISTHEQLTDILTKSLHVDLFNHIHSKLGMLD 211
Query: 103 IHLP 92
IH+P
Sbjct: 212 IHIP 215
>KYP42770.1 Copia protein, partial [Cajanus cajan]
Length = 166
Score = 92.0 bits (227), Expect = 1e-21
Identities = 42/68 (61%), Positives = 53/68 (77%)
Frame = -3
Query: 283 VFHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLD 104
VFHER KHIE+DCH+V EKLQ+G+ HLLP+ S QLADI TKP+ PF + SKLG+++
Sbjct: 87 VFHERTKHIEIDCHLVREKLQAGLFHLLPIASSHQLADILTKPLDPSPFQYLLSKLGVIN 146
Query: 103 IHLPA*RG 80
I+ PA RG
Sbjct: 147 IYSPACRG 154
>KYP49740.1 Copia protein [Cajanus cajan]
Length = 248
Score = 94.0 bits (232), Expect = 1e-21
Identities = 40/62 (64%), Positives = 52/62 (83%)
Frame = -3
Query: 283 VFHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLD 104
VFHER KHIE+DCH+V +K+QSG +HLLP+++Q Q+ADI TKP+ LGPF + KLGML+
Sbjct: 179 VFHERTKHIEMDCHLVRDKVQSGTLHLLPISTQDQIADILTKPLHLGPFQTLHHKLGMLN 238
Query: 103 IH 98
IH
Sbjct: 239 IH 240
>KYP39624.1 Copia protein, partial [Cajanus cajan]
Length = 93
Score = 89.4 bits (220), Expect = 2e-21
Identities = 40/68 (58%), Positives = 52/68 (76%)
Frame = -3
Query: 283 VFHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLD 104
VFHER KHIE+DCH+V EKLQ+G+ HLLP+ S QLADI TKP+ PF + SK+G+++
Sbjct: 14 VFHERTKHIEIDCHLVREKLQAGLFHLLPIASSHQLADILTKPLDPSPFQYLFSKMGVIN 73
Query: 103 IHLPA*RG 80
I+ P RG
Sbjct: 74 IYSPTCRG 81
>GAU43223.1 hypothetical protein TSUD_241130 [Trifolium subterraneum]
Length = 902
Score = 96.7 bits (239), Expect = 2e-21
Identities = 44/61 (72%), Positives = 53/61 (86%)
Frame = -3
Query: 283 VFHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLD 104
VFHER KHIE+DCHIV EK+QSG+IHLLPV S+ Q+ADI TKP+ GPF+ +QSKLGM+D
Sbjct: 827 VFHERTKHIEMDCHIVREKVQSGLIHLLPVPSKEQVADILTKPLHPGPFNGLQSKLGMID 886
Query: 103 I 101
I
Sbjct: 887 I 887
>XP_012486681.1 PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Gossypium raimondii]
Length = 683
Score = 95.9 bits (237), Expect = 4e-21
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = -3
Query: 280 FHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLDI 101
FHER KHIE+DCHIV EKLQ I+HLLP TS AQLAD+FTK +A PF ++ SKLGML+I
Sbjct: 620 FHERTKHIEIDCHIVREKLQKDIVHLLPCTSSAQLADLFTKALAAQPFQDMISKLGMLNI 679
Query: 100 HLPA 89
H PA
Sbjct: 680 HSPA 683
>KHN07989.1 Copia protein, partial [Glycine soja]
Length = 220
Score = 92.0 bits (227), Expect = 5e-21
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = -3
Query: 280 FHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLDI 101
FHER KHIELDCHI+ EKLQS +IHLLPV SQ+QLAD+FTKP+ FS++ SKLG+ I
Sbjct: 158 FHERSKHIELDCHIIREKLQSKLIHLLPVPSQSQLADVFTKPLHSPSFSSMMSKLGLCSI 217
Query: 100 HLP 92
H P
Sbjct: 218 HHP 220
>KYP41281.1 Copia protein [Cajanus cajan]
Length = 93
Score = 88.2 bits (217), Expect = 6e-21
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = -3
Query: 280 FHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLDI 101
FHER KHIE+DCH++ ++QSG+IHLLP++S +Q+AD FTK + PF N SKLGM DI
Sbjct: 30 FHERTKHIEVDCHVIRARIQSGLIHLLPISSASQVADTFTKSLHAHPFQNALSKLGMYDI 89
Query: 100 HLP 92
H P
Sbjct: 90 HSP 92
>XP_003593657.1 Pol-like polyprotein/retrotransposon, putative [Medicago
truncatula] AES63908.1 Pol-like
polyprotein/retrotransposon, putative [Medicago
truncatula]
Length = 201
Score = 90.9 bits (224), Expect = 8e-21
Identities = 39/62 (62%), Positives = 53/62 (85%)
Frame = -3
Query: 283 VFHERIKHIELDCHIVGEKLQSGIIHLLPVTSQAQLADIFTKPMALGPFSNIQSKLGMLD 104
VFHER KHIE+DCH+V +K+Q+G+IHLLPV+S+ Q+ADIFT+P+ GPF+ +Q KLG +
Sbjct: 131 VFHERTKHIEIDCHVVRDKVQAGLIHLLPVSSKEQVADIFTRPLHHGPFNTLQIKLGTII 190
Query: 103 IH 98
IH
Sbjct: 191 IH 192